© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Agabi119p4|007060 |
| Gene name | |
| Location | scaffold_01a:1682262..1683318 |
| Strand | + |
| Gene length (bp) | 1056 |
| Transcript length (bp) | 903 |
| Coding sequence length (bp) | 903 |
| Protein length (aa) | 301 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 4.2E-08 | 67 | 208 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 7.0E-07 | 87 | 203 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 6.3E-07 | 86 | 201 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.3E-06 | 87 | 205 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 1.7E-06 | 83 | 218 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A4F7P5|ERYG_SACEN | Erythromycin 3''-O-methyltransferase OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) GN=eryG PE=1 SV=1 | 42 | 258 | 2.0E-15 |
| sp|Q8KZ94|REBMT_NOCAE | Demethylrebeccamycin-D-glucose O-methyltransferase OS=Lechevalieria aerocolonigenes GN=rebM PE=1 SV=1 | 50 | 210 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 27 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|007060 MFDTLSLFLFLSITLCSLFFLRSSVGVPYGLYHLTLNKELGDSDSSPKTEWMNQGYWKATTSFPEACRALALKLL KAAKYKVGDSVLDVGHGTGESLIMFLTDRDIPRPSKLVGITNAPSQYQRSKERVSRVRSSNDEAAKVSVDLYCGD AICRDAAPPTHPLHVQNTARFDVVFALDCAYHFATRKEFLAQAYQKLAPGGRIVLGDICFAKEFPSRVIAFIATK IMPKENIVSPQEYIQLLEKLEYTEVELEDITSDSFVGLCKFLSTRGALWYIYSCFLSWFQDAGGARFVVVTARKP * |
| Coding | >Agabi119p4|007060 ATGTTTGATACTCTCAGTCTTTTCCTCTTCCTTTCCATTACTCTCTGTTCCCTCTTCTTCCTTCGTTCTTCAGTG GGAGTTCCATATGGATTATATCATTTGACCTTGAACAAGGAGCTAGGAGACTCAGACTCTTCGCCAAAGACAGAA TGGATGAACCAGGGTTATTGGAAGGCGACAACGTCATTTCCGGAGGCTTGTCGCGCTCTTGCCCTCAAGCTCTTG AAGGCTGCAAAATACAAAGTGGGAGACAGTGTTCTCGATGTTGGACATGGCACCGGGGAGTCTCTTATCATGTTC CTGACGGACCGTGACATTCCTCGTCCTTCCAAGTTGGTCGGTATCACGAATGCTCCTTCCCAATACCAACGTTCA AAAGAACGTGTATCTCGTGTTCGTTCTTCCAACGACGAAGCAGCCAAGGTTTCAGTTGATTTGTACTGCGGTGAT GCCATTTGCCGCGACGCTGCCCCACCGACACACCCTCTCCACGTTCAGAACACAGCAAGATTCGACGTTGTCTTT GCTTTGGATTGTGCTTACCATTTTGCCACACGTAAAGAATTCCTGGCTCAAGCGTATCAGAAATTAGCGCCAGGA GGTCGAATAGTCCTCGGGGACATTTGCTTCGCAAAGGAGTTCCCATCTAGGGTCATAGCTTTCATTGCCACTAAA ATCATGCCAAAGGAAAACATAGTTTCCCCGCAGGAGTATATCCAACTTTTGGAAAAGCTTGAATATACGGAGGTT GAGTTGGAAGATATTACTTCTGATTCATTCGTCGGTCTCTGCAAGTTTTTGTCTACTCGGGGGGCACTGTGGTAC ATCTATTCGTGTTTTCTGAGTTGGTTTCAGGATGCTGGTGGAGCACGTTTCGTTGTTGTCACCGCACGAAAGCCA TGA |
| Transcript | >Agabi119p4|007060 ATGTTTGATACTCTCAGTCTTTTCCTCTTCCTTTCCATTACTCTCTGTTCCCTCTTCTTCCTTCGTTCTTCAGTG GGAGTTCCATATGGATTATATCATTTGACCTTGAACAAGGAGCTAGGAGACTCAGACTCTTCGCCAAAGACAGAA TGGATGAACCAGGGTTATTGGAAGGCGACAACGTCATTTCCGGAGGCTTGTCGCGCTCTTGCCCTCAAGCTCTTG AAGGCTGCAAAATACAAAGTGGGAGACAGTGTTCTCGATGTTGGACATGGCACCGGGGAGTCTCTTATCATGTTC CTGACGGACCGTGACATTCCTCGTCCTTCCAAGTTGGTCGGTATCACGAATGCTCCTTCCCAATACCAACGTTCA AAAGAACGTGTATCTCGTGTTCGTTCTTCCAACGACGAAGCAGCCAAGGTTTCAGTTGATTTGTACTGCGGTGAT GCCATTTGCCGCGACGCTGCCCCACCGACACACCCTCTCCACGTTCAGAACACAGCAAGATTCGACGTTGTCTTT GCTTTGGATTGTGCTTACCATTTTGCCACACGTAAAGAATTCCTGGCTCAAGCGTATCAGAAATTAGCGCCAGGA GGTCGAATAGTCCTCGGGGACATTTGCTTCGCAAAGGAGTTCCCATCTAGGGTCATAGCTTTCATTGCCACTAAA ATCATGCCAAAGGAAAACATAGTTTCCCCGCAGGAGTATATCCAACTTTTGGAAAAGCTTGAATATACGGAGGTT GAGTTGGAAGATATTACTTCTGATTCATTCGTCGGTCTCTGCAAGTTTTTGTCTACTCGGGGGGCACTGTGGTAC ATCTATTCGTGTTTTCTGAGTTGGTTTCAGGATGCTGGTGGAGCACGTTTCGTTGTTGTCACCGCACGAAAGCCA TGA |
| Gene | >Agabi119p4|007060 ATGTTTGATACTCTCAGTCTTTTCCTCTTCCTTTCCATTACTCTCTGTTCCCTCTTCTTCCTTCGTTCTTCAGTG GGAGTTCCATATGGATTATATCATTTGACCTTGAACAAGGAGCTAGGAGACTCAGACTCTTCGCCAAAGACAGAA TGGATGAACCAGGGTTATTGGAAGGTCCGATTCATTCTAGTCGACAACTTCACGTATGATTCTAAAAGTTCTTAG GCGACAACGTCATTTCCGGAGGCTTGTCGCGGTATTGGACCTTCCGCCGGATCATATTCTCGTTAATGATACTCC GCTGTAGCTCTTGCCCTCAAGCTCTTGAAGGCTGCAAAATACAAAGTGGGAGACAGTGTTCTCGGTATGTGTTTC TCTTCCTACCGATGAAGCACCATCATCGATCGTTACCTAGATGTTGGACATGGCACCGGGGAGTCTCTTATCATG TTCCTGACGGACCGTGACATTCCTCGTCCTTCCAAGTTGGTCGGTATCACGAATGCTCCTTCCCAATACCAACGT TCAAAAGAACGTGTATCTCGTGTTCGTTCTTCCAACGACGAAGCAGCCAAGGTTTCAGTTGATTTGTACTGCGGT GATGCCATTTGCCGCGACGCTGCCCCACCGACACACCCTCTCCACGTTCAGAACACAGCAAGATTCGACGTTGTC TTTGCTTTGGATTGTGCTTACCATTTTGCCACACGTAAAGAATTCCTGGCTCAAGCGTATCAGAAATTAGCGCCA GGAGGTCGAATAGTCCTCGGGGACATTTGCTTCGCAAAGGAGTTCCCATCTAGGGTCATAGCTTTCATTGCCACT AAAATCATGCCAAAGGAAAACATAGTTTCCCCGCAGGAGTATATCCAACTTTTGGAAAAGCTTGAATATACGGAG GTTGAGTTGGAAGATATTACTTCTGATTCATTCGTCGGTCTCTGCAAGTTTTTGTCTACTCGGGGGGCACTGTGG TACATCTATTCGTGTTTTCTGAGTTGGTTTCAGGATGCTGGTGGAGCACGTTTCGTTGTTGTCACCGCACGAAAG CCATGA |