Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|007390
Gene name
Locationscaffold_01a:1740596..1743421
Strand-
Gene length (bp)2825
Transcript length (bp)2142
Coding sequence length (bp)2142
Protein length (aa) 714

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 2.1E-06 202 375
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 9.1E-06 17 41

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q1MTM9|YFN1_SCHPO Uncharacterized transcriptional regulatory protein C1327.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1327.01c PE=1 SV=2 201 490 3.0E-07

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0065007 biological regulation No
GO:0019222 regulation of metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0005488 binding No
GO:0009889 regulation of biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0044238 primary metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0046872 metal ion binding No
GO:0006725 cellular aromatic compound metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0090304 nucleic acid metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003676 nucleic acid binding No
GO:0031323 regulation of cellular metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003674 molecular_function No
GO:0018130 heterocycle biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0010468 regulation of gene expression No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0050789 regulation of biological process No
GO:0043170 macromolecule metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0044237 cellular metabolic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0019438 aromatic compound biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0050794 regulation of cellular process No
GO:0016070 RNA metabolic process No
GO:0009987 cellular process No
GO:0051252 regulation of RNA metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0009058 biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043169 cation binding No
GO:1903506 regulation of nucleic acid-templated transcription No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|007390
MPKVATTSSRPTLRRNQACRSCRKRKLKCDAARPHCGTCVKQWQALVGVPAPIGYAHPTEPQCSYDPVEGLSLAP
DTDPIEKIRQLEDEVARLKNQLFEKEQALSRSITPNQHHAHLPTTSPTSQTSSLTRPTSSTSGVSLPQASITMMN
LIESDSPQHAGRNDSSSPELATATKSTTDPFMDLLFSGWNPDLPDPNTLNHYVDVFFRCDPCGSRVLHRPSFLAS
MRLSPRDPGFPHSAILHGICAAASRWSPQNIVTMPDGTRRDQFAEFHASKTRQYIDKTMASGEDIFSVMQACILL
SWYFYQEGRWVEVWIFAAFQTRVAIPLRLNYPGTFSTHGNNSPGAYLAPPKDLRDLESRRRTWWMTIIFDRIASV
GGWIHAVDERDLGTELPLRTVDFESELAVPSNPQDLSTPDVFIRHPPQYTDSFLLFIKAVMLFGRVTDYNVRGNL
