Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|006740
Gene name
Locationscaffold_01a:1626995..1627688
Strand-
Gene length (bp)693
Transcript length (bp)519
Coding sequence length (bp)519
Protein length (aa) 173

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 11 33 22
2 48 70 22
3 77 99 22
4 129 148 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|006740
MSFVKAHYHPFLFALIMLSAMAELGLTSFLIGAGNENGTWPSERYHSMLIMFEFNAIWTTLFSAAYMLWMVGGGS
QFLASVASSIIWLLITTILWGTAAGVMYYTRTGGNCALRPIIHRCRQSLTVEGLGWTEFGLCALTLILTSLWVKS
NDYRNKQETESIGAGDSTRRLV*
Coding >Agabi119p4|006740
ATGTCTTTCGTGAAGGCGCATTACCACCCCTTCTTGTTTGCTCTGATTATGTTGTCGGCCATGGCAGAATTGGGG
TTGACCTCATTTTTGATCGGAGCGGGGAACGAGAATGGAACATGGCCGAGTGAGCGGTACCATTCTATGTTGATC
ATGTTCGAATTCAATGCGATCTGGACTACACTATTTTCGGCTGCATATATGCTTTGGATGGTAGGCGGAGGAAGT
CAATTTTTGGCCAGTGTAGCAAGTTCCATCATATGGCTATTGATAACTACGATATTATGGGGAACGGCAGCTGGA
GTGATGTATTACACGCGCACGGGAGGCAATTGTGCTCTGAGACCCATTATTCATAGGTGTCGGCAATCTCTAACA
GTCGAGGGACTTGGGTGGACTGAGTTCGGACTATGCGCGTTAACTTTGATACTCACAAGCCTGTGGGTCAAATCG
AATGACTACCGAAATAAGCAGGAGACCGAATCTATAGGAGCAGGAGACTCCACGAGGAGGTTGGTCTGA
Transcript >Agabi119p4|006740
ATGTCTTTCGTGAAGGCGCATTACCACCCCTTCTTGTTTGCTCTGATTATGTTGTCGGCCATGGCAGAATTGGGG
TTGACCTCATTTTTGATCGGAGCGGGGAACGAGAATGGAACATGGCCGAGTGAGCGGTACCATTCTATGTTGATC
ATGTTCGAATTCAATGCGATCTGGACTACACTATTTTCGGCTGCATATATGCTTTGGATGGTAGGCGGAGGAAGT
CAATTTTTGGCCAGTGTAGCAAGTTCCATCATATGGCTATTGATAACTACGATATTATGGGGAACGGCAGCTGGA
GTGATGTATTACACGCGCACGGGAGGCAATTGTGCTCTGAGACCCATTATTCATAGGTGTCGGCAATCTCTAACA
GTCGAGGGACTTGGGTGGACTGAGTTCGGACTATGCGCGTTAACTTTGATACTCACAAGCCTGTGGGTCAAATCG
AATGACTACCGAAATAAGCAGGAGACCGAATCTATAGGAGCAGGAGACTCCACGAGGAGGTTGGTCTGA
Gene >Agabi119p4|006740
ATGTCTTTCGTGAAGGCGCATTACCACCCCTTCTTGTTTGCTCTGATTATGTTGTCGGCCATGGCAGAATTGGGG
TTGACCTCATTTTTGATCGGAGCGGGGAACGAGAATGGAACATGGCCGAGTGAGCGGTACCATTCTATGTGAGTC
TAGAGCTAACGATAACGAAACTTACTAAAAAAAATCGTCATTCAGGTTGATCATGTTCGAATTCAATGCGATCTG
GACTACACTATTTTCGGCTGCATATATGCTTTGGATGGTAGGCGGAGGAAGTCAATTTTTGGCCAGTGTAGCAAG
TTCCATCATATGGCTATTGATAACTACGATATTATGGGTAAGTGCTAAGACGGTAGACCCCCCAAAACGTTGATT
CACCCTTGGACTTGGGATCTATAGGGAACGGCAGCTGGAGTGATGTATTACACGCGCACGGGAGGCAATTGTGCT
CTGAGACCCATTATTCATAGGTGCGAGGTTTCAATGACGTTTAATGGACTTATTTAATTCCGATATAATATGCCA
TTTAGGTGTCGGCAATCTCTAACAGTCGAGGGACTTGGGTGGACTGAGTTCGGACTATGCGCGTTAACTTTGATA
CTCACAAGCCTGTGGGTCAAATCGAATGACTACCGAAATAAGCAGGAGACCGAATCTATAGGAGCAGGAGACTCC
ACGAGGAGGTTGGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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