Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|010210
Gene name
Locationscaffold_01a:2395389..2396781
Strand-
Gene length (bp)1392
Transcript length (bp)1284
Coding sequence length (bp)1284
Protein length (aa) 428

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08316 Pal1 Pal1 cell morphology protein 9.2E-15 120 160

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38809|YHP7_YEAST Uncharacterized protein YHR097C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR097C PE=1 SV=1 102 158 3.0E-08
sp|Q9UU83|PAL1_SCHPO Protein pal1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pal1 PE=1 SV=1 112 165 1.0E-07
sp|Q05518|PAL1_YEAST Protein PAL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAL1 PE=1 SV=1 9 158 3.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|010210
MAAVRTHTSSSDPFLDPAAPPTHRPPPPPPKQPPSANMPRPAPPSKDIHDITEAVRDTVTLRDRSDGTRARVGRS
TTSIGAPNASPHHSSKRSHSEDSAIAEKSKSSGKSRGKKGSQHADVIDRLDFTSVGLFHHDGPFDACAPSRNKQR
NKAPLYAWTNPPDPVQYGDSAYPSAHAYAAFSNDYPEPPKKKVDAIAEAWGIHEPEPYEEFFAGGGGSTRPDGDT
PTSSIYNGRDSHSNPVTRSGLPKRVGDDAQGNKERTRGATRRSLVPPPQPIFVPDPIERLDSGAIPSPDPKRQKS
IMQRIRKMRDSPNVPVTSEYDQPSSPNSAFDQPYSPTQPTRPSHKSQNSFLGRFGNKAQPQSADKPEPFVLIEPL
PSSNKDLPPAPTMNVTSSGESAQHGSPEFGSPGIGRKTSLMKKVGRVVRGTR*
Coding >Agabi119p4|010210
ATGGCTGCAGTCCGCACCCACACATCCTCCTCAGACCCTTTCCTCGACCCCGCGGCTCCCCCCACTCATCGCCCG
CCGCCACCCCCGCCCAAGCAGCCCCCGTCGGCCAACATGCCTAGGCCAGCCCCTCCCTCCAAAGACATCCACGAT
ATCACCGAAGCTGTAAGAGACACCGTCACCCTTCGAGATCGCAGCGACGGCACCCGCGCCCGCGTTGGACGCAGC
ACAACTTCGATTGGGGCTCCAAACGCCAGCCCCCACCATAGCTCCAAACGCTCCCATTCTGAGGACTCTGCCATC
GCCGAAAAATCCAAATCTTCTGGAAAGTCTCGAGGCAAGAAAGGTTCTCAGCACGCAGACGTCATTGACCGTCTA
GATTTCACAAGTGTTGGCCTCTTCCATCACGATGGTCCCTTTGATGCCTGCGCCCCTTCCCGCAACAAGCAGCGA
AACAAGGCCCCTCTATACGCATGGACCAATCCCCCAGATCCAGTTCAGTATGGCGATAGTGCTTATCCATCTGCC
CACGCCTATGCCGCCTTTTCTAATGACTATCCCGAACCACCAAAAAAGAAGGTCGATGCCATAGCCGAGGCCTGG
GGGATACACGAACCAGAACCTTATGAAGAGTTTTTCGCTGGCGGTGGCGGCTCCACTCGCCCAGACGGTGACACC
CCAACTAGTTCGATCTACAACGGGAGAGATTCACACTCCAATCCGGTTACACGCAGTGGTCTCCCTAAACGAGTT
GGTGATGACGCTCAGGGCAATAAAGAGCGGACTCGCGGCGCCACCCGTCGTTCCCTTGTCCCGCCGCCTCAACCA
ATATTTGTCCCAGATCCCATTGAACGCCTCGATTCAGGTGCCATCCCGTCACCGGATCCTAAGCGGCAAAAATCT
ATTATGCAAAGAATACGTAAGATGCGCGACTCGCCAAACGTTCCCGTCACATCCGAATATGATCAACCGTCTTCC
CCTAATTCTGCCTTTGACCAACCCTACTCTCCCACGCAGCCTACCAGACCCTCTCACAAGTCCCAGAATTCCTTC
CTCGGGCGATTTGGTAATAAGGCGCAGCCCCAAAGTGCAGACAAACCTGAACCTTTCGTTTTAATCGAACCTTTG
CCATCGAGTAACAAAGATTTACCACCAGCCCCTACAATGAACGTGACGTCCTCCGGGGAAAGTGCACAACATGGA
TCTCCGGAATTTGGATCTCCCGGTATTGGCCGGAAAACTAGCCTCATGAAGAAAGTTGGAAGAGTTGTGCGTGGG
ACCAGATGA
Transcript >Agabi119p4|010210
ATGGCTGCAGTCCGCACCCACACATCCTCCTCAGACCCTTTCCTCGACCCCGCGGCTCCCCCCACTCATCGCCCG
CCGCCACCCCCGCCCAAGCAGCCCCCGTCGGCCAACATGCCTAGGCCAGCCCCTCCCTCCAAAGACATCCACGAT