RAPTAPSRNQNPFFLEGFNALDKLVCHDFLDNLPQAYKHTTGLADASEESNLDTDLYMVHIIPHAAAITLHNPYI
DFTDPNNVSTARCIMAARAILSAYYTLTATSLDITRLHPFVTICWYLAAVVQVQLCKYFIEINDSERESTVWGEI
NVLRFVMMEYGQRSPVGTRQERLLQGLMREIVRLTGQKQPLQVGVPLYPFSHQTLFEKDEMNQQSSNDVSSVHPL
LLPNTVASIWPAGDMAALDNSSTLGVESDMRSTSNFPK*
Coding >Agabi119p4|007390
ATGCCGAAAGTAGCCACGACTTCCTCGAGACCTACACTCAGGCGGAACCAGGCGTGCCGGTCTTGTCGTAAACGG
AAGCTCAAATGCGACGCAGCTCGCCCACATTGTGGCACATGTGTGAAACAATGGCAAGCATTGGTTGGCGTGCCA
GCACCCATCGGATACGCTCATCCAACAGAGCCACAGTGCTCTTATGATCCAGTGGAGGGACTGTCGCTTGCTCCA
GACACAGACCCAATAGAAAAGATACGTCAATTGGAAGACGAAGTTGCTCGCCTCAAGAATCAACTCTTTGAAAAG
GAGCAGGCGTTATCACGGTCTATAACACCAAACCAGCATCATGCACACCTCCCAACAACCTCGCCCACGTCTCAA
ACTTCTTCACTCACCCGACCTACTTCTAGTACCAGCGGAGTCAGCCTCCCCCAAGCGTCAATCACTATGATGAAC
TTAATAGAATCGGACAGTCCACAGCACGCGGGTCGCAACGACAGTAGCAGTCCAGAGCTGGCAACTGCTACAAAG
TCCACGACTGATCCATTCATGGACCTGCTGTTTTCGGGATGGAACCCAGACTTGCCTGATCCCAACACATTGAAC
CACTATGTTGATGTCTTCTTTCGATGTGACCCTTGTGGATCGAGAGTGCTTCATCGGCCATCATTTCTGGCGTCA
ATGCGCCTGTCACCGAGGGACCCGGGATTCCCTCATTCCGCTATTTTGCATGGAATCTGCGCGGCGGCATCGCGT
TGGTCTCCGCAGAATATTGTCACGATGCCTGATGGTACTCGCCGCGACCAGTTCGCCGAGTTTCATGCCAGTAAA
ACTCGGCAATATATCGATAAGACAATGGCTAGTGGGGAAGACATTTTCTCTGTTATGCAGGCTTGTATTTTGCTG
TCATGGTATTTCTATCAAGAGGGTCGCTGGGTGGAAGTCTGGATCTTTGCGGCGTTTCAGACTCGTGTTGCTATA
CCTCTTCGTCTCAATTATCCCGGAACTTTCTCAACCCATGGTAACAACTCCCCGGGTGCCTATCTAGCGCCACCA
AAGGATCTGCGAGACTTGGAGTCGAGGCGGCGGACTTGGTGGATGACCATTATCTTTGATCGCATCGCTTCCGTT
GGCGGCTGGATACATGCAGTCGATGAACGGGATCTGGGAACAGAGCTTCCTTTGAGGACCGTGGATTTCGAGTCA
GAGCTTGCTGTCCCAAGCAATCCTCAAGACCTTTCCACTCCAGATGTTTTCATCCGTCATCCACCGCAGTACACA
GACTCTTTCCTTCTGTTCATTAAGGCGGTTATGCTGTTCGGAAGGGTGACGGATTACAATGTCCGCGGTAATTTG
CGTGCACCAACTGCACCTAGCAGGAATCAGAATCCATTTTTTCTAGAAGGGTTCAATGCCTTGGACAAATTGGTT
TGTCATGATTTCTTGGACAACTTACCTCAGGCGTATAAACATACCACTGGACTGGCCGACGCGTCCGAGGAGAGC
AATCTTGATACAGATTTATATATGGTTCATATCATCCCCCACGCAGCTGCAATTACACTTCATAATCCGTATATC
GATTTCACAGATCCTAATAACGTGTCCACTGCCAGGTGTATTATGGCGGCAAGAGCTATTTTAAGCGCATATTAT
ACGCTGACTGCGACATCCCTTGACATCACAAGGTTGCATCCCTTTGTGACGATTTGCTGGTACCTTGCTGCAGTG
GTGCAGGTTCAATTATGTAAATATTTCATTGAAATCAACGACAGTGAGCGAGAATCGACAGTCTGGGGAGAGATT
AATGTGCTCAGGTTTGTAATGATGGAGTATGGTCAGCGGTCCCCGGTTGGAACGCGACAAGAGCGACTACTGCAG
GGTCTTATGCGAGAGATAGTCCGTCTGACGGGACAGAAGCAGCCTTTGCAGGTCGGCGTACCACTATATCCCTTT
TCTCACCAAACCCTTTTCGAAAAAGATGAAATGAATCAGCAGTCTTCAAACGATGTGTCCAGTGTGCACCCACTA
TTATTGCCCAACACGGTTGCTTCTATCTGGCCGGCAGGAGACATGGCAGCACTAGATAATTCGTCGACACTTGGT
GTCGAATCGGACATGCGGTCTACCTCAAACTTTCCCAAGTAA
Transcript >Agabi119p4|007390
