Fungal Genomics

General Properties

Protein ID	Agabi119p4|012330
Gene name
Location	scaffold_01a:2961885..2962648
Strand	+
Gene length (bp)	763
Transcript length (bp)	669
Coding sequence length (bp)	669
Protein length (aa)	223

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	9.0E-09	63	105
PF00646	F-box	F-box domain	2.5E-06	64	93

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	1877
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|012330
Agaricus bisporus var bisporus H97	AgabiH97|012330
Agaricus bisporus var burnettii H119p4	Agabi119p4|012330 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|012330 MSLLFTVLRSASQHESDDDDLINVVSPANTRPSSPTLKGAAARPIPKPLLLNKSRSRTDPLRVLPTELSQRIFSR LRLSDLAKCSLVSKKWNRSQTINYVWFQHYRRDNFHDESLPPGKWSKRESKQNWRLVHLKTLRERSPPSTPFSRY SSAYNSGYQTPREMKEEQWRLEAETTSKPGKLEMREMYKELGGRKARSKAKLGSSGPIRDRGGWADGDDGWP*
Coding	>Agabi119p4|012330 ATGAGTCTCCTCTTCACCGTCCTCCGCTCCGCCTCCCAGCACGAGAGCGACGACGACGACCTCATCAACGTCGTC TCCCCCGCCAACACCCGCCCTTCCTCTCCAACCCTCAAGGGCGCTGCCGCCCGCCCCATCCCCAAACCTCTTCTC CTCAACAAATCCCGCAGCCGCACAGATCCTCTCCGTGTGCTCCCCACAGAACTCTCCCAGCGCATCTTCTCTCGC CTGCGCTTAAGCGATCTTGCAAAATGCTCTCTTGTATCGAAAAAATGGAATCGGAGTCAGACAATCAACTATGTC TGGTTTCAGCACTATCGGAGAGACAACTTTCACGATGAAAGCCTGCCACCGGGCAAGTGGTCCAAGCGCGAATCC AAACAGAACTGGCGTCTGGTCCATCTCAAGACACTACGGGAACGTTCTCCTCCTTCCACCCCCTTCTCACGTTAC TCATCCGCTTACAACTCCGGTTATCAAACACCTCGCGAGATGAAAGAAGAACAATGGCGTCTCGAGGCCGAGACT ACTTCCAAACCTGGTAAACTCGAGATGCGTGAAATGTACAAAGAGCTGGGCGGGCGCAAAGCTCGCTCAAAAGCA AAATTGGGCAGTTCAGGCCCCATTCGGGATAGAGGAGGATGGGCCGATGGTGATGATGGATGGCCCTAG
Transcript	>Agabi119p4|012330 ATGAGTCTCCTCTTCACCGTCCTCCGCTCCGCCTCCCAGCACGAGAGCGACGACGACGACCTCATCAACGTCGTC TCCCCCGCCAACACCCGCCCTTCCTCTCCAACCCTCAAGGGCGCTGCCGCCCGCCCCATCCCCAAACCTCTTCTC CTCAACAAATCCCGCAGCCGCACAGATCCTCTCCGTGTGCTCCCCACAGAACTCTCCCAGCGCATCTTCTCTCGC CTGCGCTTAAGCGATCTTGCAAAATGCTCTCTTGTATCGAAAAAATGGAATCGGAGTCAGACAATCAACTATGTC TGGTTTCAGCACTATCGGAGAGACAACTTTCACGATGAAAGCCTGCCACCGGGCAAGTGGTCCAAGCGCGAATCC AAACAGAACTGGCGTCTGGTCCATCTCAAGACACTACGGGAACGTTCTCCTCCTTCCACCCCCTTCTCACGTTAC TCATCCGCTTACAACTCCGGTTATCAAACACCTCGCGAGATGAAAGAAGAACAATGGCGTCTCGAGGCCGAGACT ACTTCCAAACCTGGTAAACTCGAGATGCGTGAAATGTACAAAGAGCTGGGCGGGCGCAAAGCTCGCTCAAAAGCA AAATTGGGCAGTTCAGGCCCCATTCGGGATAGAGGAGGATGGGCCGATGGTGATGATGGATGGCCCTAG
Gene	>Agabi119p4|012330 ATGAGTCTCCTCTTCACCGTCCTCCGCTCCGCCTCCCAGCACGAGAGCGACGACGACGACCTCATCAACGTCGTC TCCCCCGCCAACACCCGCCCTTCCTCTCCAACCCTCAAGGGCGCTGCCGCCCGCCCCATCCCCAAACCTCTTCTC CTCAACAAATCCCGCAGCCGCACAGATCCTCTCCGTGTGCTCCCCACAGAACTCTCCCAGCGCATCTTCTCTCGC CTGCGCTTAAGCGATCTTGCAAAATGCTCTCTTGTATCGAAAAAATGGAATCGGAGTCAGACAATCAACTATGGT CAGTCAACACCGTTTTTCGCATTTCTCCTTTAACCCTTCTCCAGTCTGGTTTCAGCACTATCGGAGAGACAACTT TCACGATGAAAGCCTGCCACCGGGCAAGTGGTCCAAGCGCGAATCCAAACAGAACTGGGTCTGTCTCTTTTCCCC AATGACCACATCTCTTTCTGACTGCATGCAGCGTCTGGTCCATCTCAAGACACTACGGGAACGTTCTCCTCCTTC CACCCCCTTCTCACGTTACTCATCCGCTTACAACTCCGGTTATCAAACACCTCGCGAGATGAAAGAAGAACAATG GCGTCTCGAGGCCGAGACTACTTCCAAACCTGGTAAACTCGAGATGCGTGAAATGTACAAAGAGCTGGGCGGGCG CAAAGCTCGCTCAAAAGCAAAATTGGGCAGTTCAGGCCCCATTCGGGATAGAGGAGGATGGGCCGATGGTGATGA TGGATGGCCCTAG