Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|014740
Gene name
Locationscaffold_01b:135472..136554
Strand+
Gene length (bp)1082
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01026 TatD_DNase TatD related DNase 2.5E-43 26 312

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q93075|TATD2_HUMAN Putative deoxyribonuclease TATDN2 OS=Homo sapiens GN=TATDN2 PE=2 SV=2 25 314 7.0E-41
sp|P37545|YABD_BACSU Uncharacterized metal-dependent hydrolase YabD OS=Bacillus subtilis (strain 168) GN=yabD PE=3 SV=1 25 314 1.0E-28
sp|D4GGR2|TATD_PANAM 3'-5' ssDNA/RNA exonuclease TatD OS=Pantoea ananatis (strain LMG 20103) GN=tatD PE=3 SV=2 99 314 4.0E-23
sp|P57436|Y355_BUCAI Uncharacterized metal-dependent hydrolase BU355 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=BU355 PE=3 SV=1 25 258 5.0E-22
sp|P73335|DTD3_SYNY3 D-aminoacyl-tRNA deacylase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dtd3 PE=1 SV=1 99 290 6.0E-22
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Swissprot ID Swissprot Description Start End E-value
sp|Q93075|TATD2_HUMAN Putative deoxyribonuclease TATDN2 OS=Homo sapiens GN=TATDN2 PE=2 SV=2 25 314 7.0E-41
sp|P37545|YABD_BACSU Uncharacterized metal-dependent hydrolase YabD OS=Bacillus subtilis (strain 168) GN=yabD PE=3 SV=1 25 314 1.0E-28
sp|D4GGR2|TATD_PANAM 3'-5' ssDNA/RNA exonuclease TatD OS=Pantoea ananatis (strain LMG 20103) GN=tatD PE=3 SV=2 99 314 4.0E-23
sp|P57436|Y355_BUCAI Uncharacterized metal-dependent hydrolase BU355 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=BU355 PE=3 SV=1 25 258 5.0E-22
sp|P73335|DTD3_SYNY3 D-aminoacyl-tRNA deacylase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dtd3 PE=1 SV=1 99 290 6.0E-22
sp|P44718|Y454_HAEIN Uncharacterized metal-dependent hydrolase HI_0454 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0454 PE=3 SV=1 105 257 1.0E-21
sp|B2VG45|TATD_ERWT9 3'-5' ssDNA/RNA exonuclease TatD OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=tatD PE=3 SV=1 99 314 3.0E-21
sp|Q8K9J1|Y343_BUCAP Uncharacterized metal-dependent hydrolase BUsg_343 OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=BUsg_343 PE=3 SV=1 101 257 7.0E-21
sp|E8XYF5|TATD_RAHSY 3'-5' ssDNA/RNA exonuclease TatD OS=Rahnella sp. (strain Y9602) GN=tatD PE=3 SV=1 101 262 8.0E-21
sp|A8ACY8|TATD_CITK8 3'-5' ssDNA/RNA exonuclease TatD OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=tatD PE=3 SV=2 101 280 4.0E-20
sp|C6C4V4|TATD_DICDC 3'-5' ssDNA/RNA exonuclease TatD OS=Dickeya dadantii (strain Ech703) GN=tatD PE=3 SV=1 101 261 7.0E-20
sp|E1SKR8|TATD_PANVC 3'-5' ssDNA/RNA exonuclease TatD OS=Pantoea vagans (strain C9-1) GN=tatD PE=3 SV=1 101 260 8.0E-20
sp|Q9PRC8|Y017_UREPA Uncharacterized metal-dependent hydrolase UU017 OS=Ureaplasma parvum serovar 3 (strain ATCC 700970) GN=UU017 PE=3 SV=1 104 311 1.0E-19
