Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|008090
Gene name
Location	scaffold_01a:1900565..1902730
Strand	+
Gene length (bp)	2165
Transcript length (bp)	1644
Coding sequence length (bp)	1644
Protein length (aa)	548

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10537	WAC_Acf1_DNA_bd	ATP-utilising chromatin assembly and remodelling N-terminal	1.5E-34	29	129
PF02791	DDT	DDT domain	1.1E-06	407	436

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53125\|ITC1_YEAST	Imitation switch two complex protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ITC1 PE=1 SV=1	29	131	1.0E-17
sp\|O88379\|BAZ1A_MOUSE	Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus GN=Baz1a PE=1 SV=3	1	148	1.0E-13
sp\|Q9NRL2\|BAZ1A_HUMAN	Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens GN=BAZ1A PE=1 SV=2	1	148	2.0E-13
sp\|Q08964\|YP216_YEAST	Putative ISWI chromatin-remodeling complex subunit YPL216W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL216W PE=1 SV=1	33	131	3.0E-10
sp\|Q54ST3\|Y2237_DICDI	DDT domain-containing protein DDB_G0282237 OS=Dictyostelium discoideum GN=DDB_G0282237 PE=3 SV=1	27	156	9.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
DDT

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|008090 MPTCRRKRVVLTEPTEELVRALETDPGREVFYLEETGEIFETYESYAARMSFYRLKQFQCEVTGKSGLDYFQAVE SERQEARTMHARFSEPLKSPVLRAVQWQVMGRLDHLVEAVFDRFKDRYFKSEKVLVDIEGVKYYGLIEKVYPPRF SADQQARDAFKDTDLSERTLDEEQPHLYGGDLNIPIQEANTKDNPELYYYWVHILELEKDKGEKSKVAKTATEKD TKVIGSVMECQCNTLSRDRLSFSKSILRRFIRDCVDRDAAVASPWTVKPLIAKHYGVSSIMPEETRKGVEDIKKG EIDKRKKVWEDREGPPTKKQKKMTAGQEGKVGRKEREAQEKAEKERLAKEEAEAERIAVEKKKKRPVRYPTEDLD IRINDKDKKAGIHLQRPMAQRSGLPCNDSPNTFESMLLCWNFLNAYGEPLHVWHFTLDDLACEIHSNLIYNLRTV PFTRHNATLSLLKLKETFGSEHEVFGVTVEQLMGALADVGNNWERVPLRHGEGREGWEDALVGCLKDHATLENFP RLREILTQLFFSPPQDILFAVS*
Coding	>Agabi119p4\|008090 ATGCCTACTTGTCGCCGTAAGCGCGTAGTCCTCACCGAGCCCACGGAGGAGCTTGTCCGCGCTCTTGAAACAGAC CCTGGGCGCGAGGTCTTCTACCTCGAGGAGACCGGCGAAATCTTCGAGACCTACGAGTCTTATGCTGCTCGCATG TCCTTCTATCGGCTCAAGCAGTTCCAGTGCGAGGTCACCGGCAAAAGCGGTCTTGACTATTTTCAGGCAGTGGAA AGTGAACGCCAGGAGGCCCGTACCATGCATGCTCGCTTCTCCGAACCCCTCAAGTCCCCTGTACTGAGAGCGGTG CAATGGCAGGTCATGGGTCGTCTCGATCATCTTGTTGAAGCTGTCTTCGACCGCTTCAAGGATCGCTATTTTAAA AGCGAGAAGGTGCTTGTAGATATTGAAGGCGTCAAATACTACGGTCTTATTGAAAAGGTCTATCCGCCTCGCTTT AGTGCTGACCAGCAGGCAAGAGACGCCTTCAAGGACACTGATCTTTCCGAAAGAACTCTTGACGAAGAACAACCC CATCTATATGGAGGCGACCTGAACATTCCAATACAGGAGGCAAATACGAAAGACAATCCCGAGTTATACTATTAC TGGGTCCATATCCTCGAACTTGAGAAGGACAAGGGAGAAAAGAGTAAGGTGGCCAAAACAGCCACAGAAAAGGAC ACCAAGGTCATTGGGAGTGTCATGGAGTGTCAGTGTAATACTTTAAGTCGCGACCGCTTATCCTTTTCAAAATCG ATACTTCGTCGGTTTATTCGTGATTGCGTAGATCGCGATGCTGCTGTTGCTTCTCCCTGGACCGTCAAACCACTA ATCGCCAAACATTATGGTGTGAGCTCTATCATGCCTGAAGAAACCCGCAAAGGGGTGGAAGATATTAAAAAGGGC GAAATCGACAAACGGAAAAAAGTTTGGGAGGACAGAGAAGGTCCCCCGACTAAGAAACAAAAGAAAATGACGGCT GGGCAAGAGGGCAAAGTTGGGAGGAAGGAACGCGAAGCTCAAGAAAAAGCGGAGAAGGAGAGACTGGCAAAAGAA GAGGCAGAGGCAGAGCGTATAGCTGTCGAGAAAAAGAAGAAACGGCCTGTTCGCTACCCAACAGAAGACCTTGAT ATCCGAATAAATGACAAAGATAAGAAAGCAGGTATTCATTTGCAACGCCCAATGGCTCAGCGGTCTGGTCTCCCT TGCAATGATTCTCCGAATACCTTTGAGTCGATGCTGCTTTGTTGGAACTTCTTGAACGCTTACGGTGAACCCCTG CATGTGTGGCATTTCACACTCGATGATCTGGCTTGCGAAATTCACTCGAATCTCATTTACAATCTTCGGACAGTG CCCTTTACAAGGCATAATGCCACACTAAGCCTTCTGAAGCTCAAGGAAACCTTCGGCTCAGAACACGAGGTTTTT GGTGTCACCGTAGAGCAGTTGATGGGCGCACTGGCCGACGTGGGTAACAACTGGGAACGAGTTCCTCTTCGTCAT GGAGAGGGGCGCGAAGGTTGGGAGGATGCTTTGGTCGGTTGTTTGAAAGACCATGCTACCCTTGAAAATTTTCCT CGCCTAAGGGAAATCCTAACACAATTGTTCTTTTCACCCCCTCAGGACATACTATTCGCTGTCTCCTGA
Transcript	>Agabi119p4\|008090 ATGCCTACTTGTCGCCGTAAGCGCGTAGTCCTCACCGAGCCCACGGAGGAGCTTGTCCGCGCTCTTGAAACAGAC CCTGGGCGCGAGGTCTTCTACCTCGAGGAGACCGGCGAAATCTTCGAGACCTACGAGTCTTATGCTGCTCGCATG TCCTTCTATCGGCTCAAGCAGTTCCAGTGCGAGGTCACCGGCAAAAGCGGTCTTGACTATTTTCAGGCAGTGGAA AGTGAACGCCAGGAGGCCCGTACCATGCATGCTCGCTTCTCCGAACCCCTCAAGTCCCCTGTACTGAGAGCGGTG CAATGGCAGGTCATGGGTCGTCTCGATCATCTTGTTGAAGCTGTCTTCGACCGCTTCAAGGATCGCTATTTTAAA AGCGAGAAGGTGCTTGTAGATATTGAAGGCGTCAAATACTACGGTCTTATTGAAAAGGTCTATCCGCCTCGCTTT AGTGCTGACCAGCAGGCAAGAGACGCCTTCAAGGACACTGATCTTTCCGAAAGAACTCTTGACGAAGAACAACCC CATCTATATGGAGGCGACCTGAACATTCCAATACAGGAGGCAAATACGAAAGACAATCCCGAGTTATACTATTAC TGGGTCCATATCCTCGAACTTGAGAAGGACAAGGGAGAAAAGAGTAAGGTGGCCAAAACAGCCACAGAAAAGGAC ACCAAGGTCATTGGGAGTGTCATGGAGTGTCAGTGTAATACTTTAAGTCGCGACCGCTTATCCTTTTCAAAATCG ATACTTCGTCGGTTTATTCGTGATTGCGTAGATCGCGATGCTGCTGTTGCTTCTCCCTGGACCGTCAAACCACTA ATCGCCAAACATTATGGTGTGAGCTCTATCATGCCTGAAGAAACCCGCAAAGGGGTGGAAGATATTAAAAAGGGC GAAATCGACAAACGGAAAAAAGTTTGGGAGGACAGAGAAGGTCCCCCGACTAAGAAACAAAAGAAAATGACGGCT GGGCAAGAGGGCAAAGTTGGGAGGAAGGAACGCGAAGCTCAAGAAAAAGCGGAGAAGGAGAGACTGGCAAAAGAA GAGGCAGAGGCAGAGCGTATAGCTGTCGAGAAAAAGAAGAAACGGCCTGTTCGCTACCCAACAGAAGACCTTGAT ATCCGAATAAATGACAAAGATAAGAAAGCAGGTATTCATTTGCAACGCCCAATGGCTCAGCGGTCTGGTCTCCCT TGCAATGATTCTCCGAATACCTTTGAGTCGATGCTGCTTTGTTGGAACTTCTTGAACGCTTACGGTGAACCCCTG CATGTGTGGCATTTCACACTCGATGATCTGGCTTGCGAAATTCACTCGAATCTCATTTACAATCTTCGGACAGTG CCCTTTACAAGGCATAATGCCACACTAAGCCTTCTGAAGCTCAAGGAAACCTTCGGCTCAGAACACGAGGTTTTT GGTGTCACCGTAGAGCAGTTGATGGGCGCACTGGCCGACGTGGGTAACAACTGGGAACGAGTTCCTCTTCGTCAT GGAGAGGGGCGCGAAGGTTGGGAGGATGCTTTGGTCGGTTGTTTGAAAGACCATGCTACCCTTGAAAATTTTCCT CGCCTAAGGGAAATCCTAACACAATTGTTCTTTTCACCCCCTCAGGACATACTATTCGCTGTCTCCTGA
Gene	>Agabi119p4\|008090 ATGCCTACTTGTCGCCGTAAGCGCGTAGTCCTCACCGAGCCCACGGAGGAGCTTGTCCGCGCTCTTGAAACAGAC CCTGGGCGCGAGGTCTTCTACCTCGAGGAGACCGGCGAAATCTTCGAGACCTACGAGTGCGTCCATCCTTCTTCT CCTCATTACGCCTCATCTTACCTCTCTCGTACAGGTCTTATGCTGCTCGCATGTCCTTCTATCGGCTCAAGCAGT TCCAGTGCGAGGTCACCGGCAAAAGCGGTCTTGACTATTTTCAGGCAGTGGAAAGTGAACGCCAGGAGGCCCGTA CCATGCATGCTCGCTTCTCCGAACCCCTCAAGTCCCCTGTACTGAGAGCGGTGCAATGGCGTATGTCCATCTCTA TCTATCTCTTGTCTAATATACTTAATTTCGCATCAAGAGGTCATGGGTCGTCTCGATCATCTTGTTGAAGCTGTC TTCGACCGCTTCAAGGATCGCTATTTTAAAAGCGAGAGTGCGTCTTCATAAACAACCCGCTCTTCCTTCCTAACT GTTATCTCTAGAGGTGCTTGTAGATATTGAAGGCGTCAAGTATGTTTGTCTCTTTTGACATCGTGCTCATACCAA TCAAGTTTCCACAGATACTACGGTCTTATTGAAAAGGTCTATCCGCCTCGCTTTAGTGCTGACCAGCAGGCAAGA GACGCCTTCAAGGACACTGATCTTTCCGAAAGAACTCTTGACGAAGAACAACCCCATCTATATGGAGGCGACCTG AACATTCCAATACAGGAGGCAAATACGAAAGACAATCCCGAGTTATACTATTACTGGGTCCATATCCTCGAACTT GAGAAGGACAAGGGAGAAAAGAGTAAGGTGGCCAAAACAGCCACAGAAAAGGACACCAAGGTCATTGGGAGTGTC ATGGAGTGTCAGTGTAATACTTTAAGGTGAGCTCGTTGCTATCCCCTGACTCTTATGTTGCTGGATCGTTTGCTA TCCTTCAGTCGCGACCGCTTATCCTTTTCAAAATCGATACTTCGTCGGTTTATTCGTGATTGCGTAGATCGCGAT GCTGCTGTTGCTTCTCCCTGGACCGTCAAACCACTAATCGCCAAACATTATGGTGTGAGCTCTATCATGCCTGAA GAAACCCGCAAAGGGGTGGAAGATATTAAAAAGGGCGAAATCGACAAACGGAAAAAAGTTTGGGAGGACAGAGAA GGTCCCCCGACTAAGAAACAAAAGAAAATGACGGCTGGGCAAGAGGGCAAAGGTGTGTTAACCCCGTTTTATCCT TTCTCCCGCCTTAGACCCGTTGCCCTTTGTAGTTGGGAGGAAGGAACGCGAAGCTCAAGAAAAAGCGGAGAAGGA GAGACTGGCAAAAGAAGAGGCAGAGGCAGAGCGTATAGCTGTCGAGAAAAAGAAGAAACGGCCTGTTCGCTACCC AACAGAAGACCTTGATATCCGAATAAATGACAAAGATAAGAAAGCAGGTATTCATTTGCAACGCCCAATGGCTCA GCGGTCTGGTCTCCCTTGCAATGATTCTCCGAATACCTTTGAGTCGATGCTGCTTTGTTGGAACTTCTTGAACGC TTACGGGTGGGTCAACCCCTGGTCTGCCTAAGTACTGTCTGATTTCATATTGTAGTGAACCCCTGCATGTGTGGC ATTTCACACTCGATGATCTGGCTTGTGCGTTGCAGCACACAATGTCCGATTTGCCATGCCCTTTATTAGGCGAAA TTCACTCGAATCTCATTTACAATCTTCGGACAGTGCCCTTTACAAGGCATAATGCCACACTAAGCCTTCTGAAGC TCAAGGAAACCTTCGGCTCAGAACACGAGGTTTTTGGTGTCACCGTAGAGCAGTTGATGGGCGCACTGGCCGACG TGGGTAACAACTGGGAACGAGTTCCTCTTCGTCATGGAGAGGGGCGCGAAGGTTGGGAGGATGCTTTGGTCGGTT GTTTGAAAGACGTACGTACCTCGAAGGTATAACCTATATAAAAACTTATATATTCCTTAGCATGCTACCCTTGAA AATTTTCCTCGCCTAAGGGAAATCCTAACACAATTGTTCTTTTCACCCCCTCAGGACGTCAGTGAAACTAGTTGC AGTGACGTTCAGACCCTCACACATCCTTCGTTGCCTGCTGAAAGATACTATTCGCTGTCTCCTGA

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