ATGCCGAAAGTAGCCACGACTTCCTCGAGACCTACACTCAGGCGGAACCAGGCGTGCCGGTCTTGTCGTAAACGG
AAGCTCAAATGCGACGCAGCTCGCCCACATTGTGGCACATGTGTGAAACAATGGCAAGCATTGGTTGGCGTGCCA
GCACCCATCGGATACGCTCATCCAACAGAGCCACAGTGCTCTTATGATCCAGTGGAGGGACTGTCGCTTGCTCCA
GACACAGACCCAATAGAAAAGATACGTCAATTGGAAGACGAAGTTGCTCGCCTCAAGAATCAACTCTTTGAAAAG
GAGCAGGCGTTATCACGGTCTATAACACCAAACCAGCATCATGCACACCTCCCAACAACCTCGCCCACGTCTCAA
ACTTCTTCACTCACCCGACCTACTTCTAGTACCAGCGGAGTCAGCCTCCCCCAAGCGTCAATCACTATGATGAAC
TTAATAGAATCGGACAGTCCACAGCACGCGGGTCGCAACGACAGTAGCAGTCCAGAGCTGGCAACTGCTACAAAG
TCCACGACTGATCCATTCATGGACCTGCTGTTTTCGGGATGGAACCCAGACTTGCCTGATCCCAACACATTGAAC
CACTATGTTGATGTCTTCTTTCGATGTGACCCTTGTGGATCGAGAGTGCTTCATCGGCCATCATTTCTGGCGTCA
ATGCGCCTGTCACCGAGGGACCCGGGATTCCCTCATTCCGCTATTTTGCATGGAATCTGCGCGGCGGCATCGCGT
TGGTCTCCGCAGAATATTGTCACGATGCCTGATGGTACTCGCCGCGACCAGTTCGCCGAGTTTCATGCCAGTAAA
ACTCGGCAATATATCGATAAGACAATGGCTAGTGGGGAAGACATTTTCTCTGTTATGCAGGCTTGTATTTTGCTG
TCATGGTATTTCTATCAAGAGGGTCGCTGGGTGGAAGTCTGGATCTTTGCGGCGTTTCAGACTCGTGTTGCTATA
CCTCTTCGTCTCAATTATCCCGGAACTTTCTCAACCCATGGTAACAACTCCCCGGGTGCCTATCTAGCGCCACCA
AAGGATCTGCGAGACTTGGAGTCGAGGCGGCGGACTTGGTGGATGACCATTATCTTTGATCGCATCGCTTCCGTT
GGCGGCTGGATACATGCAGTCGATGAACGGGATCTGGGAACAGAGCTTCCTTTGAGGACCGTGGATTTCGAGTCA
GAGCTTGCTGTCCCAAGCAATCCTCAAGACCTTTCCACTCCAGATGTTTTCATCCGTCATCCACCGCAGTACACA
GACTCTTTCCTTCTGTTCATTAAGGCGGTTATGCTGTTCGGAAGGGTGACGGATTACAATGTCCGCGGTAATTTG
CGTGCACCAACTGCACCTAGCAGGAATCAGAATCCATTTTTTCTAGAAGGGTTCAATGCCTTGGACAAATTGGTT
TGTCATGATTTCTTGGACAACTTACCTCAGGCGTATAAACATACCACTGGACTGGCCGACGCGTCCGAGGAGAGC
AATCTTGATACAGATTTATATATGGTTCATATCATCCCCCACGCAGCTGCAATTACACTTCATAATCCGTATATC
GATTTCACAGATCCTAATAACGTGTCCACTGCCAGGTGTATTATGGCGGCAAGAGCTATTTTAAGCGCATATTAT
ACGCTGACTGCGACATCCCTTGACATCACAAGGTTGCATCCCTTTGTGACGATTTGCTGGTACCTTGCTGCAGTG
GTGCAGGTTCAATTATGTAAATATTTCATTGAAATCAACGACAGTGAGCGAGAATCGACAGTCTGGGGAGAGATT
AATGTGCTCAGGTTTGTAATGATGGAGTATGGTCAGCGGTCCCCGGTTGGAACGCGACAAGAGCGACTACTGCAG
GGTCTTATGCGAGAGATAGTCCGTCTGACGGGACAGAAGCAGCCTTTGCAGGTCGGCGTACCACTATATCCCTTT
TCTCACCAAACCCTTTTCGAAAAAGATGAAATGAATCAGCAGTCTTCAAACGATGTGTCCAGTGTGCACCCACTA
TTATTGCCCAACACGGTTGCTTCTATCTGGCCGGCAGGAGACATGGCAGCACTAGATAATTCGTCGACACTTGGT
GTCGAATCGGACATGCGGTCTACCTCAAACTTTCCCAAGTAA
Gene >Agabi119p4|007390
ATGCCGAAAGTAGCCACGACTTCCTCGAGACCTACACTCAGGCGGAACCAGGTGAGCTATGCAGTATAAACTTTG
TGAATGATACCTGAGCACTCCTTCACTCAGGCGTGCCGGTCTTGTCGTAAACGGAAGCTCGTACGTTATTTATGA
GTTATTTGCAATCAGTGGTCGTGAAATAAGGTATTGTGGTAGAAATGCGACGCAGCTCGCCCACATTGTGGCACA
TGTGTGAAGTGAGTTCATGCACACGATCTATATTGCAATGACGCTGAATCAGACGCCGTAGACAATGGCAAGCAT
TGGTTGGCGTGCCAGCACCCATCGGATACGCGTAGGTATGACTTTAATCTTGGAAAATTGATTCCTGAGCTACCG
TCCTAGTCATCCAACAGAGCCACAGTGCTCTTATGATCCAGTGGAGGGACTGTCGCTTGCTCCAGACACAGACCC
AATAGAAAAGATACGTCAATTGGAAGACGAAGTTGGTGAGTGGCTTCCCGACATGCATTTTTAAGCACCTATTTA
TAATCTGTAGCTCGCCTCAAGAATCAACTCTTTGAAAAGGAGCAGGCGTTATCACGGTCTATAACACCAAACCAG
CATCATGCACACCTCCCAACAACCTCGCCCACGTCTCAAACTTCTTCACTCACCCGACCTACTTCTAGTACCAGC
GGAGTCAGCCTCCCCCAAGCGTCAATCACTATGATGAACTTAATAGAATCGGACAGTCCACAGCACGCGGGTCGC
AACGACAGTAGCAGTCCAGAGCTGGCAACTGCTACAAAGTCCACGACTGATCCATTCATGGACCTGCTGTTTTCG
GGATGGAACCCAGACTTGCCTGATCCCAACACATTGAACCACTAGTGAGCTCGCTACTTTCCGTTTAGCAAATGT
TTCACTGAATTGTGTGCAGTGTTGATGTCTTCTTTCGATGTGACCCTTGTGGATCGAGAGTGCTTCATCGGCCAT
CATTTCTGGCGTCAATGCGCCTGTCACCGAGGGACCCGGGATTCCCTCATTCCGCTATTTTGCATGGAATCGTAG
GATCCTATTCTCGTTTATAGTTATGATTACTGACATATACTAGTGCGCGGCGGCATCGCGTTGGTCTCCGCAGAA
TATTGTCACGATGCCTGATGGTACTCGCCGCGACCAGTTCGCCGAGTTTCATGCCAGTAAAACTCGGCAATATAT
CGATAAGACAATGGCTAGTGGGGAAGACATTTTCTCTGTTATGCAGGCTTGTATTTTGCTGTCATGGTATTTCTA
TCAAGAGGGTCGCTGGGTGGAAGTCTGGATCTTTGCGGCGTTTCAGACTCGTGTTGCTATACCTCTTCGTCTCAA
TTATCCCGGAACTTTCTCAACCCATGGTAACAACTCCCCGGGTGCCTATCTAGCGCCACCAAAGGATCTGCGAGA
CTTGGAGTCGAGGCGGCGGACTTGGTGGATGACCATTATCTTTGATCGCATCGCTTCCGTTGGCGGCTGGATACA
TGCAGTCGATGAACGGGATCTGGGAACAGAGCTTCCTTTGAGGACCGTGGATTTCGAGTCAGAGGTGAGAGTCTT
ATTTTAATACCAACCTATCTCCATTATTCTCAGCTGTGCCATATGATCTCAGCTTGCTGTCCCAAGCAATCCTCA
AGACCTTTCCACTCCAGATGTTTTCATCCGTCATCCACCGCAGTACACAGACTCTTTCCTTCTGTTCATTAAGGC
GGTTATGCTGTTCGGAAGGGTGACGGATTACAATGTCCGCGGTAATTTGCGTGCACCAACTGCACCTAGCAGGAA
TCAGAATCCATTTTTTCTAGAAGGGTTCAATGCCTTGGACAAATTGGTTTGTCATGATTTCTTGGACAACTTACC
TCAGGCGTATAAACATACCACTGGACTGGCCGACGCGTCCGAGGAGAGCAATCTTGATACAGATTTATATATGGT
TCATATCATCCCCCACGCGTACGGTTCCTATTATTATTGGCGAATCCCGTGTTGACCTAGAATTTTCCAGAGCTG
CAATTACACTTCATAATCCGTATATCGATTTCACAGATCCTAATAACGTGTCCACTGCCAGGTGTATTATGGCGG
CAAGAGCTATTTTAAGCGCATATTATACGCTGACTGCGACATCCCTTGACATCACAAGGTTGCATCCCTTTGTGA
CGGTTTGCTTTTTCCCGCCTTCGCCAGGAAGAATGTGGTTGACGCGGTTTCTTAGATTTGCTGGTACCTTGCTGC
AGTGGTGCAGGTTCAATTATGTAAATATTTCATTGAAATCAACGACAGTGAGCGAGAATCGACAGTCTGGGGAGA
GATTAATGTGCTCAGGTTTGTATGGGTTTCGGAGAAGTTTGAGATGACTGACATTGTGTCTGCCAGGTTTGTAAT
GATGGAGTATGGTCAGCGGTCCCCGGTTGGAAGTGTGTATTCAGATTTCATGTCTGTTTAGGGAGCTGATGATGG
CTCGATAGCGCGACAAGAGCGACTACTGCAGGGTCTTATGCGAGAGATAGTCCGTCTGACGGGACAGAAGCAGCC
TTTGCAGGTCGGCGTACCACTATATCCCTTTTCTCACCAAACCCTTTTCGAAAAAGATGAAATGAATCAGCAGTC
TTCAAACGATGTGTCCAGTGTGCACCCACTATTATTGCCCGTAAGTCTGCCGTCTGAAACACACAATCAACCTTA
CATCTCATTGGGAGCAGAACACGGTTGCTTCTATCTGGCCGGCAGGAGACATGGCAGCACTAGATAATTCGTCGA
CACTTGGTGTCGAATCGGACATGCGGTCTACCTCAAACTTTCCCAAGTAA

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