Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|006800
Gene name
Locationscaffold_01a:1636585..1638088
Strand-
Gene length (bp)1503
Transcript length (bp)936
Coding sequence length (bp)936
Protein length (aa) 312

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02182 SAD_SRA SAD/SRA domain 3.0E-50 129 288

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9FKA7|ORTH1_ARATH E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana GN=ORTH1 PE=1 SV=1 129 289 2.0E-34
sp|Q680I0|ORTH5_ARATH E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana GN=ORTH5 PE=2 SV=1 134 289 3.0E-34
sp|Q9C8E1|ORTH4_ARATH Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis thaliana GN=ORTH4 PE=3 SV=1 134 289 3.0E-34
sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1 113 289 3.0E-34
sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1 PE=1 SV=2 113 295 5.0E-33
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Swissprot ID Swissprot Description Start End E-value
sp|Q9FKA7|ORTH1_ARATH E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana GN=ORTH1 PE=1 SV=1 129 289 2.0E-34
sp|Q680I0|ORTH5_ARATH E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana GN=ORTH5 PE=2 SV=1 134 289 3.0E-34
sp|Q9C8E1|ORTH4_ARATH Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis thaliana GN=ORTH4 PE=3 SV=1 134 289 3.0E-34
sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1 113 289 3.0E-34
sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1 PE=1 SV=2 113 295 5.0E-33
sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2 113 295 6.0E-33
sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana GN=ORTH2 PE=1 SV=1 126 289 2.0E-32
sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1 113 284 4.0E-32
sp|B6CHA3|UHRF1_XENLA E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2 SV=1 129 292 7.0E-32
sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1 PE=3 SV=2 129 292 1.0E-31
sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1 113 284 2.0E-31
sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1 SV=1 113 292 3.0E-30
sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1 SV=1 129 292 1.0E-29
sp|Q681I0|ORTHL_ARATH E3 ubiquitin-protein ligase ORTHRUS-LIKE 1 OS=Arabidopsis thaliana GN=ORTHL PE=2 SV=1 100 289 5.0E-26
sp|Q9FVS2|ORTH3_ARATH E3 ubiquitin-protein ligase ORTHRUS 3 OS=Arabidopsis thaliana GN=ORTH3 PE=3 SV=2 134 289 8.0E-25
sp|Q8GZB6|SUVH4_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2 127 291 3.0E-19
sp|O82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=1 SV=1 127 295 1.0E-17
sp|Q8VZ17|SUVH6_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2 128 291 1.0E-16
sp|Q5QD03|SUVH3_CHLRE Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Chlamydomonas reinhardtii GN=SUVH3 PE=2 SV=1 129 297 2.0E-14
sp|Q9FF80|SUVH1_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1 114 290 2.0E-12
sp|Q9T0G7|SUVH9_ARATH Histone-lysine N-methyltransferase family member SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=1 SV=1 109 288 1.0E-10
sp|Q9C5P4|SUVH3_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2 105 290 4.0E-09
sp|Q93YF5|SUVH1_TOBAC Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1 114 289 2.0E-08
sp|Q9FHI0|YDG1_ARATH YDG domain-containing protein At5g47150 OS=Arabidopsis thaliana GN=At5g47150 PE=2 SV=1 120 291 4.0E-08
sp|O22781|SUVH2_ARATH Histone-lysine N-methyltransferase family member SUVH2 OS=Arabidopsis thaliana GN=SUVH2 PE=1 SV=1 124 291 5.0E-08
sp|Q9C5P1|SUVH7_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1 104 290 1.0E-07
sp|Q9LVU3|YDG2_ARATH YDG domain-containing protein At5g47160 OS=Arabidopsis thaliana GN=At5g47160 PE=2 SV=1 114 284 5.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|006800
MVSPYERQKELQIAKNKELLKSLGLEKPLFEPKEKPRKKATPQKRKRTDEDTENIEPSARKLQRAEDSSESGTLS
TGLRRSSRNAGKAVDYSGERTLSLPQSVIRNKTSGNDGSMGREDGKRVHNPKTYGHIPGIAVGTWWLSRQDCSQD
AVHAPWVGGISGGRQGAYSVALSGGYDDDVDLGYGFTYTGSGGRDLHGTKDKPKNLRTAPQSSDQSFEHSFNQML
KVSSETRNPVRVVRGFKLQSKYAPSEGYRYDGLYVVEKAFMEKGNNAKGYLVCRYVFKRLPDQPPLPVREDYEDL
DSIEEPSAEED*
Coding >Agabi119p4|006800
ATGGTGTCCCCCTATGAAAGGCAGAAGGAACTACAAATAGCCAAGAATAAAGAGCTATTGAAAAGTCTCGGTCTC
GAAAAACCTTTATTTGAACCGAAAGAAAAACCCAGGAAAAAAGCTACACCACAAAAGCGCAAGAGAACCGACGAA
GACACGGAAAACATAGAACCCTCAGCACGGAAACTCCAACGCGCTGAAGATTCCAGTGAGAGTGGAACCTTGTCC
ACAGGTCTTCGTCGCAGTTCTCGCAACGCTGGAAAAGCGGTCGATTACTCTGGCGAAAGAACGTTGAGTTTACCT
CAATCTGTCATACGCAACAAAACTTCGGGTAATGATGGGTCTATGGGACGCGAAGATGGAAAGCGCGTACATAAC
CCCAAAACATACGGCCACATCCCCGGTATTGCTGTTGGAACATGGTGGCTTTCAAGACAGGATTGTAGCCAAGAT
GCGGTTCATGCGCCGTGGGTAGGTGGTATATCAGGGGGTCGTCAGGGAGCGTACAGTGTCGCCCTCAGCGGAGGT
TACGATGATGACGTCGACCTTGGATATGGATTCACGTACACTGGTTCTGGTGGTCGTGATCTCCATGGGACAAAG
GATAAACCTAAAAATCTTCGTACAGCTCCACAAAGCTCTGACCAAAGTTTTGAGCACTCGTTCAACCAGATGCTG
AAGGTTTCGTCCGAAACCAGAAACCCAGTTCGTGTTGTGCGTGGTTTCAAGCTTCAATCGAAATATGCTCCAAGT
GAAGGATACCGCTACGATGGATTATATGTAGTGGAAAAGGCCTTCATGGAGAAAGGAAACAATGCGAAAGGATAT
CTTGTTTGCAGATACGTATTTAAGCGTTTACCGGACCAACCCCCTTTGCCAGTTAGAGAGGATTACGAAGACTTG
GATTCAATAGAGGAACCATCGGCGGAAGAAGATTAG
Transcript >Agabi119p4|006800
ATGGTGTCCCCCTATGAAAGGCAGAAGGAACTACAAATAGCCAAGAATAAAGAGCTATTGAAAAGTCTCGGTCTC
GAAAAACCTTTATTTGAACCGAAAGAAAAACCCAGGAAAAAAGCTACACCACAAAAGCGCAAGAGAACCGACGAA
GACACGGAAAACATAGAACCCTCAGCACGGAAACTCCAACGCGCTGAAGATTCCAGTGAGAGTGGAACCTTGTCC
ACAGGTCTTCGTCGCAGTTCTCGCAACGCTGGAAAAGCGGTCGATTACTCTGGCGAAAGAACGTTGAGTTTACCT
CAATCTGTCATACGCAACAAAACTTCGGGTAATGATGGGTCTATGGGACGCGAAGATGGAAAGCGCGTACATAAC
CCCAAAACATACGGCCACATCCCCGGTATTGCTGTTGGAACATGGTGGCTTTCAAGACAGGATTGTAGCCAAGAT
GCGGTTCATGCGCCGTGGGTAGGTGGTATATCAGGGGGTCGTCAGGGAGCGTACAGTGTCGCCCTCAGCGGAGGT
TACGATGATGACGTCGACCTTGGATATGGATTCACGTACACTGGTTCTGGTGGTCGTGATCTCCATGGGACAAAG
GATAAACCTAAAAATCTTCGTACAGCTCCACAAAGCTCTGACCAAAGTTTTGAGCACTCGTTCAACCAGATGCTG
AAGGTTTCGTCCGAAACCAGAAACCCAGTTCGTGTTGTGCGTGGTTTCAAGCTTCAATCGAAATATGCTCCAAGT
GAAGGATACCGCTACGATGGATTATATGTAGTGGAAAAGGCCTTCATGGAGAAAGGAAACAATGCGAAAGGATAT
CTTGTTTGCAGATACGTATTTAAGCGTTTACCGGACCAACCCCCTTTGCCAGTTAGAGAGGATTACGAAGACTTG
GATTCAATAGAGGAACCATCGGCGGAAGAAGATTAG
Gene >Agabi119p4|006800
ATGGTGTCCCCCTATGAAAGGCAGAAGGAACTACAAATAGCCAAGGCTTGTATTTGATTATGCCCTGAAACTTAT
AATCCTGACGAGGGCCTCAGAATAAAGAGCTATTGAAAAGTCTCGGTCTCGAAAAACCTTTATTTGAACCGAAAG
AAAAACCCAGGAAAAAAGCTACACCACAAAAGCGCAAGAGAACCGACGAAGACACGGAAAACATAGAACCCTCAG
CACGGAAACTCCAACGCGCTGAAGATTCCAGTGAGAGTGGAACCTTGTCCACAGGTCTTCGTCGCAGTTCTCGCA
ACGCTGGAAAAGCGGTCGATTACTCTGGCGAAAGAACGTTGAGTTTACCTCAATCTGTCATACGCAACAAAACTT
CGGGTAATGATGGGTCTATGGGACGCGAAGATGGAAAGCGCGTACATAACCCGTGAGTTGGAAGATTGCACCTCC
CCGGGTTGAATTCCTAATTTCACCAAACTAGCAAAACATACGGCCACATCCCCGGTATTGCTGTTGGAACATGGT
GGCTTTCAAGACAGGATTGTAGCCAAGATGCGGTTCATGCGTAAGTTATTTTATTAGACTTTAACCCATTATTCA
GCGTTGTTTTTTCGATAGGCCGTGGGTAGGTGGTATATCAGGGGGTCGTCAGGGAGCGTACAGTGTCGCCCTCAG
CGGAGGTTACGATGATGACGTCGACCTTGGATATGGATTGTAAGTCTTTTTTTCTATGGCACTGATGCATGCTAA
GTCTCGCTTTATAGCACGTACACTGGTTCTGGTAGGAAGAGCTATGTTGTTTTACGTCCATATTTGACGTGTTTC
AGGTGGTCGTGATCTCCATGGGACAAAGGATAAACCTAAAAATGTGAGAATACCTATGCCCCCTTGTTAAGCATA
CTGATTCAAACACTTCGTTAAGCTTCGTACAGCTCCACAAAGCTCTGACCAAAGTTTTGAGCACTCGGTATGCAA
CAATGTACTTTAGTGTATTTCTGCTGCTAACAAGTCATTGATCACTAGTTCAACCAGATGCTGAAGGTGATATAT
CCTCGAATGAATAACCAGATACACTGGATGCTAAACTACTTTTACAGGTTTCGTCCGAAACCAGAAACCCAGTTC
GTGTTGTGCGTGGTTTCAAGCTTCAATCGAAATATGCTCCAAGTGAAGGGTTAGTCGAACATCTTGTCTCCCGAC
CTGCAAACTGATCCCAATCCACTTAGATACCGCTACGATGGATTATATGTAGTGGAAAAGGTGGGCGACTCATTT
TATTATGACACGTCTTCTGAGAGACTTTAGGCCTTCATGGAGAAAGGAAACAATGCGAAAGGATATCTTGTTTGC
AGATACGTATTTAAGGTTTGTCTCGAAGTGCGTGCGGAAATTGCATATCTGAAGACCATATTCCAGCGTTTACCG
GACCAACCCCCTTTGCCAGTTAGAGAGGATTACGAAGACTTGGATTCAATAGAGGAACCATCGGCGGAAGAAGAT
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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