Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|020360
Gene name
Locationscaffold_10:1508592..1509876
Strand+
Gene length (bp)1284
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12271 Chs7 Chitin synthase export chaperone 2.0E-63 4 304

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4IJ79|CHS7_GIBZE Chitin synthase export chaperone OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CHS7 PE=3 SV=2 1 307 1.0E-11
sp|Q6CRM6|CHS7_KLULA Chitin synthase export chaperone OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CHS7 PE=3 SV=1 4 307 2.0E-11
sp|Q5YCW8|CHS7_FUSO4 Chitin synthase export chaperone OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=chs7 PE=3 SV=1 1 307 2.0E-10
sp|Q1DKX4|CHS7_COCIM Chitin synthase export chaperone OS=Coccidioides immitis (strain RS) GN=CHS7 PE=3 SV=1 4 307 4.0E-10
sp|Q2H7Q1|CHS7_CHAGB Chitin synthase export chaperone OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CHS7 PE=3 SV=1 46 307 7.0E-10
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Swissprot ID Swissprot Description Start End E-value
sp|Q4IJ79|CHS7_GIBZE Chitin synthase export chaperone OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CHS7 PE=3 SV=2 1 307 1.0E-11
sp|Q6CRM6|CHS7_KLULA Chitin synthase export chaperone OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CHS7 PE=3 SV=1 4 307 2.0E-11
sp|Q5YCW8|CHS7_FUSO4 Chitin synthase export chaperone OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=chs7 PE=3 SV=1 1 307 2.0E-10
sp|Q1DKX4|CHS7_COCIM Chitin synthase export chaperone OS=Coccidioides immitis (strain RS) GN=CHS7 PE=3 SV=1 4 307 4.0E-10
sp|Q2H7Q1|CHS7_CHAGB Chitin synthase export chaperone OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CHS7 PE=3 SV=1 46 307 7.0E-10
sp|Q5BEG1|CHS7_EMENI Chitin synthase export chaperone OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chs7 PE=3 SV=1 4 307 1.0E-09
sp|Q6MYT0|CHS7_ASPFU Chitin synthase export chaperone OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chs7 PE=3 SV=1 4 307 1.0E-09
sp|P0CM72|CHS7_CRYNJ Chitin synthase export chaperone OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CHS7 PE=3 SV=1 3 307 2.0E-09
sp|P0CM73|CHS7_CRYNB Chitin synthase export chaperone OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CHS7 PE=3 SV=1 3 307 2.0E-09
sp|Q6C8U1|CHS7_YARLI Chitin synthase export chaperone OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CHS7 PE=3 SV=1 83 307 3.0E-09
sp|Q7SB92|CHS7_NEUCR Chitin synthase export chaperone OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csc-1 PE=3 SV=1 1 307 6.0E-09
sp|A1CPR8|CHS7_ASPCL Chitin synthase export chaperone OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=chs7 PE=3 SV=1 74 307 2.0E-08
sp|Q2UNJ0|CHS7_ASPOR Chitin synthase export chaperone OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=chs7 PE=3 SV=1 4 307 4.0E-08
sp|Q0UDX8|CHS7_PHANO Chitin synthase export chaperone OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=CHS7 PE=3 SV=1 67 307 2.0E-07
sp|Q6BUS8|CHS7_DEBHA Chitin synthase export chaperone OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CHS7 PE=3 SV=1 4 307 7.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

Domain # Start End Length
1 66 85 19
2 98 120 22
3 126 148 22
4 161 183 22
5 205 227 22
6 240 259 19
7 274 296 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|020360
MNRFGEYKELCKHASSYALCNLFYLQIQREAPDLLGSASQRPFAPVGINPVCGIPKLDTDGSHSNLANNVLCGVS
IIMTLGFLWGCQKRIAAVGRVEFRAFLVTYFVSLVFQLVTAGALLEQGTRAIGVLTAIHTGIVSAMFWTLLWYAI
TTTQILDDGGFGSLIVMHVGQLAFFVVTLYISLDTAFGFTSTFGTLSHPPDSLRSIPLFVLTSIWPAAAALGSFL
VITYVVVRVLHERRPVYIYFAAAFAFIVAQVFRLSPVGRSICQSSDMRVDASFIATFLETVSIVVMYYAWADMTK
ASWDEFSY*
Coding >Agabi119p4|020360
ATGAATCGTTTCGGCGAATACAAGGAGCTATGCAAGCATGCGTCCAGTTACGCTCTTTGCAACTTGTTCTACCTC
CAGATACAACGGGAAGCTCCTGATCTTCTCGGGAGCGCAAGTCAACGACCGTTCGCTCCCGTAGGCATCAATCCT
GTGTGTGGTATCCCGAAACTCGACACCGATGGTTCCCACTCAAACCTTGCGAACAACGTTCTCTGTGGGGTAAGC
ATCATCATGACCTTGGGATTCTTGTGGGGATGTCAGAAACGAATAGCGGCTGTTGGACGAGTGGAATTTCGAGCA
TTTCTTGTGACATATTTCGTGTCACTGGTCTTTCAGCTGGTCACCGCAGGAGCTCTATTAGAACAGGGAACGCGG
GCCATAGGCGTGTTAACCGCTATTCATACTGGTATTGTATCAGCTATGTTCTGGACGCTCTTATGGTACGCCATC
ACGACAACTCAGATATTGGATGACGGGGGATTCGGGAGTCTGATAGTAATGCATGTTGGACAACTTGCATTCTTC
GTCGTGACCCTCTATATCAGCCTTGATACTGCTTTTGGGTTTACATCAACTTTCGGTACCCTTTCCCATCCCCCA
GACTCATTGCGGAGTATCCCGTTGTTCGTATTGACAAGCATATGGCCCGCAGCCGCGGCTTTGGGATCCTTCCTC
GTTATTACCTACGTTGTCGTCCGCGTTCTTCATGAAAGACGACCAGTATACATATACTTCGCTGCAGCCTTCGCC
TTCATTGTTGCACAAGTATTCAGATTGAGTCCTGTGGGACGATCAATCTGTCAGTCATCAGACATGCGAGTCGAT
GCATCGTTTATTGCAACTTTCTTGGAGACGGTATCGATTGTGGTTATGTATTATGCTTGGGCGGATATGACTAAA
GCTTCCTGGGACGAATTTAGCTATTGA
Transcript >Agabi119p4|020360
ATGAATCGTTTCGGCGAATACAAGGAGCTATGCAAGCATGCGTCCAGTTACGCTCTTTGCAACTTGTTCTACCTC
CAGATACAACGGGAAGCTCCTGATCTTCTCGGGAGCGCAAGTCAACGACCGTTCGCTCCCGTAGGCATCAATCCT
GTGTGTGGTATCCCGAAACTCGACACCGATGGTTCCCACTCAAACCTTGCGAACAACGTTCTCTGTGGGGTAAGC
ATCATCATGACCTTGGGATTCTTGTGGGGATGTCAGAAACGAATAGCGGCTGTTGGACGAGTGGAATTTCGAGCA
TTTCTTGTGACATATTTCGTGTCACTGGTCTTTCAGCTGGTCACCGCAGGAGCTCTATTAGAACAGGGAACGCGG
GCCATAGGCGTGTTAACCGCTATTCATACTGGTATTGTATCAGCTATGTTCTGGACGCTCTTATGGTACGCCATC
ACGACAACTCAGATATTGGATGACGGGGGATTCGGGAGTCTGATAGTAATGCATGTTGGACAACTTGCATTCTTC
GTCGTGACCCTCTATATCAGCCTTGATACTGCTTTTGGGTTTACATCAACTTTCGGTACCCTTTCCCATCCCCCA
GACTCATTGCGGAGTATCCCGTTGTTCGTATTGACAAGCATATGGCCCGCAGCCGCGGCTTTGGGATCCTTCCTC
GTTATTACCTACGTTGTCGTCCGCGTTCTTCATGAAAGACGACCAGTATACATATACTTCGCTGCAGCCTTCGCC
TTCATTGTTGCACAAGTATTCAGATTGAGTCCTGTGGGACGATCAATCTGTCAGTCATCAGACATGCGAGTCGAT
GCATCGTTTATTGCAACTTTCTTGGAGACGGTATCGATTGTGGTTATGTATTATGCTTGGGCGGATATGACTAAA
GCTTCCTGGGACGAATTTAGCTATTGA
Gene >Agabi119p4|020360
ATGAATCGTTTCGGCGAATACAAGGAGCTATGCAAGCATGCGTCCAGTTACGCTCTTTGCAACTTGTTCTACCTC
CAGGTTCGTTTTGGGTTCAGTTTTCCCCGAGCCAGGATTGCTTGAAAATGGATTAATTTCAGATACAACGGGAAG
CTCCTGATCTTCTCGGGAGCGCAAGTCAACGACCGTTCGCTCCCGTAGGCATCAATCCTGTGTGTGGTATCCCGA
AACTCGACACCGATGGTTCCCACTCAAACCTTGCGAACAACGTTCTCTGTGGGGTAAGCATCATCATGACCTTGG
GATTCTTGTGGGGATGTCAGAAACGAATAGCGGCTGTTGGTATGTTGTTTCCCTCAATTAGCGAACCCCGCTCAC
AATCTTGGTGACTAAAAGGACGAGTGGAATTTCGAGCATTTCTTGTGACATATTTCGTGTCACTGGTCTTTCAGC
TGGTCACCGCAGGAGCTCTATTAGAACAGGGAACGCGGGCCATAGGCGTGTTAACCGCTATTCATACTGGTATTG
TATCAGCTATGTTCTGGACGCTCTTATGGTACGCCATCACGACAACTCAGATATTGGATGACGGGGGATTCGGGA
GTCTGATAGTGAGTTCTTGATCGGGTTTTCTTTTTAACTCATGTGCTAAACTCCGTCTAGGTAATGCATGTTGGA
CAACTTGCATTCTTCGTCGTGACCCTCTATATCAGCCTTGATACTGCTTTTGGGTTTACATCAACTTTCGGTACC
CTTTCCCATCCCCCAGACTCATTGCGGAGTATCCCGTTGTTCGTATTGACAAGCATATGGCCCGCAGCGTGGGTG
TTTTACCTTTTGTAAGAGAAACACTAAGCTTATTCTTGAAAACTTTTCTCAGCGCGGCTTTGGGATCCTTCCTCG
TTATTACCTACGTTGTCGTCCGCGTTCTTCATGAAAGACGACCAGTATACATATACTTCGCTGCAGCCTTCGCCT
TCATTGTTGCACAAGTATTCAGATTGAGTCCTGTGGGACGATCAATCTGTCAGGTACGTAAACCTTCCATCATTG
TAATCCTTGATGAAACAAACTAATTTAGTTTTCTTTTGACAGTCATCAGACATGCGAGTCGATGCATCGTTTATT
GCAACTTTCTTGGAGACGGTATCGATTGTGGTTATGTATTATGCTTGGGCGGATATGACTAAAGGTGAGTGGGAG
GACTTTTTTTGAACGTGGTGGAGGACTGGATACTAAAAAAACTCTTTTTCTTTTTTAGCTTCCTGGGACGAATTT
AGCTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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