Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|006910
Gene name
Location	scaffold_01a:1658322..1659526
Strand	+
Gene length (bp)	1204
Transcript length (bp)	828
Coding sequence length (bp)	828
Protein length (aa)	276

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00300	His_Phos_1	Histidine phosphatase superfamily (branch 1)	6.4E-22	6	202

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53929\|YNK8_YEAST	Uncharacterized protein YNL108C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL108C PE=1 SV=1	1	247	5.0E-37
sp\|Q12415\|TFC7_YEAST	Transcription factor tau 55 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFC7 PE=1 SV=1	1	247	6.0E-36

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|006910 MPLEKIYIARHGFRLSWFTNVWQSPTGLARDPPLAAYGEFQAKELAHYFSSLPEDEKPTAIFSSPYYRCLQTALP VAQTLGLPLLVEHGLSEFYCPTIPGTGLHPRPSSATSLKSFIAEIDPEWSSLWYPSQKGETVSEVHDRTDAFLQV FIPQIEHTYAGKHTNILLVGHAATVIALTRSLMGDRELPLRVGCCSLTELVPKVQDSTCATQEVLGAWEAKKLAD GKHLEDGAMRDWGFEDLEIEAGKVIEEPGVPGTETHIEGPSGAQTAHSML*
Coding	>Agabi119p4\|006910 ATGCCGCTTGAGAAAATATATATCGCTCGTCACGGCTTCCGACTCAGTTGGTTCACCAATGTCTGGCAAAGCCCT ACTGGACTTGCGCGCGATCCACCCCTAGCAGCATACGGTGAATTTCAGGCTAAAGAACTCGCGCACTATTTTTCA AGTTTACCCGAGGATGAAAAGCCCACTGCCATCTTTTCTTCACCTTATTATCGATGTTTACAAACGGCTCTACCG GTGGCACAAACCCTAGGTCTCCCTTTACTTGTCGAACACGGTTTATCCGAATTCTATTGCCCCACTATACCAGGA ACAGGTCTCCATCCCCGTCCCAGTTCAGCCACCTCCCTCAAATCCTTCATCGCAGAGATCGATCCAGAATGGTCA TCCCTCTGGTACCCCTCTCAAAAGGGCGAAACCGTCTCGGAGGTCCATGACCGGACCGACGCCTTCCTCCAGGTG TTCATACCCCAAATCGAACATACGTACGCGGGGAAGCATACGAACATCCTGTTGGTCGGCCATGCTGCTACAGTG ATCGCGCTCACGAGGTCGTTAATGGGAGATAGGGAACTTCCTTTACGAGTTGGCTGTTGCTCCTTGACTGAACTG GTGCCCAAAGTTCAGGATAGCACCTGTGCTACGCAAGAGGTACTCGGTGCTTGGGAGGCAAAGAAGCTCGCAGAT GGAAAGCATTTGGAAGATGGTGCTATGAGGGATTGGGGCTTTGAAGATCTCGAAATCGAGGCTGGAAAGGTCATC GAAGAGCCCGGAGTCCCCGGTACCGAAACCCACATAGAAGGCCCCTCAGGCGCTCAAACGGCTCATAGCATGCTG TAG