sp|E6WHK1|TATD_PANSA 3'-5' ssDNA/RNA exonuclease TatD OS=Pantoea sp. (strain At-9b) GN=tatD PE=3 SV=1 90 261 1.0E-19
sp|A8G8C4|TATD_SERP5 3'-5' ssDNA/RNA exonuclease TatD OS=Serratia proteamaculans (strain 568) GN=tatD PE=3 SV=1 101 312 1.0E-19
sp|Q9L6M2|TATD_SALTY 3'-5' ssDNA/RNA exonuclease TatD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=tatD PE=3 SV=1 101 260 2.0E-19
sp|E3G381|TATD_ENTLS 3'-5' ssDNA/RNA exonuclease TatD OS=Enterobacter lignolyticus (strain SCF1) GN=tatD PE=3 SV=1 101 260 5.0E-19
sp|D0Z9R0|TATD_EDWTE 3'-5' ssDNA/RNA exonuclease TatD OS=Edwardsiella tarda (strain EIB202) GN=tatD PE=3 SV=1 101 271 6.0E-19
sp|P27859|TATD_ECOLI 3'-5' ssDNA/RNA exonuclease TatD OS=Escherichia coli (strain K12) GN=tatD PE=1 SV=3 101 260 7.0E-19
sp|Q0SZ31|TATD_SHIF8 3'-5' ssDNA/RNA exonuclease TatD OS=Shigella flexneri serotype 5b (strain 8401) GN=tatD PE=3 SV=1 101 260 7.0E-19
sp|D2TUZ4|TATD_CITRI 3'-5' ssDNA/RNA exonuclease TatD OS=Citrobacter rodentium (strain ICC168) GN=tatD PE=3 SV=1 101 314 8.0E-19
sp|B7LTZ5|TATD_ESCF3 3'-5' ssDNA/RNA exonuclease TatD OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tatD PE=3 SV=1 101 260 1.0E-18
sp|D4ICL5|TATD_ERWAE 3'-5' ssDNA/RNA exonuclease TatD OS=Erwinia amylovora (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3) GN=tatD PE=3 SV=1 101 314 6.0E-18
sp|D8MKW4|TATD_ERWBE 3'-5' ssDNA/RNA exonuclease TatD OS=Erwinia billingiae (strain Eb661) GN=tatD PE=3 SV=1 101 312 7.0E-18
sp|B5XYH5|TATD_KLEP3 3'-5' ssDNA/RNA exonuclease TatD OS=Klebsiella pneumoniae (strain 342) GN=tatD PE=3 SV=1 101 260 7.0E-18
sp|Q89AG7|Y325_BUCBP Uncharacterized metal-dependent hydrolase bbp_325 OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=bbp_325 PE=3 SV=1 96 258 8.0E-18
sp|A4WFX9|TATD_ENT38 3'-5' ssDNA/RNA exonuclease TatD OS=Enterobacter sp. (strain 638) GN=tatD PE=3 SV=2 91 314 4.0E-17
sp|C9XTA5|TATD_SICTZ 3'-5' ssDNA/RNA exonuclease TatD OS=Siccibacter turicensis (strain DSM 18703 / LMG 23827 / z3032) GN=tatD PE=3 SV=2 81 260 5.0E-17
sp|A7MQN1|TATD_CROS8 3'-5' ssDNA/RNA exonuclease TatD OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=tatD PE=3 SV=2 101 271 6.0E-17
sp|P0AFQ7|YCFH_ECOLI Uncharacterized metal-dependent hydrolase YcfH OS=Escherichia coli (strain K12) GN=ycfH PE=1 SV=1 102 290 8.0E-17
sp|P0AFQ8|YCFH_ECOL6 Uncharacterized metal-dependent hydrolase YcfH OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ycfH PE=3 SV=1 102 290 8.0E-17
sp|P0AFQ9|YCFH_ECO57 Uncharacterized metal-dependent hydrolase YcfH OS=Escherichia coli O157:H7 GN=ycfH PE=3 SV=1 102 290 8.0E-17
sp|B1JP69|TATD_YERPY 3'-5' ssDNA/RNA exonuclease TatD OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=tatD PE=3 SV=1 82 312 8.0E-16
sp|Q9UUF1|YNF8_SCHPO Deoxyribonuclease Tat-D OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi038 PE=3 SV=1 104 253 2.0E-14
