Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|007420
Gene name
Locationscaffold_01a:1747758..1750779
Strand-
Gene length (bp)3021
Transcript length (bp)2160
Coding sequence length (bp)2160
Protein length (aa) 720

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 3.3E-10 214 429
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 2.0E-06 32 57

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O59744|YN28_SCHPO Uncharacterized transcriptional regulatory protein C530.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.08 PE=3 SV=1 34 422 1.0E-07
sp|Q9UTN0|YII3_SCHPO Uncharacterized transcriptional regulatory protein C139.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC139.03 PE=3 SV=1 32 138 4.0E-06

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0065007 biological regulation No
GO:0019222 regulation of metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0005488 binding No
GO:0009889 regulation of biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0044238 primary metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0046872 metal ion binding No
GO:0006725 cellular aromatic compound metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0090304 nucleic acid metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003676 nucleic acid binding No
GO:0031323 regulation of cellular metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003674 molecular_function No
GO:0018130 heterocycle biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0010468 regulation of gene expression No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0050789 regulation of biological process No
GO:0043170 macromolecule metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0044237 cellular metabolic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0019438 aromatic compound biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0050794 regulation of cellular process No
GO:0016070 RNA metabolic process No
GO:0009987 cellular process No
GO:0051252 regulation of RNA metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0009058 biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043169 cation binding No
GO:1903506 regulation of nucleic acid-templated transcription No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|007420
MPKASQGSIQRSASSSDPLANPTHPNVLKRNQACHQCRRRKLKCDAKRPCSTCVRSHAHQLNHAPPGANIAAKPE
CTFDEVAETNIMPSEGPKSKYERLENRINELETLLRQKENKDQATLNVTPSDDIQSIQSSGSLVATGGVSQKQLN
TYPSNGSPSTRSLTRSPPHETFTSVQSSDNSLSTASIAYGLDVMWPNWPSNLPGPELLRHLVDVFFTFHPHANRL
FHASTFISSLSYGPSHPKFPCTAVLHAICAVGSLYTAAVTSPPLPDFDKIAPDEIFLEKHRLKEPRLDSFAEQQA
KYARETGERLNTLGENLFQVFQSTIVLTWFYWSHGRWVDVFMTSAYCVRLSIPLGLNMCPPFHSIAKSDRPPSII
APARTVIEDETRRNAFWLAYAMERQHGMGNGWALCLDDQDISQLLPVRGDQFEQGTLVTPLERQWAHAGDLLLTH
PESQIDSFILYIKGTILIARVKVFNTRFRARHYAGDTAVTNIRGDNISERYDPRGSSAFIELDHVASSFRSSFPS
HLRNPISNNVVDNHLYTASLMPHVATIVLHDPHAEVRQSGCISALKILTAARAILDMIYNVWSTSYDITLLDSFC
SLAWFTAGRVLVRFLQAAIDAEGQDQIATLRAELEFVHSAIVKLGQRIPLAYRFSKMLEDLVTKRCGESYSSSLR
AVFSRSAEPASLQSLPQGYTYNDLTGQIGFQENLHDTESFLSME*
Coding >Agabi119p4|007420
ATGCCCAAGGCATCTCAGGGGTCAATCCAACGTTCTGCTTCCTCATCAGATCCCCTCGCAAATCCTACCCATCCG
AATGTACTTAAGCGAAATCAGGCTTGTCACCAGTGTCGCAGAAGGAAACTAAAATGCGATGCCAAAAGACCGTGT
TCTACCTGCGTTCGCTCGCATGCTCATCAGCTAAACCATGCCCCCCCTGGTGCCAACATAGCAGCTAAACCAGAA
TGCACTTTTGACGAAGTTGCTGAAACCAATATCATGCCGTCAGAAGGTCCAAAAAGCAAATATGAGCGGCTTGAA
AACCGCATCAACGAACTGGAAACACTTCTCAGACAGAAAGAAAACAAGGACCAGGCGACCCTGAATGTTACACCT
TCAGATGACATTCAGAGTATTCAGTCTTCGGGTTCCCTGGTTGCTACCGGTGGTGTGTCCCAGAAGCAACTCAAC
ACATATCCATCGAATGGATCGCCGTCCACACGTAGCTTAACGCGTTCCCCACCCCATGAAACGTTCACTTCTGTT
CAGTCGTCCGATAATAGTCTTTCAACTGCATCCATTGCTTATGGGCTAGATGTGATGTGGCCTAACTGGCCTTCG
AATCTTCCTGGTCCAGAACTGCTGCGCCATTTGGTTGACGTCTTCTTCACCTTCCATCCCCATGCGAATCGCCTC
TTCCATGCTTCCACTTTCATCAGCTCGCTTTCTTATGGTCCTAGTCACCCCAAATTTCCTTGTACTGCGGTACTT
CACGCGATATGTGCTGTTGGAAGTCTATATACAGCCGCAGTCACGTCGCCTCCGCTTCCAGACTTCGACAAGATA
GCTCCAGATGAAATTTTTCTGGAGAAACACCGACTAAAGGAACCAAGATTAGATTCCTTCGCAGAGCAGCAGGCG
AAGTATGCTCGCGAAACTGGGGAGAGATTGAATACTTTGGGTGAAAACCTATTTCAAGTTTTCCAGTCTACCATT
GTTTTGACCTGGTTCTATTGGTCACACGGCAGATGGGTTGACGTGTTCATGACGTCTGCTTATTGTGTCAGGTTG
TCCATTCCACTGGGCCTCAACATGTGCCCACCATTTCATTCTATTGCCAAATCAGACAGACCACCCTCAATCATA
GCACCAGCACGGACAGTGATAGAAGATGAAACGAGGCGCAATGCTTTCTGGCTAGCGTATGCGATGGAACGTCAG
CATGGGATGGGAAATGGATGGGCTTTATGCCTTGACGACCAAGATATCTCACAACTCCTACCTGTTCGTGGAGAC
CAGTTCGAGCAAGGAACGCTAGTGACACCGTTGGAAAGACAATGGGCTCACGCTGGGGATCTACTGCTTACCCAT
CCTGAAAGCCAGATTGATTCTTTTATCTTGTATATCAAAGGGACTATCCTAATCGCTCGGGTTAAGGTCTTCAAT
ACACGTTTTAGAGCTCGGCATTATGCTGGTGATACGGCTGTCACCAATATCCGAGGTGACAACATTTCAGAACGC
TACGATCCTAGGGGATCCTCAGCTTTTATTGAGCTGGATCACGTCGCTTCGTCATTCAGGTCGTCGTTCCCCAGT
CATCTCCGCAATCCAATCAGCAATAATGTCGTGGACAATCATTTGTACACCGCCTCTTTGATGCCTCACGTAGCT
ACTATCGTACTCCATGATCCCCATGCCGAGGTTCGGCAGTCGGGATGCATATCTGCTCTCAAGATATTGACGGCC
GCAAGAGCCATACTAGACATGATATATAACGTGTGGTCTACGAGTTATGATATCACACTCCTGGACTCGTTTTGC
TCCCTTGCCTGGTTTACTGCGGGTCGCGTGTTAGTCAGGTTCCTCCAGGCCGCCATTGACGCGGAAGGGCAAGAT
CAAATCGCGACTCTGCGAGCCGAGCTCGAATTTGTGCATTCTGCCATCGTCAAGCTCGGACAGCGCATACCGCTC
GCATATCGTTTCTCAAAGATGTTAGAGGACCTTGTTACGAAACGTTGTGGAGAGAGCTATAGCTCTAGTTTACGA
GCTGTTTTCTCCCGTTCAGCGGAGCCTGCTTCGTTACAGTCTCTTCCTCAAGGCTACACTTACAATGACCTAACA
GGTCAGATTGGCTTTCAGGAGAATCTACATGACACAGAGTCTTTCCTGTCCATGGAGTAG
Transcript >Agabi119p4|007420
ATGCCCAAGGCATCTCAGGGGTCAATCCAACGTTCTGCTTCCTCATCAGATCCCCTCGCAAATCCTACCCATCCG
AATGTACTTAAGCGAAATCAGGCTTGTCACCAGTGTCGCAGAAGGAAACTAAAATGCGATGCCAAAAGACCGTGT
TCTACCTGCGTTCGCTCGCATGCTCATCAGCTAAACCATGCCCCCCCTGGTGCCAACATAGCAGCTAAACCAGAA
TGCACTTTTGACGAAGTTGCTGAAACCAATATCATGCCGTCAGAAGGTCCAAAAAGCAAATATGAGCGGCTTGAA
AACCGCATCAACGAACTGGAAACACTTCTCAGACAGAAAGAAAACAAGGACCAGGCGACCCTGAATGTTACACCT
TCAGATGACATTCAGAGTATTCAGTCTTCGGGTTCCCTGGTTGCTACCGGTGGTGTGTCCCAGAAGCAACTCAAC
ACATATCCATCGAATGGATCGCCGTCCACACGTAGCTTAACGCGTTCCCCACCCCATGAAACGTTCACTTCTGTT
CAGTCGTCCGATAATAGTCTTTCAACTGCATCCATTGCTTATGGGCTAGATGTGATGTGGCCTAACTGGCCTTCG
AATCTTCCTGGTCCAGAACTGCTGCGCCATTTGGTTGACGTCTTCTTCACCTTCCATCCCCATGCGAATCGCCTC
TTCCATGCTTCCACTTTCATCAGCTCGCTTTCTTATGGTCCTAGTCACCCCAAATTTCCTTGTACTGCGGTACTT
CACGCGATATGTGCTGTTGGAAGTCTATATACAGCCGCAGTCACGTCGCCTCCGCTTCCAGACTTCGACAAGATA
GCTCCAGATGAAATTTTTCTGGAGAAACACCGACTAAAGGAACCAAGATTAGATTCCTTCGCAGAGCAGCAGGCG
AAGTATGCTCGCGAAACTGGGGAGAGATTGAATACTTTGGGTGAAAACCTATTTCAAGTTTTCCAGTCTACCATT
GTTTTGACCTGGTTCTATTGGTCACACGGCAGATGGGTTGACGTGTTCATGACGTCTGCTTATTGTGTCAGGTTG
TCCATTCCACTGGGCCTCAACATGTGCCCACCATTTCATTCTATTGCCAAATCAGACAGACCACCCTCAATCATA
GCACCAGCACGGACAGTGATAGAAGATGAAACGAGGCGCAATGCTTTCTGGCTAGCGTATGCGATGGAACGTCAG
CATGGGATGGGAAATGGATGGGCTTTATGCCTTGACGACCAAGATATCTCACAACTCCTACCTGTTCGTGGAGAC
CAGTTCGAGCAAGGAACGCTAGTGACACCGTTGGAAAGACAATGGGCTCACGCTGGGGATCTACTGCTTACCCAT
CCTGAAAGCCAGATTGATTCTTTTATCTTGTATATCAAAGGGACTATCCTAATCGCTCGGGTTAAGGTCTTCAAT
ACACGTTTTAGAGCTCGGCATTATGCTGGTGATACGGCTGTCACCAATATCCGAGGTGACAACATTTCAGAACGC
TACGATCCTAGGGGATCCTCAGCTTTTATTGAGCTGGATCACGTCGCTTCGTCATTCAGGTCGTCGTTCCCCAGT
CATCTCCGCAATCCAATCAGCAATAATGTCGTGGACAATCATTTGTACACCGCCTCTTTGATGCCTCACGTAGCT
ACTATCGTACTCCATGATCCCCATGCCGAGGTTCGGCAGTCGGGATGCATATCTGCTCTCAAGATATTGACGGCC
GCAAGAGCCATACTAGACATGATATATAACGTGTGGTCTACGAGTTATGATATCACACTCCTGGACTCGTTTTGC
TCCCTTGCCTGGTTTACTGCGGGTCGCGTGTTAGTCAGGTTCCTCCAGGCCGCCATTGACGCGGAAGGGCAAGAT
CAAATCGCGACTCTGCGAGCCGAGCTCGAATTTGTGCATTCTGCCATCGTCAAGCTCGGACAGCGCATACCGCTC
GCATATCGTTTCTCAAAGATGTTAGAGGACCTTGTTACGAAACGTTGTGGAGAGAGCTATAGCTCTAGTTTACGA
GCTGTTTTCTCCCGTTCAGCGGAGCCTGCTTCGTTACAGTCTCTTCCTCAAGGCTACACTTACAATGACCTAACA
GGTCAGATTGGCTTTCAGGAGAATCTACATGACACAGAGTCTTTCCTGTCCATGGAGTAG
Gene >Agabi119p4|007420
ATGCCCAAGGCATCTCAGGGGTCAATCCAACGTTCTGCTTCCTCATCAGATCCCCTCGCAAATCCTACCCATCCG
AATGTACTTAAGCGAAATCAGGTTTGTGTTTTGCTTTGACTTCCTCTAACTTTGGACTGTAAATTCTGACTCCAT
ACAGGCTTGTCACCAGGTATGTAACCCTTTGAAATGTTACTTGTCTTCAGTAATAGCCAAACATGATGTTTCGCA
GTGTCGCAGAAGGAAACTAGTATGTCTTATCTGCTCTCTTCGTGTACCTCACATTCTGACTTGCCCATGAGAAAT
GGTATGCTCGTATTCGACTTCCTGGGATCCAGCTGTGTCCTCATTCTACTCAAGCGATGCCAAAAGACCGTGTTC
TACCTGCGTTCGCTCGCATGCTCATCAGCTAAACCATGCCCCCCCTGGTGCCAACATAGCAGCTAAACCAGAATG
CACTTTTGACGAAGGTTGGCGTTTGTCTTAGCAGAATTCACCCTGATGTCACTCAGTGTCCTACCAGTTGCTGAA
ACCAATATCATGCCGTCAGAAGGTCCAAAAAGCAAATATGAGCGGCTTGAAAACCGCATCAGTATGTGTGTCTAT
GTTGCACGTTGGTATAATGTGAAAACACGTTCCACTCCCTTGACAGACGAACTGGAAACACTTCTCAGACAGAAA
GAAAACAAGGACCAGGCGACCCTGAATGTTACACCTTCAGATGACATTCAGAGTATTCAGTCTTCGGGTTCCCTG
GTTGCTACCGGTGGTGTGTCCCAGAAGCAACTCAACACATATCCATCGAATGGATCGCCGTCCACACGTAGCTTA
ACGCGTTCCCCACCCCATGAAACGTTCACTTCTGTTCAGTCGTCCGATAATAGTCTTTCAACTGCATCCATTGCT
TATGGGCTAGATGTGATGTGGCCTAACTGGCCTTCGAATCTTCCTGGTCCAGAACTGCTGCGCCATTTGTGAGTC
GGCTGCACCCAATTTTCAGTTCGATGAGAATTTATAGAAGTATAGGGTTGACGTCTTCTTCACCTTCCATCCCCA
TGCGAATCGCCTCTTCCATGCTTCCACTTTCATCAGCTCGCTTTCTTATGGTCCTAGTCACCCCAAATTTCCTTG
TACTGCGGTACTTCACGCGATATGTGCTGTTGGAAGTCTATATACAGCCGCAGTCACGTCGCCTCCGCTTCCAGA
CTTCGACAAGATAGCTCCAGGTCAGATTTCACTGCCAACTTAACATCAGTATATGCTATAACCACCATAGATGAA
ATTTTTCTGGAGAAACACCGACTAAAGGAACCAAGATTAGATTCCTTCGCAGAGCAGCAGGCGAAGTATGCTCGC
GAAACTGGGGAGAGATTGAATACTTTGGGTGAAAACCTATTTCAAGTTTTCCAGTGTCAGTGGCTATTCTTCACA
CCTCCAACTATTCCAGTTCACATATAGTTTTAGCTACCATTGTTTTGACCTGGTTCTATTGGTCACACGGCAGGT
ATATATACAATTTTCATCGCTTCTCCCCGAGTTTACCTTGTTTCATTTGGGCTTGTAGATGGGTTGACGTGAGTT
TGGCATCAGCGACGTTTAAATATCCTTTGTTAAAACCATTTGCAGGTGTTCATGACGTCTGCTTATTGTGTCAGG
TTGTCCATTCCACTGGGCCTCAACATGTGCCCACCATTTCATTCTATTGCCAAATCAGACAGACCACCCTCAATC
ATAGCACCAGCACGGACAGTGATAGAAGATGAAACGAGGCGCAATGCTTTCTGGCTAGCGTATGCGATGGAACGT
CAGCATGGGATGGGAAATGGATGGGCTTTATGCCTTGACGACCAAGATATCTCACAACTCCTACCTGTTCGTGGA
GACCAGTTCGAGCAAGGAGTTGAGCATTTCCTTCTAGACTCTCCATTTGCAACTGACATCCCTACCAGACGCTAG
TGACACCGTTGGAAAGACAATGGGCTCACGCTGGGGATCTACTGCTTACCCATCCTGAAAGCCAGATTGATTCTT
TTATCTTGTATATCAAAGGGACTATCCTAATCGGTAAGATACATCTTATTGAGTTCATCATAACTCCTTCTCATC
TTCAATCTAGCTCGGGTTAAGGTCTTCAATACACGTTTTAGAGCTCGGCATTATGCTGGTGATACGGCTGTCACC
AATATCCGAGGTGACAACATTTCAGAACGCTACGATCCTAGGGGATCCTCAGCTTTTATTGAGCTGGATCACGTC
GCTTCGTCATTCAGGTCGTCGTTCCCCAGTCATCTCCGCAATCCAATCAGCAATAATGTCGTGGACAATCATTTG
TACACCGCCTCTTTGATGCCTCACGTGTAGGTCACTTTTATCGACCCGCGTTCCTGCTGAACTTTGCTTTCAAGA
GCTACTATCGTACTCCATGATCCCCATGCCGAGGTTCGGCAGTCGGGATGCATATCTGCTCTCAAGATATTGACG
GCCGCAAGAGCCATACTAGACATGATATATAACGTGTGGTCTACGAGTTATGATATCACACTCCTGGACTCGTTT
TGCTCCGTAAGCCAGTACAAACGTACGAACTAAGCGCACTCATCCACATCGTTTCGAAGCTTGCCTGGTTTACTG
CGGGTCGCGTGTTAGTCAGGTTCCTCCAGGCCGCCATTGACGCGGAAGGGCAAGATCAAATCGCGACTCTGCGAG
CCGAGCTCGAATTTGTGCAGTAAGTGTTGTATATCTATTGAGGGCTTTTGTCAGCGCTTCATGCATCTCCGTAGT
TCTGCCATCGTCAAGCTCGGACAGCGCATACCGCTCGCATATCGTTTCTCAAAGATGTTAGAGGACCTTGTTACG
AAACGTTGTGGAGAGAGCTATAGCTCTAGTTTACGAGCTGTTTTCTCCCGTTCAGCGGAGCCTGCTTCGTTACAG
TCTCTTCCTCAAGGCTACACTTACAATGACCTAACAGGTCAGATTGGCTTTCAGGAGAATCTACATGACACAGAG
TCTTTCCTGTCCATGGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail