© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|003990 |
| Gene name | |
| Location | scaffold_01a:1027474..1028483 |
| Strand | + |
| Gene length (bp) | 1009 |
| Transcript length (bp) | 810 |
| Coding sequence length (bp) | 810 |
| Protein length (aa) | 270 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00035 | dsrm | Double-stranded RNA binding motif | 4.6E-09 | 202 | 258 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|003990 MSGFPPLPPINDMDMVLAVFTHESLLAPAQDDFREPRRLVHLGERVLEQAITYHYFMKKPVMPADEIEEQLQHPP FDFHRLLYEYGLKEKIRYAPGQFFDSPEEAKQFFSKYIGAAFLQNGIGSIQEWVSQTLDPGCITPSLPTGNTSRA PQPSNSNFSAAPPPPNIPPPSQPPPPSGFYQQAQSPPSMTNARGFQILAQFNMTAHQRGYTVTYPARSEGPHHTP TWHVQCCLDNQVKGEGSGQNQKQAKELAARQAWMAMGWGTLPES* |
| Coding | >Agabi119p4|003990 ATGTCCGGATTCCCCCCTCTTCCGCCTATAAATGATATGGATATGGTATTGGCCGTATTTACACACGAATCCTTG TTAGCCCCGGCGCAAGATGATTTCAGAGAGCCCAGGCGTCTGGTGCACCTCGGCGAACGTGTCTTAGAACAGGCT ATCACCTATCACTACTTCATGAAAAAACCAGTCATGCCTGCCGATGAAATCGAGGAACAACTTCAACACCCTCCC TTTGATTTCCATCGTCTGTTATATGAATATGGGCTCAAAGAGAAGATACGATACGCTCCTGGACAGTTCTTCGAT TCGCCAGAGGAAGCGAAACAATTCTTCAGTAAATATATCGGCGCCGCATTCTTACAAAATGGCATAGGATCGATT CAGGAGTGGGTCTCGCAGACTCTAGATCCTGGATGTATTACACCATCCTTACCCACAGGGAATACCTCACGCGCA CCTCAGCCATCAAATTCAAATTTCTCAGCGGCACCTCCCCCTCCGAACATCCCTCCCCCGAGTCAGCCCCCACCT CCATCAGGGTTCTACCAACAAGCGCAATCTCCACCATCAATGACGAATGCAAGAGGTTTCCAGATATTAGCCCAA TTTAATATGACCGCTCATCAGAGAGGTTATACTGTGACGTATCCAGCCCGGAGCGAAGGTCCTCATCACACTCCT ACTTGGCATGTCCAGTGCTGCCTAGATAATCAGGTTAAAGGAGAAGGGAGTGGTCAAAACCAGAAACAGGCCAAG GAATTAGCGGCTCGGCAAGCTTGGATGGCAATGGGTTGGGGTACTCTACCTGAAAGTTGA |
| Transcript | >Agabi119p4|003990 ATGTCCGGATTCCCCCCTCTTCCGCCTATAAATGATATGGATATGGTATTGGCCGTATTTACACACGAATCCTTG TTAGCCCCGGCGCAAGATGATTTCAGAGAGCCCAGGCGTCTGGTGCACCTCGGCGAACGTGTCTTAGAACAGGCT ATCACCTATCACTACTTCATGAAAAAACCAGTCATGCCTGCCGATGAAATCGAGGAACAACTTCAACACCCTCCC TTTGATTTCCATCGTCTGTTATATGAATATGGGCTCAAAGAGAAGATACGATACGCTCCTGGACAGTTCTTCGAT TCGCCAGAGGAAGCGAAACAATTCTTCAGTAAATATATCGGCGCCGCATTCTTACAAAATGGCATAGGATCGATT CAGGAGTGGGTCTCGCAGACTCTAGATCCTGGATGTATTACACCATCCTTACCCACAGGGAATACCTCACGCGCA CCTCAGCCATCAAATTCAAATTTCTCAGCGGCACCTCCCCCTCCGAACATCCCTCCCCCGAGTCAGCCCCCACCT CCATCAGGGTTCTACCAACAAGCGCAATCTCCACCATCAATGACGAATGCAAGAGGTTTCCAGATATTAGCCCAA TTTAATATGACCGCTCATCAGAGAGGTTATACTGTGACGTATCCAGCCCGGAGCGAAGGTCCTCATCACACTCCT ACTTGGCATGTCCAGTGCTGCCTAGATAATCAGGTTAAAGGAGAAGGGAGTGGTCAAAACCAGAAACAGGCCAAG GAATTAGCGGCTCGGCAAGCTTGGATGGCAATGGGTTGGGGTACTCTACCTGAAAGTTGA |
| Gene | >Agabi119p4|003990 ATGTCCGGATTCCCCCCTCTTCCGCCTATAAATGATATGGATATGGTATTGGCCGTATTTACACACGAATCCTTG TTAGCCCCGGCGCAAGATGATTTCAGAGAGCCCAGGCGTCTGGTGCACCTCGGCGAACGTGTCTTAGAACAGGCT ATCACCTATCACTACTTCATGAAAAAACCAGTCATGCCTGCCGATGAAATCGAGGTATCATCGATCGTACCCTTC TTCCCAGACCCGCCTGAGTCATTCTATAGGAACAACTTCAACACCCTCCCTTTGATTTCCATCGTCTGTTATATG AATATGGGCTCAAAGAGAAGATACGATACGCTCCTGGACAGTTCTTCGATTCGCCAGAGGTATGTGTATGAAAAA CTAACACAAACGAAGATTTATCTCTATTAGGAAGCGAAACAATTCTTCAGTAAATATATCGGCGCCGCATTCTTA CAAAATGGCATAGGATCGATTCAGGAGTGGGTCTCGCAGACTCTAGATCCTGGATGTATTACACCATCCTTACCC ACAGGGAATACCTCACGCGCACCTCAGCCATCAAATTCAAATTTCTCAGCGGCACCTCCCCCTCCGAACATCCCT CCCCCGAGTCAGCCCCCACCTCCATCAGGGTTCTACCAACAAGCGCAATCTCCACCATCAATGACGAATGCAAGA GGTTTCCAGATATTAGCCCAATTTAATATGACCGCTCATCAGAGAGGTTATACTGTGACGTATCCAGCCCGGAGC GAAGGTCCTCATCACACTCCTACTTGGCATGTCCAGTGCTGCCGTGAGTGACATTTTTTTTTGGTAGTACATTGT TATTTCTTACCAATCTAATAGTAGATAATCAGGTTAAAGGAGAAGGGAGTGGTCAAAACCAGAAACAGGCCAAGG AATTAGCGGCTCGGCAAGCTTGGATGGCAATGGGTTGGGGTACTCGTAAGTCTCCCTGGTTTATACGTTTGAAAT AATGCTGATGCTGCCAAAAGTACCTGAAAGTTGA |