Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|015390
Gene name
Locationscaffold_10:150356..151281
Strand-
Gene length (bp)925
Transcript length (bp)708
Coding sequence length (bp)708
Protein length (aa) 236

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05724 TPMT Thiopurine S-methyltransferase (TPMT) 5.2E-32 32 207
PF13649 Methyltransf_25 Methyltransferase domain 3.4E-11 79 172
PF13847 Methyltransf_31 Methyltransferase domain 1.5E-09 78 176
PF08241 Methyltransf_11 Methyltransferase domain 2.1E-07 77 175
PF08242 Methyltransf_12 Methyltransferase domain 5.6E-07 79 174

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q6AWU6|HOL3_ARATH Probable thiol methyltransferase 2 OS=Arabidopsis thaliana GN=HOL3 PE=1 SV=1 24 232 8.0E-41
sp|Q93V78|TMT1_BRAOL Thiocyanate methyltransferase 1 OS=Brassica oleracea GN=TMT1 PE=1 SV=1 19 232 1.0E-35
sp|Q93XC4|TMT2_BRAOL Probable thiocyanate methyltransferase 2 OS=Brassica oleracea GN=TMT2 PE=2 SV=1 20 232 2.0E-35
sp|O80562|HOL2_ARATH Probable thiol methyltransferase 1 OS=Arabidopsis thaliana GN=HOL2 PE=1 SV=1 35 232 2.0E-33
sp|Q0WP12|HOL1_ARATH Thiocyanate methyltransferase 1 OS=Arabidopsis thaliana GN=HOL1 PE=1 SV=1 19 234 2.0E-31
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Swissprot ID Swissprot Description Start End E-value
sp|Q6AWU6|HOL3_ARATH Probable thiol methyltransferase 2 OS=Arabidopsis thaliana GN=HOL3 PE=1 SV=1 24 232 8.0E-41
sp|Q93V78|TMT1_BRAOL Thiocyanate methyltransferase 1 OS=Brassica oleracea GN=TMT1 PE=1 SV=1 19 232 1.0E-35
sp|Q93XC4|TMT2_BRAOL Probable thiocyanate methyltransferase 2 OS=Brassica oleracea GN=TMT2 PE=2 SV=1 20 232 2.0E-35
sp|O80562|HOL2_ARATH Probable thiol methyltransferase 1 OS=Arabidopsis thaliana GN=HOL2 PE=1 SV=1 35 232 2.0E-33
sp|Q0WP12|HOL1_ARATH Thiocyanate methyltransferase 1 OS=Arabidopsis thaliana GN=HOL1 PE=1 SV=1 19 234 2.0E-31
sp|A1S2Z7|TPMT_SHEAM Thiopurine S-methyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tpm PE=3 SV=1 31 209 6.0E-12
sp|C3K732|TPMT_PSEFS Thiopurine S-methyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=tpm PE=3 SV=1 31 193 1.0E-11
sp|A5F1V4|TPMT_VIBC3 Thiopurine S-methyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) GN=tpm PE=3 SV=1 31 193 5.0E-11
sp|C3LLS2|TPMT_VIBCM Thiopurine S-methyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=tpm PE=3 SV=1 31 193 9.0E-11
sp|Q9KSN0|TPMT_VIBCH Thiopurine S-methyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=tpm PE=3 SV=1 31 193 9.0E-11
sp|Q5WSX9|TPMT_LEGPL Thiopurine S-methyltransferase OS=Legionella pneumophila (strain Lens) GN=tpm PE=3 SV=1 35 215 4.0E-10
sp|Q5X154|TPMT_LEGPA Thiopurine S-methyltransferase OS=Legionella pneumophila (strain Paris) GN=tpm PE=3 SV=1 35 196 4.0E-10
sp|B5FEQ9|TPMT_VIBFM Thiopurine S-methyltransferase OS=Vibrio fischeri (strain MJ11) GN=tpm PE=3 SV=1 31 193 8.0E-10
sp|Q5E4N9|TPMT_VIBF1 Thiopurine S-methyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tpm PE=3 SV=1 31 204 9.0E-10
sp|B1KHT1|TPMT_SHEWM Thiopurine S-methyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tpm PE=3 SV=1 31 207 1.0E-09
sp|Q0HR25|TPMT_SHESR Thiopurine S-methyltransferase OS=Shewanella sp. (strain MR-7) GN=tpm PE=3 SV=1 31 207 1.0E-09
sp|B7VPF3|TPMT_VIBTL Thiopurine S-methyltransferase OS=Vibrio tasmaniensis (strain LGP32) GN=tpm PE=3 SV=1 32 205 1.0E-09
sp|Q0HMQ6|TPMT_SHESM Thiopurine S-methyltransferase OS=Shewanella sp. (strain MR-4) GN=tpm PE=3 SV=1 31 207 1.0E-09
sp|Q5ZRP5|TPMT_LEGPH Thiopurine S-methyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=tpm PE=3 SV=1 35 196 1.0E-09
sp|Q17QQ2|TPMT_BOVIN Thiopurine S-methyltransferase OS=Bos taurus GN=TPMT PE=2 SV=1 35 193 2.0E-09
sp|P9WKL4|Y560_MYCTO Uncharacterized protein MT0586 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0586 PE=3 SV=1 45 179 3.0E-09
sp|P9WKL5|Y560_MYCTU Uncharacterized protein Rv0560c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0560c PE=1 SV=1 45 179 3.0E-09
sp|A1KG37|Y605_MYCBP Uncharacterized protein BCG_0605c OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_0605c PE=1 SV=1 45 179 3.0E-09
sp|A5TZU0|Y567_MYCTA Uncharacterized protein MRA_0567 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_0567 PE=1 SV=1 45 179 3.0E-09
sp|Q6LRI5|TPMT_PHOPR Thiopurine S-methyltransferase OS=Photobacterium profundum GN=tpm PE=3 SV=1 35 193 6.0E-09
sp|Q87Q54|TPMT_VIBPA Thiopurine S-methyltransferase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=tpm PE=3 SV=1 69 205 6.0E-09
sp|B6ENK8|TPMT_ALISL Thiopurine S-methyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=tpm PE=3 SV=1 35 193 6.0E-09
sp|A5II06|TPMT_LEGPC Thiopurine S-methyltransferase OS=Legionella pneumophila (strain Corby) GN=tpm PE=3 SV=1 35 196 8.0E-09
sp|A7MVH9|TPMT_VIBCB Thiopurine S-methyltransferase OS=Vibrio campbellii (strain ATCC BAA-1116 / BB120) GN=tpm PE=3 SV=1 35 205 1.0E-08
sp|Q12RU3|TPMT_SHEDO Thiopurine S-methyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=tpm PE=3 SV=1 31 207 2.0E-08
sp|A3QI29|TPMT_SHELP Thiopurine S-methyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tpm PE=3 SV=1 31 207 6.0E-08
sp|Q3K932|TPMT_PSEPF Thiopurine S-methyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=tpm PE=3 SV=1 31 193 7.0E-08
sp|Q504A5|TPMT_DANRE Probable thiopurine S-methyltransferase OS=Danio rerio GN=tpmt PE=2 SV=1 29 196 8.0E-08
sp|A0KSQ0|TPMT_SHESA Thiopurine S-methyltransferase OS=Shewanella sp. (strain ANA-3) GN=tpm PE=3 SV=1 31 207 1.0E-07
sp|Q60AQ2|TPMT_METCA Thiopurine S-methyltransferase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN=tpm PE=3 SV=1 31 193 3.0E-07
sp|Q7MK46|TPMT_VIBVY Thiopurine S-methyltransferase OS=Vibrio vulnificus (strain YJ016) GN=tpm PE=3 SV=1 35 215 5.0E-07
sp|Q8DA33|TPMT_VIBVU Thiopurine S-methyltransferase OS=Vibrio vulnificus (strain CMCP6) GN=tpm PE=3 SV=1 35 215 5.0E-07
sp|Q3BCR4|TPMT_CHLAE Thiopurine S-methyltransferase OS=Chlorocebus aethiops GN=TPMT PE=2 SV=1 35 193 8.0E-07
sp|Q9Z0T0|TPMT_RAT Thiopurine S-methyltransferase OS=Rattus norvegicus GN=Tpmt PE=2 SV=1 35 193 9.0E-07
sp|A8G0J1|TPMT_SHESH Thiopurine S-methyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=tpm PE=3 SV=1 31 207 1.0E-06
sp|A3D007|TPMT_SHEB5 Thiopurine S-methyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tpm PE=3 SV=1 31 207 2.0E-06
sp|Q8EJ86|TPMT_SHEON Thiopurine S-methyltransferase OS=Shewanella oneidensis (strain MR-1) GN=tpm PE=3 SV=1 73 207 2.0E-06
sp|Q07XD8|TPMT_SHEFN Thiopurine S-methyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=tpm PE=3 SV=1 31 207 2.0E-06
sp|Q3BCQ8|TPMT_RABIT Thiopurine S-methyltransferase OS=Oryctolagus cuniculus GN=TPMT PE=2 SV=1 39 193 3.0E-06
sp|Q4K8U2|TPMT_PSEF5 Thiopurine S-methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tpm PE=3 SV=1 35 222 5.0E-06
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GO

GO Term Description Terminal node
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity Yes
GO:0008168 methyltransferase activity Yes
GO:0003824 catalytic activity No
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|015390
MSGTGPISQPFNFRTDSEPAKAVRKLVDVYEPSTWNKAWQASVTPWDAGEFQPPLKEVIETNIDGIQWPHRTGKA
LVPGCGTGYDAVYLASTLGVHAIGLDSSEIAVDKANASVKDRPLAKGKATFELADFFKYSSNEGFDLIYDYTFFV
AIPPSRRNEWGEKMAELIKPGGYLITLIFPIDPKSDVGPPFYVRPEHYDEPLASYFEKVYERIPETSQESHKGRE
RVAVWRRKVE*
Coding >Agabi119p4|015390
ATGAGTGGAACTGGTCCTATAAGTCAACCCTTCAACTTCAGAACCGACTCTGAGCCAGCAAAGGCGGTGCGAAAG
CTCGTCGACGTATACGAACCGAGTACCTGGAACAAGGCATGGCAAGCGAGCGTAACACCTTGGGATGCGGGAGAA
TTTCAACCGCCACTTAAAGAAGTCATCGAAACTAATATTGACGGGATACAATGGCCGCATCGAACAGGCAAAGCC
CTTGTTCCAGGATGTGGTACCGGGTATGATGCTGTTTATCTCGCATCTACCCTTGGAGTCCATGCCATAGGCCTT
GATTCGTCAGAGATTGCCGTTGATAAGGCTAACGCTTCCGTGAAAGATAGGCCCCTTGCCAAGGGAAAAGCAACA
TTCGAGCTAGCCGATTTCTTCAAATACTCATCCAATGAAGGTTTTGATCTTATATACGATTATACGTTTTTCGTT
GCTATACCGCCTTCCCGTCGAAATGAGTGGGGAGAAAAGATGGCGGAACTAATCAAACCTGGAGGATACCTCATA
ACGCTGATCTTCCCAATTGATCCCAAGTCTGATGTGGGACCACCCTTCTATGTCCGTCCAGAGCATTATGACGAG
CCGCTTGCTTCCTACTTCGAGAAAGTCTATGAAAGAATTCCGGAAACCTCTCAGGAAAGTCACAAAGGACGTGAG
AGAGTGGCAGTTTGGAGAAGGAAAGTCGAGTAA
Transcript >Agabi119p4|015390
ATGAGTGGAACTGGTCCTATAAGTCAACCCTTCAACTTCAGAACCGACTCTGAGCCAGCAAAGGCGGTGCGAAAG
CTCGTCGACGTATACGAACCGAGTACCTGGAACAAGGCATGGCAAGCGAGCGTAACACCTTGGGATGCGGGAGAA
TTTCAACCGCCACTTAAAGAAGTCATCGAAACTAATATTGACGGGATACAATGGCCGCATCGAACAGGCAAAGCC
CTTGTTCCAGGATGTGGTACCGGGTATGATGCTGTTTATCTCGCATCTACCCTTGGAGTCCATGCCATAGGCCTT
GATTCGTCAGAGATTGCCGTTGATAAGGCTAACGCTTCCGTGAAAGATAGGCCCCTTGCCAAGGGAAAAGCAACA
TTCGAGCTAGCCGATTTCTTCAAATACTCATCCAATGAAGGTTTTGATCTTATATACGATTATACGTTTTTCGTT
GCTATACCGCCTTCCCGTCGAAATGAGTGGGGAGAAAAGATGGCGGAACTAATCAAACCTGGAGGATACCTCATA
ACGCTGATCTTCCCAATTGATCCCAAGTCTGATGTGGGACCACCCTTCTATGTCCGTCCAGAGCATTATGACGAG
CCGCTTGCTTCCTACTTCGAGAAAGTCTATGAAAGAATTCCGGAAACCTCTCAGGAAAGTCACAAAGGACGTGAG
AGAGTGGCAGTTTGGAGAAGGAAAGTCGAGTAA
Gene >Agabi119p4|015390
ATGAGTGGAACTGGTCCTATAAGTCAACCCTTCAACTTCAGAACCGACTCTGAGCCAGCAAAGGCGGTGCGAAAG
CTCGTCGACGTATACGAACCGAGTACCTGGAACAAGGCATGGCAAGTACTCCAACGTTCGATTACCATATCAGAT
TAAACAATTCCAAAAGGGAGGCGAGCGTAACACCTTGGGATGCGGGAGAATTTCAACCGCCACTTAAAGAAGTCA
TCGAAACTAATATTGACGGGATACAATGGCCGCATCGAACAGGCAAAGCCCTTGTTCCAGGATGTGGTACCGTAA
GTCGCGTTAAACAACAGTCAGCTCTGCCTTGAATAACTTCTGCACAAGGGGTATGATGCTGTTTATCTCGCATCT
ACCCTTGGAGTCCATGCCATAGGCCTTGATTCGTCAGAGATTGCCGTTGATAAGGCTAACGCGTGCGTCTCGTTT
CTGAACTTCTTACCGCAAAAATCAATGATTCTGTTGTGGATCATCACAGTTCCGTGAAAGATAGGCCCCTTGCCA
AGGGAAAAGCAACATTCGAGCTAGCCGATTTCTTCAAATACTCATCCAATGAAGGTTTTGATCTTATATACGATT
ATACGTGAGGAGTCTATTTCCATCATAAACTTGAAGTCAAAACAAATGTTTTGCTAGGTTTTTCGTTGCTATACC
GCCTTCCCGTCGAAATGAGTGGGGAGAAAAGATGGCGGAACTAATCAAACCTGGAGGATACCTCATAACGCTGAT
CTTCCCAATTGATCCCAAGTCTGATGTGGGACCACCCTTCTATGTCCGTCCAGAGCATTATGACGAGCCGCTTGC
TTCCTACTTCGAGAAAGTCTATGAAAGAATTCCGGAAACCTCTCAGGAAAGTCACAAAGGACGTGAGAGAGTGGC
AGTTTGGAGAAGGAAAGTCGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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