Transcript	>Agabi119p4\|006910 ATGCCGCTTGAGAAAATATATATCGCTCGTCACGGCTTCCGACTCAGTTGGTTCACCAATGTCTGGCAAAGCCCT ACTGGACTTGCGCGCGATCCACCCCTAGCAGCATACGGTGAATTTCAGGCTAAAGAACTCGCGCACTATTTTTCA AGTTTACCCGAGGATGAAAAGCCCACTGCCATCTTTTCTTCACCTTATTATCGATGTTTACAAACGGCTCTACCG GTGGCACAAACCCTAGGTCTCCCTTTACTTGTCGAACACGGTTTATCCGAATTCTATTGCCCCACTATACCAGGA ACAGGTCTCCATCCCCGTCCCAGTTCAGCCACCTCCCTCAAATCCTTCATCGCAGAGATCGATCCAGAATGGTCA TCCCTCTGGTACCCCTCTCAAAAGGGCGAAACCGTCTCGGAGGTCCATGACCGGACCGACGCCTTCCTCCAGGTG TTCATACCCCAAATCGAACATACGTACGCGGGGAAGCATACGAACATCCTGTTGGTCGGCCATGCTGCTACAGTG ATCGCGCTCACGAGGTCGTTAATGGGAGATAGGGAACTTCCTTTACGAGTTGGCTGTTGCTCCTTGACTGAACTG GTGCCCAAAGTTCAGGATAGCACCTGTGCTACGCAAGAGGTACTCGGTGCTTGGGAGGCAAAGAAGCTCGCAGAT GGAAAGCATTTGGAAGATGGTGCTATGAGGGATTGGGGCTTTGAAGATCTCGAAATCGAGGCTGGAAAGGTCATC GAAGAGCCCGGAGTCCCCGGTACCGAAACCCACATAGAAGGCCCCTCAGGCGCTCAAACGGCTCATAGCATGCTG TAG
Gene	>Agabi119p4\|006910 ATGCCGCTTGAGAAAATATATATCGCTCGTCACGGCAAGAAACTTTAGCTTCTCAAAATTTTTTATCCCACTCAC TCATCTATAGGCTTCCGACTCAGTTGGTTCACCAATGTCTGGCAAGTAGATCCCTGATCGGTACTCAGACTTGAC TCATAACACTACCCTTGAAGGAAGAGCCCTACTGGACTTGCGCGCGATCCACCCCTAGCAGCATACGGTGAAGTA ACTTATCAGATCTTTACGTTAGATCTTTTCCCTCCCTGACAAAGGGTTCTCCCTTTCGCATCAGTTTCAGGCTAA AGAACTCGCGCACTATTTTTCAAGTTTACCCGAGGATGAAAAGCCCACTGCCATCTTTTCTTCACCTTATTGTAA ATAAAGAAAAATTCTCACAAGAAAACGATCTTCTTAAAAACTTTTTTTTATAGATCGATGTTTACAAACGGCTCT ACCGGTGGCACAAACCCTAGGTCTCCCTTTACTTGTCGAACACGGTTCGTCTAGCCTTTTGATCATTTTTTTTTA AAAAACCCTGGTTTTTGATTGACACATTTACTTAACACCGTCTGGAAATATATCAAAAGGTTTATCCGAATTCTA TTGCCCCACTATACCAGGAACAGGTCTCCATCCCCGTCCCAGTTCAGCCACCTCCCTCAAATCCTTCATCGCAGA GATCGATCCAGAATGGTCATCCCTCTGGTACCCCTCTCAAAAGGGCGAAACCGTCTCGGAGGTCCATGACCGGAC CGACGCCTTCCTCCAGGTGTTCATACCCCAAATCGAACATACGTACGCGGGGAAGCATACGAACATCCTGTTGGT CGGCCATGCTGCTACAGTGATCGCGCTCACGAGGTCGTTAATGGGAGATAGGGAACTTCCTTTACGAGTTGGCTG TTGCTCCTTGACTGAACTGGTGCCCAAAGTTCAGGATAGCACCTGTGCTACGCAAGAGGTACTCGGTGCTTGGGA GGCAAAGAAGCTCGCAGATGGAAAGCATTTGGAAGATGGTGCTATGAGGGATTGGGGCTTTGAAGATCTCGAAAT CGAGGCTGGAAAGGTTGGAAACATTTTTCAAGCCTAGAATCATGGTTAGCTGACCTTGGGTTTTGGTCAGGTCAT CGAAGAGCCCGGAGTCCCCGGTACCGAAACCCACATAGAAGGCCCCTCAGGCGCTCAAACGGCTCATAGCATGCT GTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail