Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|017000
Gene name
Locationscaffold_10:1181449..1182750
Strand+
Gene length (bp)1301
Transcript length (bp)1248
Coding sequence length (bp)1248
Protein length (aa) 416

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07470 Glyco_hydro_88 Glycosyl Hydrolase Family 88 1.2E-14 139 258

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|017000
MFPSQYHLTSPLLLFFLVSSIQSLKLSHPSSKFPFTHDPGFDIEKVAALGKSLPSHSWEYGTAAEALLELYDPEI
SVFSPSFLSKTSRYLRTHRGRIRSLEYAADVITLGTDQNALSHGGGAIADPASLGVSAILLGDYLKEGEKFADAA
TEQMGFTVGEAPRWENGAISHRLEAPELWADFVYMAPPFLAYYGLYNENLTLLEESVEQCRLYRQVLQASGGGLW
RHIVGPSSPDPGLWSTGNAWAAAGMTRILAAVTNTPKSVFGKDTEKKYTRWRSDAIESLTGYITEILEGAIAAPK
DDGLLRNYLDDTSGGGHGFGEISGSTLLASVVYRMAVLQPKVFAKRGSEYLNWADGIMKTMGKGGHITENGTATP
AVNPLAWQDTKPFTTGSPEGQNFVVLMYVAWRDCVDAGIC*
Coding >Agabi119p4|017000
ATGTTCCCATCTCAATACCATCTAACATCTCCCCTCCTCCTATTTTTCCTCGTTTCCTCAATCCAATCTTTAAAA
CTCTCTCATCCTTCCTCAAAATTCCCATTTACTCATGATCCCGGTTTCGATATCGAAAAGGTCGCAGCTCTAGGC
AAATCATTGCCTTCTCATTCCTGGGAATATGGCACAGCAGCAGAAGCTCTCCTCGAACTCTACGATCCTGAAATC
TCCGTATTCTCACCCTCCTTCCTCTCCAAAACCAGTCGATATCTGAGAACTCATCGAGGACGAATTCGTTCATTG
GAATACGCCGCAGATGTCATCACCCTTGGCACAGATCAAAATGCTCTATCACACGGTGGCGGTGCTATTGCTGAT
CCTGCGAGTCTGGGTGTAAGCGCTATTTTGTTGGGAGATTATTTGAAAGAGGGTGAGAAATTTGCTGATGCTGCG
ACGGAGCAAATGGGTTTTACGGTTGGTGAAGCGCCGAGATGGGAGAATGGGGCGATATCGCATAGACTTGAGGCG
CCTGAATTATGGGCGGATTTTGTTTACATGGCCCCGCCGTTCCTGGCGTATTATGGGCTTTACAATGAAAATTTG
ACGCTGTTGGAGGAATCGGTAGAGCAGTGTAGGTTATATCGTCAAGTGCTGCAAGCTTCTGGTGGTGGATTATGG
CGACACATTGTCGGTCCTTCGTCACCCGACCCTGGTCTATGGTCAACGGGAAACGCATGGGCAGCTGCAGGAATG
ACACGAATCTTAGCCGCTGTCACCAACACTCCCAAATCCGTCTTTGGTAAAGATACCGAAAAGAAATATACTCGA
TGGAGGTCAGACGCTATTGAGTCGTTGACCGGCTATATCACCGAAATTTTGGAAGGAGCGATAGCGGCGCCGAAA
GATGATGGTTTATTGAGGAATTACCTGGACGATACTTCAGGTGGTGGACATGGTTTTGGTGAGATTTCAGGGAGC
ACTTTGTTGGCGAGTGTGGTGTATAGGATGGCTGTTCTGCAACCAAAGGTGTTTGCGAAGAGGGGGAGTGAGTAT
TTGAATTGGGCGGATGGGATTATGAAGACTATGGGTAAGGGTGGGCATATTACGGAAAATGGGACGGCGACGCCT
GCTGTGAATCCTCTTGCATGGCAGGACACGAAGCCATTTACTACTGGGAGTCCAGAGGGCCAGAATTTTGTAGTG
TTGATGTATGTGGCCTGGAGGGACTGCGTTGATGCGGGAATCTGCTAG
Transcript >Agabi119p4|017000
ATGTTCCCATCTCAATACCATCTAACATCTCCCCTCCTCCTATTTTTCCTCGTTTCCTCAATCCAATCTTTAAAA
CTCTCTCATCCTTCCTCAAAATTCCCATTTACTCATGATCCCGGTTTCGATATCGAAAAGGTCGCAGCTCTAGGC
AAATCATTGCCTTCTCATTCCTGGGAATATGGCACAGCAGCAGAAGCTCTCCTCGAACTCTACGATCCTGAAATC
TCCGTATTCTCACCCTCCTTCCTCTCCAAAACCAGTCGATATCTGAGAACTCATCGAGGACGAATTCGTTCATTG
GAATACGCCGCAGATGTCATCACCCTTGGCACAGATCAAAATGCTCTATCACACGGTGGCGGTGCTATTGCTGAT
CCTGCGAGTCTGGGTGTAAGCGCTATTTTGTTGGGAGATTATTTGAAAGAGGGTGAGAAATTTGCTGATGCTGCG
ACGGAGCAAATGGGTTTTACGGTTGGTGAAGCGCCGAGATGGGAGAATGGGGCGATATCGCATAGACTTGAGGCG
CCTGAATTATGGGCGGATTTTGTTTACATGGCCCCGCCGTTCCTGGCGTATTATGGGCTTTACAATGAAAATTTG
ACGCTGTTGGAGGAATCGGTAGAGCAGTGTAGGTTATATCGTCAAGTGCTGCAAGCTTCTGGTGGTGGATTATGG
CGACACATTGTCGGTCCTTCGTCACCCGACCCTGGTCTATGGTCAACGGGAAACGCATGGGCAGCTGCAGGAATG
ACACGAATCTTAGCCGCTGTCACCAACACTCCCAAATCCGTCTTTGGTAAAGATACCGAAAAGAAATATACTCGA
TGGAGGTCAGACGCTATTGAGTCGTTGACCGGCTATATCACCGAAATTTTGGAAGGAGCGATAGCGGCGCCGAAA
GATGATGGTTTATTGAGGAATTACCTGGACGATACTTCAGGTGGTGGACATGGTTTTGGTGAGATTTCAGGGAGC
ACTTTGTTGGCGAGTGTGGTGTATAGGATGGCTGTTCTGCAACCAAAGGTGTTTGCGAAGAGGGGGAGTGAGTAT
TTGAATTGGGCGGATGGGATTATGAAGACTATGGGTAAGGGTGGGCATATTACGGAAAATGGGACGGCGACGCCT
GCTGTGAATCCTCTTGCATGGCAGGACACGAAGCCATTTACTACTGGGAGTCCAGAGGGCCAGAATTTTGTAGTG
TTGATGTATGTGGCCTGGAGGGACTGCGTTGATGCGGGAATCTGCTAG
Gene >Agabi119p4|017000
ATGTTCCCATCTCAATACCATCTAACATCTCCCCTCCTCCTATTTTTCCTCGTTTCCTCAATCCAATCTTTAAAA
CTCTCTCATCCTTCCTCAAAATTCCCATTTACTCATGATCCCGGTTTCGATATCGAAAAGGTCGCAGCTCTAGGC
AAATCATTGCCTTCTCATTCCTGGGAATATGGCACAGCAGCAGAAGCTCTCCTCGAACTCTACGATCCTGAAATC
TCCGTATTCTCACCCTCCTTCCTCTCCAAAACCAGTCGATATCTGAGAACTCATCGAGGACGAATTCGTTCATTG
GAATACGCCGCAGATGTCATCACCCTTGGCACAGATCAAAATGCTCTATCACACGGTGGCGGTGCTATTGCTGAT
CCTGCGAGTCTGGGTGTAAGCGCTATTTTGTTGGGAGATTATTTGAAAGAGGGTGAGAAATTTGCTGATGCTGCG
ACGGAGCAAATGGGTTTTACGGTTGGTGAAGCGCCGAGATGGGAGAATGGGGCGATATCGCATAGACTTGAGGCG
CCTGAATTATGGTACGCATCATCGTATAATCTTAATTCCTGTTTCTAATAATAGTTCTTTTAAGGGCGGATTTTG
TTTACATGGCCCCGCCGTTCCTGGCGTATTATGGGCTTTACAATGAAAATTTGACGCTGTTGGAGGAATCGGTAG
AGCAGTGTAGGTTATATCGTCAAGTGCTGCAAGCTTCTGGTGGTGGATTATGGCGACACATTGTCGGTCCTTCGT
CACCCGACCCTGGTCTATGGTCAACGGGAAACGCATGGGCAGCTGCAGGAATGACACGAATCTTAGCCGCTGTCA
CCAACACTCCCAAATCCGTCTTTGGTAAAGATACCGAAAAGAAATATACTCGATGGAGGTCAGACGCTATTGAGT
CGTTGACCGGCTATATCACCGAAATTTTGGAAGGAGCGATAGCGGCGCCGAAAGATGATGGTTTATTGAGGAATT
ACCTGGACGATACTTCAGGTGGTGGACATGGTTTTGGTGAGATTTCAGGGAGCACTTTGTTGGCGAGTGTGGTGT
ATAGGATGGCTGTTCTGCAACCAAAGGTGTTTGCGAAGAGGGGGAGTGAGTATTTGAATTGGGCGGATGGGATTA
TGAAGACTATGGGTAAGGGTGGGCATATTACGGAAAATGGGACGGCGACGCCTGCTGTGAATCCTCTTGCATGGC
AGGACACGAAGCCATTTACTACTGGGAGTCCAGAGGGCCAGAATTTTGTAGTGTTGATGTATGTGGCCTGGAGGG
ACTGCGTTGATGCGGGAATCTGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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