© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|004740 |
| Gene name | |
| Location | scaffold_01a:1202973..1205211 |
| Strand | - |
| Gene length (bp) | 2238 |
| Transcript length (bp) | 1596 |
| Coding sequence length (bp) | 1596 |
| Protein length (aa) | 532 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04820 | Trp_halogenase | Tryptophan halogenase | 6.6E-14 | 12 | 96 |
| PF04820 | Trp_halogenase | Tryptophan halogenase | 6.1E-17 | 109 | 390 |
| PF01494 | FAD_binding_3 | FAD binding domain | 8.0E-16 | 9 | 235 |
| PF12831 | FAD_oxidored | FAD dependent oxidoreductase | 1.0E-06 | 12 | 173 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0VZ69|THAL_CHOCO | Tryptophan 2-halogenase OS=Chondromyces crocatus GN=cmdE PE=4 SV=1 | 5 | 432 | 2.0E-70 |
| sp|P96800|Y1602_METBF | Uncharacterized protein Mbar_A1602 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A1602 PE=3 SV=2 | 12 | 354 | 4.0E-16 |
| sp|P95482|PRNC_PSEFL | Monodechloroaminopyrrolnitrin halogenase PrnC OS=Pseudomonas fluorescens GN=prnC PE=4 SV=1 | 12 | 335 | 6.0E-13 |
| sp|P26484|FIXC_AZOC5 | Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=fixC PE=3 SV=2 | 13 | 349 | 3.0E-06 |
| sp|Q6M083|GGR_METMP | Digeranylgeranylglycerophospholipid reductase OS=Methanococcus maripaludis (strain S2 / LL) GN=MMP0388 PE=3 SV=1 | 12 | 403 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071949 | FAD binding | Yes |
| GO:0004497 | monooxygenase activity | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0000166 | nucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0005488 | binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0036094 | small molecule binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|004740 MPNAQLPSRTTVLVIGGGPAGAYAASALARENIDTIVIEAAKFPRYHIGESMLPSLNSFMRFIGAEEKLRDHGFT TKLGAAVKFNQHKKEGYTDFTRGDVRNASCNVIRSEFDNMLLRHAEESGARVFEETKITDIEFETNGAEMRPTSA TYTRKNGEVGVVHFDYLVDASGRNGIVSTKYLKNRKMNQSLHNLACWGYWTGQKQYMPNSSRHNAPWFESLTDES GWAWFIPLHNGTVSVGIVMDSSISAQKKAEGRKATSDGNYTLRDHYLDQIQLVPGLKALLEEATLKEDGEHYVIR SAADYSYAADKYAGDHYRIIGDASAFIDPFFSSGVHLALLGGLTAAASIAASIKKQCAEEVAWKFHDVKVATAYT RFLLVVMSAYKQIRNQSVAVLSDVDEDNFDRVFDIFRPVIQGNSDVGKNLSENELERTIDFCKDIFAPTDPEMIE AVGARLRPELLAANSPILTNEEINIESQGDDEARIVLHRLNARKPVNQMYQGPDNLQVGDVGGYVAHIQVGALGL VEVAST* |
| Coding | >Agabi119p4|004740 ATGCCAAACGCACAACTACCATCCCGCACCACTGTCCTTGTTATTGGCGGTGGACCTGCTGGCGCTTACGCGGCT TCAGCTTTGGCCCGAGAGAACATCGACACCATCGTCATTGAGGCAGCCAAATTTCCACGATATCATATTGGCGAG AGTATGCTTCCATCCTTGAATTCGTTTATGCGATTTATTGGTGCCGAAGAAAAACTCCGAGACCATGGATTCACG ACGAAACTTGGAGCAGCTGTAAAGTTTAACCAACATAAGAAAGAAGGCTATACTGATTTTACACGAGGCGATGTC CGAAATGCGAGTTGTAACGTTATTCGCTCAGAATTCGACAACATGCTTCTACGCCACGCCGAGGAGTCGGGGGCT CGAGTTTTTGAGGAAACAAAGATCACTGATATCGAATTCGAAACCAACGGAGCAGAGATGCGTCCTACTTCAGCA ACCTATACACGGAAGAACGGCGAGGTTGGTGTAGTCCATTTTGATTACCTAGTGGATGCCTCTGGCAGGAATGGG ATAGTCTCCACCAAGTACCTGAAAAACCGCAAAATGAATCAGAGCTTGCACAACCTCGCATGTTGGGGATATTGG ACTGGCCAAAAGCAATACATGCCTAATAGTTCTCGTCACAACGCGCCATGGTTCGAATCTTTGACAGACGAAAGT GGCTGGGCATGGTTCATACCTTTACATAATGGTACGGTTTCGGTCGGAATCGTAATGGATAGTTCTATCAGTGCG CAGAAGAAAGCGGAAGGGAGGAAGGCAACATCCGACGGCAATTACACACTGAGAGATCATTACCTTGACCAGATC CAATTGGTGCCCGGGTTGAAAGCCTTGCTGGAAGAAGCAACGCTCAAAGAGGATGGCGAGCATTATGTTATTCGG AGCGCCGCAGACTATAGCTATGCGGCGGACAAGTACGCTGGGGACCATTATAGAATTATCGGCGACGCCTCTGCT TTCATCGACCCATTTTTTTCCAGTGGTGTTCATCTCGCCCTCCTTGGAGGCCTAACCGCAGCAGCATCAATCGCA GCATCAATCAAGAAACAGTGCGCGGAGGAAGTGGCTTGGAAATTCCACGATGTTAAAGTTGCGACGGCGTACACG AGATTTTTGCTGGTCGTTATGAGTGCGTACAAACAGATTCGAAACCAGTCAGTGGCAGTACTGTCAGATGTCGAC GAAGATAATTTTGATCGGGTTTTCGACATCTTCCGGCCTGTCATCCAGGGAAACTCAGACGTCGGGAAAAATTTA TCAGAAAATGAGCTTGAAAGGACAATTGACTTCTGCAAAGATATTTTTGCGCCGACAGATCCAGAGATGATTGAG GCAGTTGGTGCTCGCCTACGGCCGGAGCTACTTGCAGCAAACAGCCCCATCTTAACGAATGAGGAGATCAACATA GAGTCTCAAGGTGACGATGAAGCTAGAATAGTGTTACATCGCTTGAATGCCCGGAAGCCAGTCAACCAGATGTAT CAGGGGCCAGATAATCTCCAGGTGGGCGACGTAGGCGGGTACGTAGCACATATACAAGTTGGTGCACTCGGCCTT GTCGAAGTGGCATCGACGTGA |
| Transcript | >Agabi119p4|004740 ATGCCAAACGCACAACTACCATCCCGCACCACTGTCCTTGTTATTGGCGGTGGACCTGCTGGCGCTTACGCGGCT TCAGCTTTGGCCCGAGAGAACATCGACACCATCGTCATTGAGGCAGCCAAATTTCCACGATATCATATTGGCGAG AGTATGCTTCCATCCTTGAATTCGTTTATGCGATTTATTGGTGCCGAAGAAAAACTCCGAGACCATGGATTCACG ACGAAACTTGGAGCAGCTGTAAAGTTTAACCAACATAAGAAAGAAGGCTATACTGATTTTACACGAGGCGATGTC CGAAATGCGAGTTGTAACGTTATTCGCTCAGAATTCGACAACATGCTTCTACGCCACGCCGAGGAGTCGGGGGCT CGAGTTTTTGAGGAAACAAAGATCACTGATATCGAATTCGAAACCAACGGAGCAGAGATGCGTCCTACTTCAGCA ACCTATACACGGAAGAACGGCGAGGTTGGTGTAGTCCATTTTGATTACCTAGTGGATGCCTCTGGCAGGAATGGG ATAGTCTCCACCAAGTACCTGAAAAACCGCAAAATGAATCAGAGCTTGCACAACCTCGCATGTTGGGGATATTGG ACTGGCCAAAAGCAATACATGCCTAATAGTTCTCGTCACAACGCGCCATGGTTCGAATCTTTGACAGACGAAAGT GGCTGGGCATGGTTCATACCTTTACATAATGGTACGGTTTCGGTCGGAATCGTAATGGATAGTTCTATCAGTGCG CAGAAGAAAGCGGAAGGGAGGAAGGCAACATCCGACGGCAATTACACACTGAGAGATCATTACCTTGACCAGATC CAATTGGTGCCCGGGTTGAAAGCCTTGCTGGAAGAAGCAACGCTCAAAGAGGATGGCGAGCATTATGTTATTCGG AGCGCCGCAGACTATAGCTATGCGGCGGACAAGTACGCTGGGGACCATTATAGAATTATCGGCGACGCCTCTGCT TTCATCGACCCATTTTTTTCCAGTGGTGTTCATCTCGCCCTCCTTGGAGGCCTAACCGCAGCAGCATCAATCGCA GCATCAATCAAGAAACAGTGCGCGGAGGAAGTGGCTTGGAAATTCCACGATGTTAAAGTTGCGACGGCGTACACG AGATTTTTGCTGGTCGTTATGAGTGCGTACAAACAGATTCGAAACCAGTCAGTGGCAGTACTGTCAGATGTCGAC GAAGATAATTTTGATCGGGTTTTCGACATCTTCCGGCCTGTCATCCAGGGAAACTCAGACGTCGGGAAAAATTTA TCAGAAAATGAGCTTGAAAGGACAATTGACTTCTGCAAAGATATTTTTGCGCCGACAGATCCAGAGATGATTGAG GCAGTTGGTGCTCGCCTACGGCCGGAGCTACTTGCAGCAAACAGCCCCATCTTAACGAATGAGGAGATCAACATA GAGTCTCAAGGTGACGATGAAGCTAGAATAGTGTTACATCGCTTGAATGCCCGGAAGCCAGTCAACCAGATGTAT CAGGGGCCAGATAATCTCCAGGTGGGCGACGTAGGCGGGTACGTAGCACATATACAAGTTGGTGCACTCGGCCTT GTCGAAGTGGCATCGACGTGA |
| Gene | >Agabi119p4|004740 ATGCCAAACGCACAACTAGTAAGCCCTGTCGTTTTGTGTGGTTACAGGCGACCGATAGATGATGACATTTCGTTA GCCATCCCGCACCACTGTCCTTGTTATTGGCGGTGGACCTGCTGGCGCTTACGCGGCTTCAGCTTTGGCCCGAGA GAACATCGACACCATCGTCATTGAGGCAGCCAAATTTCCACGGTAAGATATTCTCCTCTCTACTAGCCCCTATGT CCCTGAAACCGCGGAGATATCATATTGGCGAGAGTATGCTTCCATCCTTGAATTCGTTTATGCGATTTATTGGTG CCGAAGAAAAACTCCGAGACCATGGATTCACGACGAAAGTATGTCCGATATTCCTCGATCAATCACCAACAAACT TACACTGCCACAGCTTGGAGCAGCTGTAAAGTTTAACCAACATAAGAAAGAAGGCTGTAAGTCATTGATAGTTAC GAAAAGCAGCACGACCTGAAAAAAACCGCTTAGATACTGATTTTACACGAGGCGATGTCCGAAATGCGAGTTGTA ACGTTGTGAGTGCTTCGGCCAAATCTTTGACCCATTCTTGTACTTGAGCTCGTCCCTAGATTCGCTCAGAATTCG ACAACATGCTTCTACGCCACGCCGAGGAGTCGGGGGCTCGAGTTTTTGAGGAAACAAAGATCACTGATATCGAAT TCGAAACCAACGGAGCAGAGATGCGTCCTACTTCAGCAACCTATACACGGAAGAACGGCGAGGTTGGTGTAGTCC ATTTTGATTACCTAGTGGATGCCTCTGGCAGGAATGGGATAGTCTCCACCAAGGTATGTCATTTACACGGAAACG ACTCAAAGATATGATTAGACGCGTCGATGTAGTACCTGAAAAACCGCAAAATGAATCAGAGCTTGCACAACCTCG CATGTTGGGGATATTGGACTGGCCAAAAGCAATACATGCCTAATAGTTCTCGTCACAACGCGCCATGGTTCGAAT CTTTGACAGGTGAGACTTCTCCTTGATCCGGATCTAATACATCGAGCGTTCAAATAAAAATGGCAGACGAAAGTG GCTGGGCATGGTTCATACCTTTACATAATGGTACGGTGAGTGCCCTTCAACACTACACTAGAAGAGCATAGTCTG ATAGAAGTACCGTAAGGTTTCGGTCGGAATCGTAATGGATAGTTCTATCAGTGCGCAGAAGAAAGCGGAAGGGAG GAAGGCAACATCCGACGGCAATTACACACTGAGAGATCATTACCTTGACCAGATCCAATTGGTGCCCGGGTTGAA AGCCTTGCTGGAAGAAGCAACGCTCAAAGAGGATGGCGAGCATTATGTTATTCGGAGCGCCGCAGACTATAGCTA TGCGGCGGACAAGTACGCTGGGGACCATTATAGAATTATCGGCGACGCCTCTGGTAGGTTCCCTAAATCCAATGC GGCAAGACAAAAAGGCCTGACTACGGAGCAGCTTTCATCGACCCATTTTTTTCCAGTGGTGTTCATCTCGCCCTC CTTGGAGGCCTAACCGCAGCAGCATCAATCGCAGCATCAATCAAGAAACAGTGCGCGGAGGAAGTGGCTTGGAAA TTCCACGATGTTAAAGTTGCGACGGCGTACACGAGGTAATTTCTTGATGAACAATTATGTCAAAGCAGCCTTCGA TGACATGGTTGTCTAGATTTTTGCTGGTCGTTATGAGTGCGTACAAACAGATTCGAAACCAGTCAGTGGCAGTAC TGTCAGATGTCGACGAAGATAATTTTGATCGGGTTTTCGACATCTTCCGGCCTGGTAGGCACCTATTCCTATTCA AAGGTCCCTTGAGAAGGCTGACCACTAGTAGTCATCCAGGGAAACTCAGACGTCGGGAAAAATTTATCAGAAAAT GAGCTTGAAAGGACAATTGACTTCTGCAAAGGTAGATATTTATATCGCCAGCTATGAGACCACTGCCTAAGATGA TCATTAGATATTTTTGCGCCGACAGATCCAGAGATGATTGAGGCAGTTGGTGCTCGCCTACGGCCGGAGCTACTT GCAGCAAACAGCCCCATCTTAACGAATGAGGAGATCAACATAGAGTCTCAAGGTGACGATGAAGCTAGAATAGTG TTACATCGCTTGAATGCCCGGAAGCCAGTCAACCAGATGTATCAGGGGCCAGATAATCTCCAGGTGGGCGACGTA GGCGGGTACGTAGCACATATACAAGTTGGTGCACTCGGCCTTGTCGAAGTGGCATCGACGTGA |