sp|Q6DAQ1|TATD_PECAS 3'-5' ssDNA/RNA exonuclease TatD OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=tatD PE=3 SV=1 99 260 2.0E-14
sp|E0SLH6|TATD_DICD3 3'-5' ssDNA/RNA exonuclease TatD OS=Dickeya dadantii (strain 3937) GN=tatD PE=3 SV=1 105 312 2.0E-14
sp|D0KC77|TATD_PECWW 3'-5' ssDNA/RNA exonuclease TatD OS=Pectobacterium wasabiae (strain WPP163) GN=tatD PE=3 SV=1 99 260 2.0E-14
sp|O08343|TATD_MYCTU Uncharacterized metal-dependent hydrolase TatD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=tatD PE=1 SV=1 101 314 7.0E-14
sp|C6DI71|TATD_PECCP 3'-5' ssDNA/RNA exonuclease TatD OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=tatD PE=3 SV=1 99 260 2.0E-13
sp|P39408|YJJV_ECOLI Uncharacterized metal-dependent hydrolase YjjV OS=Escherichia coli (strain K12) GN=yjjV PE=1 SV=2 101 265 2.0E-10
sp|P47255|Y009_MYCGE Uncharacterized metal-dependent hydrolase MG009 OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=MG009 PE=3 SV=1 104 258 3.0E-09
sp|P78005|Y009_MYCPN Uncharacterized metal-dependent hydrolase MPN_009 OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=MPN_009 PE=3 SV=1 104 258 5.0E-09
sp|C4VAS3|TATD1_NOSCE Putative deoxyribonuclease TATDN1 homolog OS=Nosema ceranae (strain BRL01) GN=NCER_101798 PE=3 SV=1 99 254 8.0E-09
sp|P44500|Y081_HAEIN Uncharacterized metal-dependent hydrolase HI_0081 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0081 PE=3 SV=1 99 255 7.0E-07
sp|B7XJI2|TATD1_ENTBH Putative deoxyribonuclease TATDN1 homolog OS=Enterocytozoon bieneusi (strain H348) GN=EBI_25826 PE=3 SV=1 132 256 3.0E-06
sp|Q58778|Y1383_METJA Uncharacterized protein MJ1383 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1383 PE=3 SV=1 77 252 3.0E-06
sp|Q6P8M1|TATD1_MOUSE Putative deoxyribonuclease TATDN1 OS=Mus musculus GN=Tatdn1 PE=1 SV=1 100 253 3.0E-06
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GO

GO Term Description Terminal node
GO:0016788 hydrolase activity, acting on ester bonds Yes
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup1925
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|014740
Agaricus bisporus var bisporus H97 AgabiH97|014740
Agaricus bisporus var burnettii H119p4 Agabi119p4|014740 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|014740
MAKKKSTTPPETLLLLPKWPSSAPIVDTHTHLASTFEAYRTRYKDHATVFDMVRAFYHNTTVEALVDVWCEAPVR
TVWREFADSALTPEDRTLKWGGIDYWFVMGVHPHEAQHYTDDIENDIIAAMSHPRCVGWGEMGLDYHYDNSPRDI
QRSVFRRQLVHAVKLNKPLTIHTREADDDTEMILKDLVPKDHKIHIHCFTDSPEFAQRLLDYFPNLYIGITGVIT
YATNTDTSTVIKNMIPSSLRILLETDAPFMVPANLYNAIPELKGKRLPISHSAMIPWTADFVAGLTEGKWDAERV
MIEARENAKRVYGI*
Coding >Agabi119p4|014740
ATGGCCAAGAAGAAATCGACAACACCGCCAGAGACCCTCCTCCTCCTCCCAAAATGGCCCTCCTCAGCTCCGATC
GTCGACACCCACACTCACCTCGCGTCTACCTTTGAGGCCTATCGCACTCGCTACAAAGACCATGCCACCGTCTTT
GATATGGTTCGCGCGTTTTACCACAACACAACTGTAGAGGCTCTGGTGGATGTCTGGTGTGAAGCTCCTGTCCGA
ACCGTCTGGCGCGAATTTGCAGATTCAGCACTCACACCCGAAGATCGCACTCTCAAATGGGGAGGCATCGATTAT
TGGTTTGTCATGGGCGTTCATCCACATGAAGCTCAACATTACACCGACGACATCGAAAATGACATTATAGCGGCC
ATGTCCCATCCCCGTTGTGTCGGATGGGGTGAAATGGGTTTAGATTACCATTATGACAATTCTCCTCGTGATATC
CAACGTTCTGTCTTTCGCAGACAACTCGTCCACGCCGTCAAACTCAATAAACCACTCACCATCCACACACGCGAA
GCCGACGATGACACGGAAATGATCCTCAAAGACCTCGTTCCCAAAGATCATAAAATTCATATACATTGTTTCACC
GATTCACCCGAGTTTGCACAACGCCTTTTGGATTATTTCCCCAATCTCTATATTGGAATCACAGGTGTCATCACG
TATGCTACCAACACCGATACCTCGACCGTCATCAAAAACATGATCCCATCGTCACTCAGGATTCTACTCGAAACA
GACGCCCCTTTTATGGTCCCTGCAAACCTCTACAACGCCATCCCTGAACTCAAAGGAAAAAGACTTCCTATATCC
CATTCAGCAATGATACCCTGGACAGCCGACTTTGTCGCCGGTCTGACGGAAGGTAAATGGGACGCAGAGAGGGTG
ATGATCGAGGCGAGAGAAAATGCAAAACGAGTTTATGGCATTTGA
Transcript >Agabi119p4|014740
ATGGCCAAGAAGAAATCGACAACACCGCCAGAGACCCTCCTCCTCCTCCCAAAATGGCCCTCCTCAGCTCCGATC
GTCGACACCCACACTCACCTCGCGTCTACCTTTGAGGCCTATCGCACTCGCTACAAAGACCATGCCACCGTCTTT
GATATGGTTCGCGCGTTTTACCACAACACAACTGTAGAGGCTCTGGTGGATGTCTGGTGTGAAGCTCCTGTCCGA
ACCGTCTGGCGCGAATTTGCAGATTCAGCACTCACACCCGAAGATCGCACTCTCAAATGGGGAGGCATCGATTAT
TGGTTTGTCATGGGCGTTCATCCACATGAAGCTCAACATTACACCGACGACATCGAAAATGACATTATAGCGGCC
ATGTCCCATCCCCGTTGTGTCGGATGGGGTGAAATGGGTTTAGATTACCATTATGACAATTCTCCTCGTGATATC
CAACGTTCTGTCTTTCGCAGACAACTCGTCCACGCCGTCAAACTCAATAAACCACTCACCATCCACACACGCGAA
GCCGACGATGACACGGAAATGATCCTCAAAGACCTCGTTCCCAAAGATCATAAAATTCATATACATTGTTTCACC
GATTCACCCGAGTTTGCACAACGCCTTTTGGATTATTTCCCCAATCTCTATATTGGAATCACAGGTGTCATCACG
TATGCTACCAACACCGATACCTCGACCGTCATCAAAAACATGATCCCATCGTCACTCAGGATTCTACTCGAAACA
GACGCCCCTTTTATGGTCCCTGCAAACCTCTACAACGCCATCCCTGAACTCAAAGGAAAAAGACTTCCTATATCC
CATTCAGCAATGATACCCTGGACAGCCGACTTTGTCGCCGGTCTGACGGAAGGTAAATGGGACGCAGAGAGGGTG
ATGATCGAGGCGAGAGAAAATGCAAAACGAGTTTATGGCATTTGA
Gene >Agabi119p4|014740
ATGGCCAAGAAGAAATCGACAACACCGCCAGAGACCCTCCTCCTCCTCCCAAAATGGCCCTCCTCAGCTCCGATC
GTCGACACCCACACTCACCTCGCGTCTACCTTTGAGGCCTATCGCACTCGCTACAAAGACCATGCCACCGTCTTT
GATATGGTTCGCGCGTTTTACCACAACACAACTGTAGAGGCTCTGGTGGATGTCTGGTGTGAAGCTCCTGTCCGA
ACCGTCTGGCGCGAATTTGCAGATTCAGCACTCACACCCGAAGATCGCACTCTCAAATGGGGAGGCATCGATTAT
TGGTTTGTCATGGGCGTTCATCCGTCAGTCCCTTGATCAACATTCCCACCTCCTCTCAACACCCCTCATAGACAT
GAAGCTCAACATTACACCGACGACATCGAAAATGACATGTACGTCACGTTTTGGATTCTCTTTCATGACTTATCG
TTACCAGTATAGCGGCCATGTCCCATCCCCGTTGTGTCGGATGGGGTGAAATGGGTTTAGATTACCATTATGACA
ATTCTCCTCGTGATATCCAACGTTCTGTCTTTCGCAGACAACTCGTCCACGCCGTCAAACTCAATAAACCACTCA
CCATCCACACACGCGAAGCCGACGATGACACGGAAATGATCCTCAAAGACCTCGTTCCCAAAGATCATAAAGTGC
GTTACATCGCCAAAATATACTCGTTACTTACGATAAAGCAGATTCATATACATTGTTTCACCGATTCACCCGAGT
TTGCACAACGCCTTTTGGATTATTTCCCCAATCTCTATATTGGAATCACAGGTGTCATCACGTATGCTACCAACA
CCGATACCTCGACCGTCATCAAAAACATGATCCCATCGTCACTCAGGATTCTACTCGAAACAGACGCCCCTTTTA
TGGTCCCTGCAAACCTCTACAACGCCATCCCTGAACTCAAAGGAAAAAGACTTCCTATATCCCATTCAGCAATGA
TACCCTGGACAGCCGACTTTGTCGCCGGTCTGACGGAAGGTAAATGGGACGCAGAGAGGGTGATGATCGAGGCGA
GAGAAAATGCAAAACGAGTTTATGGCATTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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