Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|010210
Gene name
Location	scaffold_01a:2395389..2396781
Strand	-
Gene length (bp)	1392
Transcript length (bp)	1284
Coding sequence length (bp)	1284
Protein length (aa)	428

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08316	Pal1	Pal1 cell morphology protein	9.2E-15	120	160

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P38809\|YHP7_YEAST	Uncharacterized protein YHR097C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR097C PE=1 SV=1	102	158	3.0E-08
sp\|Q9UU83\|PAL1_SCHPO	Protein pal1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pal1 PE=1 SV=1	112	165	1.0E-07
sp\|Q05518\|PAL1_YEAST	Protein PAL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAL1 PE=1 SV=1	9	158	3.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 41	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|010210 MAAVRTHTSSSDPFLDPAAPPTHRPPPPPPKQPPSANMPRPAPPSKDIHDITEAVRDTVTLRDRSDGTRARVGRS TTSIGAPNASPHHSSKRSHSEDSAIAEKSKSSGKSRGKKGSQHADVIDRLDFTSVGLFHHDGPFDACAPSRNKQR NKAPLYAWTNPPDPVQYGDSAYPSAHAYAAFSNDYPEPPKKKVDAIAEAWGIHEPEPYEEFFAGGGGSTRPDGDT PTSSIYNGRDSHSNPVTRSGLPKRVGDDAQGNKERTRGATRRSLVPPPQPIFVPDPIERLDSGAIPSPDPKRQKS IMQRIRKMRDSPNVPVTSEYDQPSSPNSAFDQPYSPTQPTRPSHKSQNSFLGRFGNKAQPQSADKPEPFVLIEPL PSSNKDLPPAPTMNVTSSGESAQHGSPEFGSPGIGRKTSLMKKVGRVVRGTR*
Coding	>Agabi119p4\|010210 ATGGCTGCAGTCCGCACCCACACATCCTCCTCAGACCCTTTCCTCGACCCCGCGGCTCCCCCCACTCATCGCCCG CCGCCACCCCCGCCCAAGCAGCCCCCGTCGGCCAACATGCCTAGGCCAGCCCCTCCCTCCAAAGACATCCACGAT ATCACCGAAGCTGTAAGAGACACCGTCACCCTTCGAGATCGCAGCGACGGCACCCGCGCCCGCGTTGGACGCAGC ACAACTTCGATTGGGGCTCCAAACGCCAGCCCCCACCATAGCTCCAAACGCTCCCATTCTGAGGACTCTGCCATC GCCGAAAAATCCAAATCTTCTGGAAAGTCTCGAGGCAAGAAAGGTTCTCAGCACGCAGACGTCATTGACCGTCTA GATTTCACAAGTGTTGGCCTCTTCCATCACGATGGTCCCTTTGATGCCTGCGCCCCTTCCCGCAACAAGCAGCGA AACAAGGCCCCTCTATACGCATGGACCAATCCCCCAGATCCAGTTCAGTATGGCGATAGTGCTTATCCATCTGCC CACGCCTATGCCGCCTTTTCTAATGACTATCCCGAACCACCAAAAAAGAAGGTCGATGCCATAGCCGAGGCCTGG GGGATACACGAACCAGAACCTTATGAAGAGTTTTTCGCTGGCGGTGGCGGCTCCACTCGCCCAGACGGTGACACC CCAACTAGTTCGATCTACAACGGGAGAGATTCACACTCCAATCCGGTTACACGCAGTGGTCTCCCTAAACGAGTT GGTGATGACGCTCAGGGCAATAAAGAGCGGACTCGCGGCGCCACCCGTCGTTCCCTTGTCCCGCCGCCTCAACCA ATATTTGTCCCAGATCCCATTGAACGCCTCGATTCAGGTGCCATCCCGTCACCGGATCCTAAGCGGCAAAAATCT ATTATGCAAAGAATACGTAAGATGCGCGACTCGCCAAACGTTCCCGTCACATCCGAATATGATCAACCGTCTTCC CCTAATTCTGCCTTTGACCAACCCTACTCTCCCACGCAGCCTACCAGACCCTCTCACAAGTCCCAGAATTCCTTC CTCGGGCGATTTGGTAATAAGGCGCAGCCCCAAAGTGCAGACAAACCTGAACCTTTCGTTTTAATCGAACCTTTG CCATCGAGTAACAAAGATTTACCACCAGCCCCTACAATGAACGTGACGTCCTCCGGGGAAAGTGCACAACATGGA TCTCCGGAATTTGGATCTCCCGGTATTGGCCGGAAAACTAGCCTCATGAAGAAAGTTGGAAGAGTTGTGCGTGGG ACCAGATGA
Transcript	>Agabi119p4\|010210 ATGGCTGCAGTCCGCACCCACACATCCTCCTCAGACCCTTTCCTCGACCCCGCGGCTCCCCCCACTCATCGCCCG CCGCCACCCCCGCCCAAGCAGCCCCCGTCGGCCAACATGCCTAGGCCAGCCCCTCCCTCCAAAGACATCCACGAT ATCACCGAAGCTGTAAGAGACACCGTCACCCTTCGAGATCGCAGCGACGGCACCCGCGCCCGCGTTGGACGCAGC ACAACTTCGATTGGGGCTCCAAACGCCAGCCCCCACCATAGCTCCAAACGCTCCCATTCTGAGGACTCTGCCATC GCCGAAAAATCCAAATCTTCTGGAAAGTCTCGAGGCAAGAAAGGTTCTCAGCACGCAGACGTCATTGACCGTCTA GATTTCACAAGTGTTGGCCTCTTCCATCACGATGGTCCCTTTGATGCCTGCGCCCCTTCCCGCAACAAGCAGCGA AACAAGGCCCCTCTATACGCATGGACCAATCCCCCAGATCCAGTTCAGTATGGCGATAGTGCTTATCCATCTGCC CACGCCTATGCCGCCTTTTCTAATGACTATCCCGAACCACCAAAAAAGAAGGTCGATGCCATAGCCGAGGCCTGG GGGATACACGAACCAGAACCTTATGAAGAGTTTTTCGCTGGCGGTGGCGGCTCCACTCGCCCAGACGGTGACACC CCAACTAGTTCGATCTACAACGGGAGAGATTCACACTCCAATCCGGTTACACGCAGTGGTCTCCCTAAACGAGTT GGTGATGACGCTCAGGGCAATAAAGAGCGGACTCGCGGCGCCACCCGTCGTTCCCTTGTCCCGCCGCCTCAACCA ATATTTGTCCCAGATCCCATTGAACGCCTCGATTCAGGTGCCATCCCGTCACCGGATCCTAAGCGGCAAAAATCT ATTATGCAAAGAATACGTAAGATGCGCGACTCGCCAAACGTTCCCGTCACATCCGAATATGATCAACCGTCTTCC CCTAATTCTGCCTTTGACCAACCCTACTCTCCCACGCAGCCTACCAGACCCTCTCACAAGTCCCAGAATTCCTTC CTCGGGCGATTTGGTAATAAGGCGCAGCCCCAAAGTGCAGACAAACCTGAACCTTTCGTTTTAATCGAACCTTTG CCATCGAGTAACAAAGATTTACCACCAGCCCCTACAATGAACGTGACGTCCTCCGGGGAAAGTGCACAACATGGA TCTCCGGAATTTGGATCTCCCGGTATTGGCCGGAAAACTAGCCTCATGAAGAAAGTTGGAAGAGTTGTGCGTGGG ACCAGATGA
Gene	>Agabi119p4\|010210 ATGGCTGCAGTCCGCACCCACACATCCTCCTCAGACCCTTTCCTCGACCCCGCGGCTCCCCCCACTCATCGCCCG CCGCCACCCCCGCCCAAGCAGCCCCCGTCGGCCAACATGCCTAGGCCAGCCCCTCCCTCCAAAGACATCCACGAT ATCACCGAAGCTGTAAGAGACACCGTCACCCTTCGAGATCGCAGCGACGGCACCCGCGCCCGCGTTGGACGCAGC ACAACTTCGATGTAAGGTTTCTCTACCCCCAATGGAAGATGACTTATGCCTCCCGATAGTGGGGCTCCAAACGCC AGCCCCCACCATAGCTCCAAACGCTCCCATTCTGAGGACTCTGCCATCGCCGAAAAATCCAAATCTTCTGGAAAG TCTCGAGGCAAGAAAGGTTCTCAGCACGCAGACGTCATTGACCGTCTAGATTTCACAAGTGTTGGCCGTGCGTTC TCTTGTCTGCACCTTGTCTTCGAATTCCTTCTAATCGATCAACCTCTCCCAGTCTTCCATCACGATGGTCCCTTT GATGCCTGCGCCCCTTCCCGCAACAAGCAGCGAAACAAGGCCCCTCTATACGCATGGACCAATCCCCCAGATCCA GTTCAGTATGGCGATAGTGCTTATCCATCTGCCCACGCCTATGCCGCCTTTTCTAATGACTATCCCGAACCACCA AAAAAGAAGGTCGATGCCATAGCCGAGGCCTGGGGGATACACGAACCAGAACCTTATGAAGAGTTTTTCGCTGGC GGTGGCGGCTCCACTCGCCCAGACGGTGACACCCCAACTAGTTCGATCTACAACGGGAGAGATTCACACTCCAAT CCGGTTACACGCAGTGGTCTCCCTAAACGAGTTGGTGATGACGCTCAGGGCAATAAAGAGCGGACTCGCGGCGCC ACCCGTCGTTCCCTTGTCCCGCCGCCTCAACCAATATTTGTCCCAGATCCCATTGAACGCCTCGATTCAGGTGCC ATCCCGTCACCGGATCCTAAGCGGCAAAAATCTATTATGCAAAGAATACGTAAGATGCGCGACTCGCCAAACGTT CCCGTCACATCCGAATATGATCAACCGTCTTCCCCTAATTCTGCCTTTGACCAACCCTACTCTCCCACGCAGCCT ACCAGACCCTCTCACAAGTCCCAGAATTCCTTCCTCGGGCGATTTGGTAATAAGGCGCAGCCCCAAAGTGCAGAC AAACCTGAACCTTTCGTTTTAATCGAACCTTTGCCATCGAGTAACAAAGATTTACCACCAGCCCCTACAATGAAC GTGACGTCCTCCGGGGAAAGTGCACAACATGGATCTCCGGAATTTGGATCTCCCGGTATTGGCCGGAAAACTAGC CTCATGAAGAAAGTTGGAAGAGTTGTGCGTGGGACCAGATGA

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