Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|015750
Gene name
Locationscaffold_10:249502..251012
Strand+
Gene length (bp)1510
Transcript length (bp)1398
Coding sequence length (bp)1398
Protein length (aa) 466

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13640 2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily 9.6E-10 134 226

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|015750
MSTLTDDITIQTLRDSLVDKHNLHEPWTSGVISLSEPEKTLFYETEDGVPRSLKLGLNNQDEVRNLSDVCQPATF
GLNKEDVLDETYRKAGKLDGDRFAWRFNPSDKSNFANQLAAALFPWETLNSGIRFEPYKLNVYGQGSFFKTHKDT
PRDENMFASLVIVLPFKHEGGELLLRHRGRELVFNGQALIDDAPAASVAYVAFFSDVEHEVARVSSGYRVTVTYN
LYFDPSRRAPSARISNDSKLEHPFKTELRRVMEDAVIRDAHPVLGFGLEHAYPFEAAIHRMDALKLKGTDAVLIK
VFKELGIHYDFFLLYREDEEDLYCPFRILTRNIIDGDESYNQDVVERIVDRGAWLVWQESPSEIIPDVPIVFGEF
RSIVTARPSVPSLEVEWVTEPNEEHVDGSPMLIYGNEVSIGSQYHQLCVIARFFPLSLEINLIETLSSLSSCINM
GNGYFMGPRRVKLVR*
Coding >Agabi119p4|015750
ATGAGCACTTTAACAGACGATATCACGATTCAAACACTCCGAGATTCTCTCGTCGACAAGCATAATTTGCATGAG
CCCTGGACTTCGGGTGTTATATCTCTATCAGAGCCTGAAAAAACTCTCTTTTACGAAACAGAAGACGGAGTTCCA
AGGTCTCTCAAATTGGGTTTGAACAATCAAGATGAGGTCAGAAATCTTAGTGACGTCTGCCAACCGGCAACTTTC
GGACTCAACAAGGAGGATGTCCTTGATGAGACTTATCGCAAGGCCGGAAAATTGGACGGTGACAGATTTGCCTGG
CGTTTCAATCCCTCTGATAAGAGTAACTTTGCCAATCAGCTAGCAGCAGCTCTTTTCCCATGGGAAACCCTCAAC
AGCGGTATTCGTTTCGAACCCTATAAGCTCAATGTGTATGGACAGGGCTCGTTCTTTAAGACCCACAAGGACACC
CCTCGTGATGAAAATATGTTTGCTTCTCTTGTTATTGTTTTGCCTTTCAAGCATGAGGGCGGAGAACTCCTGCTC
AGGCACCGGGGTCGTGAACTCGTCTTTAATGGCCAGGCTCTAATTGACGATGCACCTGCAGCTTCTGTGGCGTAT
GTTGCATTTTTCAGCGACGTTGAGCATGAAGTCGCCCGAGTATCATCTGGGTATAGGGTTACGGTGACCTACAAT
CTATACTTCGACCCGTCGAGGCGTGCTCCCTCCGCTCGTATTTCAAATGATTCGAAATTGGAACACCCATTTAAA
ACCGAATTAAGAAGGGTCATGGAAGATGCTGTCATCAGAGATGCTCACCCCGTCCTTGGTTTTGGCCTTGAACAC
GCTTATCCATTCGAGGCAGCAATCCACCGAATGGATGCCCTGAAACTGAAAGGCACTGACGCAGTCCTCATCAAA
GTGTTCAAAGAACTCGGGATTCACTATGATTTCTTCCTGTTATATCGCGAGGATGAGGAGGACCTGTATTGTCCC
TTTCGTATTCTGACTCGCAACATTATTGATGGTGATGAAAGCTATAATCAAGATGTTGTGGAAAGGATCGTGGAT
AGAGGCGCATGGTTGGTATGGCAAGAGAGTCCAAGCGAGATAATTCCGGACGTGCCAATAGTATTTGGTGAATTT
CGCTCCATCGTTACCGCAAGGCCATCCGTTCCAAGCCTGGAGGTAGAATGGGTTACTGAACCGAACGAAGAACAT
GTGGACGGTTCCCCTATGCTGATTTATGGAAATGAGGTATCAATAGGATCTCAGTATCACCAGCTTTGTGTCATT
GCTCGGTTCTTCCCTCTCTCCTTAGAAATTAATCTGATTGAGACTTTATCATCTTTATCATCTTGTATAAATATG
GGGAATGGATATTTTATGGGTCCTCGTCGAGTCAAGCTCGTTAGATGA
Transcript >Agabi119p4|015750
ATGAGCACTTTAACAGACGATATCACGATTCAAACACTCCGAGATTCTCTCGTCGACAAGCATAATTTGCATGAG
CCCTGGACTTCGGGTGTTATATCTCTATCAGAGCCTGAAAAAACTCTCTTTTACGAAACAGAAGACGGAGTTCCA
AGGTCTCTCAAATTGGGTTTGAACAATCAAGATGAGGTCAGAAATCTTAGTGACGTCTGCCAACCGGCAACTTTC
GGACTCAACAAGGAGGATGTCCTTGATGAGACTTATCGCAAGGCCGGAAAATTGGACGGTGACAGATTTGCCTGG
CGTTTCAATCCCTCTGATAAGAGTAACTTTGCCAATCAGCTAGCAGCAGCTCTTTTCCCATGGGAAACCCTCAAC
AGCGGTATTCGTTTCGAACCCTATAAGCTCAATGTGTATGGACAGGGCTCGTTCTTTAAGACCCACAAGGACACC
CCTCGTGATGAAAATATGTTTGCTTCTCTTGTTATTGTTTTGCCTTTCAAGCATGAGGGCGGAGAACTCCTGCTC
AGGCACCGGGGTCGTGAACTCGTCTTTAATGGCCAGGCTCTAATTGACGATGCACCTGCAGCTTCTGTGGCGTAT
GTTGCATTTTTCAGCGACGTTGAGCATGAAGTCGCCCGAGTATCATCTGGGTATAGGGTTACGGTGACCTACAAT
CTATACTTCGACCCGTCGAGGCGTGCTCCCTCCGCTCGTATTTCAAATGATTCGAAATTGGAACACCCATTTAAA
ACCGAATTAAGAAGGGTCATGGAAGATGCTGTCATCAGAGATGCTCACCCCGTCCTTGGTTTTGGCCTTGAACAC
GCTTATCCATTCGAGGCAGCAATCCACCGAATGGATGCCCTGAAACTGAAAGGCACTGACGCAGTCCTCATCAAA
GTGTTCAAAGAACTCGGGATTCACTATGATTTCTTCCTGTTATATCGCGAGGATGAGGAGGACCTGTATTGTCCC
TTTCGTATTCTGACTCGCAACATTATTGATGGTGATGAAAGCTATAATCAAGATGTTGTGGAAAGGATCGTGGAT
AGAGGCGCATGGTTGGTATGGCAAGAGAGTCCAAGCGAGATAATTCCGGACGTGCCAATAGTATTTGGTGAATTT
CGCTCCATCGTTACCGCAAGGCCATCCGTTCCAAGCCTGGAGGTAGAATGGGTTACTGAACCGAACGAAGAACAT
GTGGACGGTTCCCCTATGCTGATTTATGGAAATGAGGTATCAATAGGATCTCAGTATCACCAGCTTTGTGTCATT
GCTCGGTTCTTCCCTCTCTCCTTAGAAATTAATCTGATTGAGACTTTATCATCTTTATCATCTTGTATAAATATG
GGGAATGGATATTTTATGGGTCCTCGTCGAGTCAAGCTCGTTAGATGA
Gene >Agabi119p4|015750
ATGAGCACTTTAACAGACGATATCACGATTCAAACACTCCGAGATTCTCTCGTCGACAAGCATAATTTGCATGAG
CCCTGGACTTCGGGTGTTATATCTCTATCAGAGCCTGAAAAAACTCTCTTTTACGAAACAGAAGACGGAGTTCCA
AGGTGACAAACAGTCTTTTACCACAAGCGTCTAATTGTTGGTGAACACACAATCTGATGAAGGTCTCTCAAATTG
GGTTTGAACAATCAAGATGAGGTCAGAAATCTTAGTGACGTCTGCCAACCGGCAACTTTCGGACTCAACAAGGAG
GATGTCCTTGATGAGACTTATCGCAAGGCCGGAAAATTGGACGGTGACAGATTTGCCTGGCGTTTCAATCCCTCT
GATAAGAGTAACTTTGCCAATCAGCTAGCAGCAGCTCTTTTCCCATGGGAAACCCTCAACAGCGGTATTCGTTTC
GAACCCTATAAGCTCAATGTGTATGGTGAAAATTTTATCTTTGTAAATATTTTGTCAGCTTGCTGACACTCTCCA
AGGACAGGGCTCGTTCTTTAAGACCCACAAGGACACCCCTCGTGATGAAAATATGTTTGCTTCTCTTGTTATTGT
TTTGCCTTTCAAGCATGAGGGCGGAGAACTCCTGCTCAGGCACCGGGGTCGTGAACTCGTCTTTAATGGCCAGGC
TCTAATTGACGATGCACCTGCAGCTTCTGTGGCGTATGTTGCATTTTTCAGCGACGTTGAGCATGAAGTCGCCCG
AGTATCATCTGGGTATAGGGTTACGGTGACCTACAATCTATACTTCGACCCGTCGAGGCGTGCTCCCTCCGCTCG
TATTTCAAATGATTCGAAATTGGAACACCCATTTAAAACCGAATTAAGAAGGGTCATGGAAGATGCTGTCATCAG
AGATGCTCACCCCGTCCTTGGTTTTGGCCTTGAACACGCTTATCCATTCGAGGCAGCAATCCACCGAATGGATGC
CCTGAAACTGAAAGGCACTGACGCAGTCCTCATCAAAGTGTTCAAAGAACTCGGGATTCACTATGATTTCTTCCT
GTTATATCGCGAGGATGAGGAGGACCTGTATTGTCCCTTTCGTATTCTGACTCGCAACATTATTGATGGTGATGA
AAGCTATAATCAAGATGTTGTGGAAAGGATCGTGGATAGAGGCGCATGGTTGGTATGGCAAGAGAGTCCAAGCGA
GATAATTCCGGACGTGCCAATAGTATTTGGTGAATTTCGCTCCATCGTTACCGCAAGGCCATCCGTTCCAAGCCT
GGAGGTAGAATGGGTTACTGAACCGAACGAAGAACATGTGGACGGTTCCCCTATGCTGATTTATGGAAATGAGGT
ATCAATAGGATCTCAGTATCACCAGCTTTGTGTCATTGCTCGGTTCTTCCCTCTCTCCTTAGAAATTAATCTGAT
TGAGACTTTATCATCTTTATCATCTTGTATAAATATGGGGAATGGATATTTTATGGGTCCTCGTCGAGTCAAGCT
CGTTAGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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