Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|009740
Gene name
Locationscaffold_01a:2283666..2284978
Strand-
Gene length (bp)1312
Transcript length (bp)984
Coding sequence length (bp)984
Protein length (aa) 328

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 4.4E-20 29 310
PF12697 Abhydrolase_6 Alpha/beta hydrolase family 4.4E-17 31 316
PF12146 Hydrolase_4 Serine aminopeptidase, S33 3.6E-10 26 301

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1 27 324 3.0E-29
sp|P34914|HYES_MOUSE Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2 29 324 7.0E-29
sp|P34913|HYES_HUMAN Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2 29 324 2.0E-28
sp|P80299|HYES_RAT Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1 29 324 4.0E-27
sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2 10 166 2.0E-18
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1 27 324 3.0E-29
sp|P34914|HYES_MOUSE Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2 29 324 7.0E-29
sp|P34913|HYES_HUMAN Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2 29 324 2.0E-28
sp|P80299|HYES_RAT Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1 29 324 4.0E-27
sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2 10 166 2.0E-18
sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2 10 152 2.0E-18
sp|O31581|YFHM_BACSU AB hydrolase superfamily protein YfhM OS=Bacillus subtilis (strain 168) GN=yfhM PE=3 SV=1 9 120 1.0E-15
sp|Q0IIS3|EPHX3_XENTR Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1 14 120 2.0E-15
sp|Q9H6B9|EPHX3_HUMAN Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1 10 120 4.0E-12
sp|Q3V1F8|EPHX3_MOUSE Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2 10 120 2.0E-11
sp|G5EBI4|CEEH1_CAEEL Epoxide hydrolase 1 OS=Caenorhabditis elegans GN=ceeh-1 PE=1 SV=1 19 120 2.0E-10
sp|G5EDL5|CEEH2_CAEEL Epoxide hydrolase 2 OS=Caenorhabditis elegans GN=ceeh-2 PE=1 SV=1 9 115 2.0E-10
sp|Q98C03|DHAA_RHILO Haloalkane dehalogenase OS=Rhizobium loti (strain MAFF303099) GN=dhaA PE=3 SV=1 27 128 3.0E-10
sp|B4RF90|DHMA_PHEZH Haloalkane dehalogenase OS=Phenylobacterium zucineum (strain HLK1) GN=dhmA PE=3 SV=1 24 124 4.0E-10
sp|Q73Y99|DHMA_MYCPA Haloalkane dehalogenase OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=dhmA PE=3 SV=1 19 134 1.0E-09
sp|Q93K00|DHMA_MYCAV Haloalkane dehalogenase OS=Mycobacterium avium GN=dhmA PE=1 SV=1 19 134 1.0E-09
sp|Q1JU72|DEHA_BURSP Fluoroacetate dehalogenase OS=Burkholderia sp. GN=fac-dex PE=1 SV=1 27 130 2.0E-09
sp|Q1QBB9|DHMA_PSYCK Haloalkane dehalogenase OS=Psychrobacter cryohalolentis (strain K5) GN=dhmA PE=3 SV=1 19 122 2.0E-09
sp|B0SY51|DHMA_CAUSK Haloalkane dehalogenase OS=Caulobacter sp. (strain K31) GN=dhmA PE=3 SV=1 19 125 3.0E-09
sp|Q9A919|DHMA_CAUCR Haloalkane dehalogenase OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=dhmA PE=3 SV=1 24 122 5.0E-09
sp|B8H3S9|DHMA_CAUCN Haloalkane dehalogenase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dhmA PE=3 SV=1 24 122 5.0E-09
sp|B2HJU9|DHMA_MYCMM Haloalkane dehalogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=dhmA PE=3 SV=1 19 134 3.0E-08
sp|P64302|DHMA1_MYCBO Haloalkane dehalogenase 1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=dhmA1 PE=3 SV=1 19 134 4.0E-08
sp|P9WMS2|DHMA1_MYCTO Haloalkane dehalogenase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=dhmA1 PE=3 SV=1 19 134 4.0E-08
sp|P9WMS3|DHMA1_MYCTU Haloalkane dehalogenase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=dhmA1 PE=1 SV=1 19 134 4.0E-08
sp|P53750|YN93_YEAST Uncharacterized hydrolase YNR064C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNR064C PE=3 SV=1 19 124 1.0E-07
sp|P59337|DHAA_BRADU Haloalkane dehalogenase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=dhaA PE=1 SV=1 24 143 2.0E-07
sp|Q6NAM1|DEHA_RHOPA Fluoroacetate dehalogenase OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=RPA1163 PE=1 SV=1 29 166 2.0E-07
sp|P0A573|Y2734_MYCBO Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1 9 123 4.0E-07
sp|P9WNH3|Y2715_MYCTU Uncharacterized protein Rv2715 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2715 PE=1 SV=1 9 123 4.0E-07
sp|P9WNH2|Y2715_MYCTO Uncharacterized protein MT2788 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2788 PE=3 SV=1 9 123 4.0E-07
sp|P29715|BPOA2_STRAU Non-haem bromoperoxidase BPO-A2 OS=Streptomyces aureofaciens GN=bpoA2 PE=1 SV=3 27 129 2.0E-06
sp|O31168|PRXC_STRAU Non-heme chloroperoxidase OS=Streptomyces aureofaciens GN=cpo PE=1 SV=1 31 129 2.0E-06
sp|P0A3G4|DHAA_PSEPV Haloalkane dehalogenase OS=Pseudomonas pavonaceae GN=dhaA PE=1 SV=1 9 156 3.0E-06
sp|O52866|HYES_CORS2 Soluble epoxide hydrolase OS=Corynebacterium sp. (strain C12) PE=1 SV=3 14 115 3.0E-06
sp|Q9ZER0|DHAA_MYCSX Haloalkane dehalogenase OS=Mycobacterium sp. (strain GP1) GN=dhaAF PE=2 SV=1 9 156 3.0E-06
sp|P59336|DHAA_RHOSD Haloalkane dehalogenase OS=Rhodococcus sp. (strain TDTM0003) GN=dhaA PE=1 SV=1 9 156 3.0E-06
sp|P0A3G2|DHAA_RHORH Haloalkane dehalogenase OS=Rhodococcus rhodochrous GN=dhaA PE=1 SV=1 9 156 3.0E-06
sp|P0A3G3|DHAA_RHOSO Haloalkane dehalogenase OS=Rhodococcus sp. GN=dhaA PE=1 SV=1 9 156 3.0E-06
sp|Q8R0P8|ABHD8_MOUSE Abhydrolase domain-containing protein 8 OS=Mus musculus GN=Abhd8 PE=2 SV=1 24 120 6.0E-06
sp|Q96I13|ABHD8_HUMAN Abhydrolase domain-containing protein 8 OS=Homo sapiens GN=ABHD8 PE=2 SV=1 24 120 6.0E-06
sp|Q17QP1|ABHD8_BOVIN Abhydrolase domain-containing protein 8 OS=Bos taurus GN=ABHD8 PE=2 SV=1 24 120 6.0E-06
sp|Q4R584|ABHD8_MACFA Abhydrolase domain-containing protein 8 OS=Macaca fascicularis GN=ABHD8 PE=2 SV=1 24 120 6.0E-06
sp|Q6Q3H0|DHLA_XANFL Haloalkane dehalogenase OS=Xanthobacter flavus GN=dhlA PE=3 SV=1 14 122 7.0E-06
sp|P22643|DHLA_XANAU Haloalkane dehalogenase OS=Xanthobacter autotrophicus GN=dhlA PE=1 SV=2 14 122 7.0E-06
sp|C5CN82|RUTD_VARPS Putative aminoacrylate hydrolase RutD OS=Variovorax paradoxus (strain S110) GN=rutD PE=3 SV=1 19 122 9.0E-06
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|009740
MDSSSYKDFITSRGYNYHYYFAPGQETKPTLLLLHGFPSLANDWHNQVTSLRAHGYGFIVPDMLGYGGTAKPTDA
NDYKQSLMVKDLIDILDAEKITRCVVIGHDWGSIVTARLANYYPDRFLGFGFLAVGYLPPNPAHTYEDTLELMRK
SFGSERLGYQSFFAEPDGHILCEKNFDTFYSIVHPKDYGTIWPQALYSLGETRKWIERNVPVEIEPSIPEEEHAY
KREQLKKSGLRAAMCWYTVSVKNLELEEIKQIPHSAYTIEKPVFLGLTEKDPLCPPAISKPSAEQFCKNVTIKVF
DCGHWIFWEKRDEFNKELAAWLETLGH*
Coding >Agabi119p4|009740
ATGGATTCAAGCAGCTATAAGGATTTCATCACCTCTCGCGGTTACAACTATCACTACTACTTCGCACCTGGACAG
GAGACAAAACCCACCCTCCTCCTCCTTCATGGCTTTCCAAGCTTAGCAAATGACTGGCATAACCAAGTAACGAGC
CTCCGAGCTCACGGTTACGGGTTCATTGTTCCAGATATGCTTGGATATGGTGGTACTGCTAAACCAACGGACGCA
AATGACTACAAGCAGAGTCTCATGGTCAAAGACTTGATCGACATCCTTGATGCGGAAAAGATAACCCGTTGCGTC
GTCATCGGCCATGACTGGGGTTCCATAGTTACTGCTCGCCTTGCCAATTATTATCCCGATCGCTTCTTGGGATTC
GGTTTCCTGGCTGTTGGTTATTTACCCCCAAATCCCGCTCACACTTATGAAGACACCCTGGAGCTGATGAGAAAG
TCATTTGGATCAGAGAGACTTGGTTATCAATCTTTTTTTGCTGAACCGGACGGCCATATTTTATGCGAAAAGAAC
TTTGACACCTTTTACAGCATCGTTCACCCCAAGGATTACGGCACCATATGGCCTCAGGCCCTATACAGTTTAGGC
GAGACCAGAAAGTGGATTGAACGCAATGTGCCAGTTGAGATAGAGCCTTCAATTCCAGAAGAAGAACATGCGTAT
AAGAGGGAGCAGCTCAAGAAAAGCGGTCTCAGAGCAGCCATGTGTTGGTACACAGTTTCGGTCAAAAATCTTGAA
TTGGAAGAAATTAAACAAATTCCACACTCGGCCTACACAATTGAAAAACCCGTTTTTCTCGGTCTCACAGAGAAA
GATCCTCTTTGCCCTCCAGCCATCTCAAAGCCATCAGCAGAGCAGTTCTGCAAGAATGTTACTATAAAAGTCTTC
GATTGTGGTCATTGGATCTTCTGGGAGAAGAGAGATGAGTTCAATAAAGAGCTCGCTGCTTGGCTAGAGACTTTG
GGACACTGA