ATCACCGAAGCTGTAAGAGACACCGTCACCCTTCGAGATCGCAGCGACGGCACCCGCGCCCGCGTTGGACGCAGC
ACAACTTCGATTGGGGCTCCAAACGCCAGCCCCCACCATAGCTCCAAACGCTCCCATTCTGAGGACTCTGCCATC
GCCGAAAAATCCAAATCTTCTGGAAAGTCTCGAGGCAAGAAAGGTTCTCAGCACGCAGACGTCATTGACCGTCTA
GATTTCACAAGTGTTGGCCTCTTCCATCACGATGGTCCCTTTGATGCCTGCGCCCCTTCCCGCAACAAGCAGCGA
AACAAGGCCCCTCTATACGCATGGACCAATCCCCCAGATCCAGTTCAGTATGGCGATAGTGCTTATCCATCTGCC
CACGCCTATGCCGCCTTTTCTAATGACTATCCCGAACCACCAAAAAAGAAGGTCGATGCCATAGCCGAGGCCTGG
GGGATACACGAACCAGAACCTTATGAAGAGTTTTTCGCTGGCGGTGGCGGCTCCACTCGCCCAGACGGTGACACC
CCAACTAGTTCGATCTACAACGGGAGAGATTCACACTCCAATCCGGTTACACGCAGTGGTCTCCCTAAACGAGTT
GGTGATGACGCTCAGGGCAATAAAGAGCGGACTCGCGGCGCCACCCGTCGTTCCCTTGTCCCGCCGCCTCAACCA
ATATTTGTCCCAGATCCCATTGAACGCCTCGATTCAGGTGCCATCCCGTCACCGGATCCTAAGCGGCAAAAATCT
ATTATGCAAAGAATACGTAAGATGCGCGACTCGCCAAACGTTCCCGTCACATCCGAATATGATCAACCGTCTTCC
CCTAATTCTGCCTTTGACCAACCCTACTCTCCCACGCAGCCTACCAGACCCTCTCACAAGTCCCAGAATTCCTTC
CTCGGGCGATTTGGTAATAAGGCGCAGCCCCAAAGTGCAGACAAACCTGAACCTTTCGTTTTAATCGAACCTTTG
CCATCGAGTAACAAAGATTTACCACCAGCCCCTACAATGAACGTGACGTCCTCCGGGGAAAGTGCACAACATGGA
TCTCCGGAATTTGGATCTCCCGGTATTGGCCGGAAAACTAGCCTCATGAAGAAAGTTGGAAGAGTTGTGCGTGGG
ACCAGATGA
Gene >Agabi119p4|010210
ATGGCTGCAGTCCGCACCCACACATCCTCCTCAGACCCTTTCCTCGACCCCGCGGCTCCCCCCACTCATCGCCCG
CCGCCACCCCCGCCCAAGCAGCCCCCGTCGGCCAACATGCCTAGGCCAGCCCCTCCCTCCAAAGACATCCACGAT
ATCACCGAAGCTGTAAGAGACACCGTCACCCTTCGAGATCGCAGCGACGGCACCCGCGCCCGCGTTGGACGCAGC
ACAACTTCGATGTAAGGTTTCTCTACCCCCAATGGAAGATGACTTATGCCTCCCGATAGTGGGGCTCCAAACGCC
AGCCCCCACCATAGCTCCAAACGCTCCCATTCTGAGGACTCTGCCATCGCCGAAAAATCCAAATCTTCTGGAAAG
TCTCGAGGCAAGAAAGGTTCTCAGCACGCAGACGTCATTGACCGTCTAGATTTCACAAGTGTTGGCCGTGCGTTC
TCTTGTCTGCACCTTGTCTTCGAATTCCTTCTAATCGATCAACCTCTCCCAGTCTTCCATCACGATGGTCCCTTT
GATGCCTGCGCCCCTTCCCGCAACAAGCAGCGAAACAAGGCCCCTCTATACGCATGGACCAATCCCCCAGATCCA
GTTCAGTATGGCGATAGTGCTTATCCATCTGCCCACGCCTATGCCGCCTTTTCTAATGACTATCCCGAACCACCA
AAAAAGAAGGTCGATGCCATAGCCGAGGCCTGGGGGATACACGAACCAGAACCTTATGAAGAGTTTTTCGCTGGC
GGTGGCGGCTCCACTCGCCCAGACGGTGACACCCCAACTAGTTCGATCTACAACGGGAGAGATTCACACTCCAAT
CCGGTTACACGCAGTGGTCTCCCTAAACGAGTTGGTGATGACGCTCAGGGCAATAAAGAGCGGACTCGCGGCGCC
ACCCGTCGTTCCCTTGTCCCGCCGCCTCAACCAATATTTGTCCCAGATCCCATTGAACGCCTCGATTCAGGTGCC
ATCCCGTCACCGGATCCTAAGCGGCAAAAATCTATTATGCAAAGAATACGTAAGATGCGCGACTCGCCAAACGTT
CCCGTCACATCCGAATATGATCAACCGTCTTCCCCTAATTCTGCCTTTGACCAACCCTACTCTCCCACGCAGCCT
ACCAGACCCTCTCACAAGTCCCAGAATTCCTTCCTCGGGCGATTTGGTAATAAGGCGCAGCCCCAAAGTGCAGAC
AAACCTGAACCTTTCGTTTTAATCGAACCTTTGCCATCGAGTAACAAAGATTTACCACCAGCCCCTACAATGAAC
GTGACGTCCTCCGGGGAAAGTGCACAACATGGATCTCCGGAATTTGGATCTCCCGGTATTGGCCGGAAAACTAGC
CTCATGAAGAAAGTTGGAAGAGTTGTGCGTGGGACCAGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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