Transcript >Agabi119p4|009740
ATGGATTCAAGCAGCTATAAGGATTTCATCACCTCTCGCGGTTACAACTATCACTACTACTTCGCACCTGGACAG
GAGACAAAACCCACCCTCCTCCTCCTTCATGGCTTTCCAAGCTTAGCAAATGACTGGCATAACCAAGTAACGAGC
CTCCGAGCTCACGGTTACGGGTTCATTGTTCCAGATATGCTTGGATATGGTGGTACTGCTAAACCAACGGACGCA
AATGACTACAAGCAGAGTCTCATGGTCAAAGACTTGATCGACATCCTTGATGCGGAAAAGATAACCCGTTGCGTC
GTCATCGGCCATGACTGGGGTTCCATAGTTACTGCTCGCCTTGCCAATTATTATCCCGATCGCTTCTTGGGATTC
GGTTTCCTGGCTGTTGGTTATTTACCCCCAAATCCCGCTCACACTTATGAAGACACCCTGGAGCTGATGAGAAAG
TCATTTGGATCAGAGAGACTTGGTTATCAATCTTTTTTTGCTGAACCGGACGGCCATATTTTATGCGAAAAGAAC
TTTGACACCTTTTACAGCATCGTTCACCCCAAGGATTACGGCACCATATGGCCTCAGGCCCTATACAGTTTAGGC
GAGACCAGAAAGTGGATTGAACGCAATGTGCCAGTTGAGATAGAGCCTTCAATTCCAGAAGAAGAACATGCGTAT
AAGAGGGAGCAGCTCAAGAAAAGCGGTCTCAGAGCAGCCATGTGTTGGTACACAGTTTCGGTCAAAAATCTTGAA
TTGGAAGAAATTAAACAAATTCCACACTCGGCCTACACAATTGAAAAACCCGTTTTTCTCGGTCTCACAGAGAAA
GATCCTCTTTGCCCTCCAGCCATCTCAAAGCCATCAGCAGAGCAGTTCTGCAAGAATGTTACTATAAAAGTCTTC
GATTGTGGTCATTGGATCTTCTGGGAGAAGAGAGATGAGTTCAATAAAGAGCTCGCTGCTTGGCTAGAGACTTTG
GGACACTGA
Gene >Agabi119p4|009740
ATGGATTCAAGCAGCTATAAGGATTTCATCACCTCTCGCGGTTACAACTATCACTACTACTTCGCACCTGGACAG
GAGACAAAACCCACCCTCCTCCTCCTTCATGGCTTTCCAAGCTTAGCAAATGACTGGCATAACCAAGTAACGAGC
CTCCGAGCTCACGGTTACGGGTTCATTGTTCCAGATATGCTTGGATATGGTGGTACTGCTAAACCAACGGACGCA
AATGACTACAAGCAGAGTCTCATGGTCAAAGACTTGATCGACATCCTTGATGCGGAAAAGATAACCCGTTGCGTC
GTCATCGGCCATGACTGGTGACTATCGTCATTACGATGTAGCGCTGGCGATGCTCAATCAGATACAGGGGTTCCA
TAGTTACTGCTCGCCTTGCCAATTATTATCCCGATCGCTTCTTGGGATTCGGTTTCCTGGCTGTTGGTTATTTAC
CCCCAAATCCCGCTCACACTTATGAAGACACCCTGGAGCTGGTGAGCCATCGCCTAGTATACAGATCCAAAGAAC
CAATGTCTAACGCCCCCAAAGATGAGAAAGTCATTTGGATCAGAGAGACTTGGTTATCAGTATGGTTTTATGATT
CAACGCTTCATCTTTAGCCTCAAACCAAAACCAGATCTTTTTTTGCTGAACCGGACGGCCATATTTTATGCGAAA
AGAACGTATGTTTGTCTATAGCGAATGCTTGCGAGCTCAAACGATAATGACATCTCTCTTGTAGTTTGACACCTT
TTACAGCATCGTTCACCCCAAGGATTACGGCACCATATGGCCTCAGGCCCTATACAGTTTAGGCGAGACCAGAAA
GTGGATTGAACGCAATGTGCCAGTTGAGATAGAGCCTTCAATTCCAGAAGAAGTATAGATCTACAAATAAATGCC
ACTCGAATCTGTACTGACGCTAGCAATTCAAGGAACATGCGTATAAGAGGGAGCAGCTCAAGAAAAGCGGTCTCA
GAGCAGCCATGTGTTGGTACACAGTTTCGGTCAAAAATCTTGAATTGGAAGAAATTAAACGTGCGCCATTCCACA
TTCTCCATAATCCTTATCAGGGTGACTATTTAACAACACAACAGAAATTCCACACTCGGCCTACACAATTGAAAA
ACCCGTTTTTCTCGGTCTCACAGAGAAAGATCCTCTTTGCCCTCCAGCCATCTCAAAGCCATCAGCAGAGCAGTT
CTGCAAGAATGTTACTATAAAAGTCTTCGATTGTGGTCATTGGATCTTCTGGGAGAAGAGAGATGAGTTCAATAA
AGAGCTCGCTGCTTGGCTAGAGACTTTGGGACACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail