Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	Agabi119p4|003680
Gene name
Location	scaffold_01a:959365..961986
Strand	-
Gene length (bp)	2621
Transcript length (bp)	1941
Coding sequence length (bp)	1941
Protein length (aa)	647

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08427	ARMH3_C	Armadillo-like helical domain-containing protein 3, C-terminal	1.7E-25	422	599

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|Q6PD19|CJ076_MOUSE	UPF0668 protein C10orf76 homolog OS=Mus musculus PE=1 SV=2	21	593	1.0E-23
sp|Q5T2E6|CJ076_HUMAN	UPF0668 protein C10orf76 OS=Homo sapiens GN=C10orf76 PE=2 SV=1	21	593	2.0E-23
sp|Q6PGW3|CJ076_DANRE	UPF0668 protein C10orf76 homolog OS=Danio rerio GN=zgc:63733 PE=2 SV=2	36	564	2.0E-21
sp|Q6DCT2|CJ076_XENLA	UPF0668 protein C10orf76 homolog OS=Xenopus laevis PE=2 SV=2	36	593	4.0E-20
sp|O42972|YGZ2_SCHPO	UPF0588 membrane protein C20F10.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC20F10.02c PE=3 SV=1	124	536	9.0E-15

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|003680 MNIPQRSLQASPKFAKLYSRLFEGIPITEICGPNQTQDHDQFYDELLTLEIDRDFVAGKLANTSRDVLLGASKVF LNSWFRACIRLTVSTGYDDTKKNNALETLAICVRGVFLKSMSGWEIMEVLAGSVNESDGVLNDFTNMVAAILSDT QAPTNTRHLALQLALLYMCGAGQSSLGSYFLRRDFFSIIVCFVKSPKTERFSFEATLLLCILANFHRSDAARLNP YLRKLSTCDDIDFFRKVAWTFNFALNTAVRAYFKLLDDAPQQDLASGIASWISSWRPDKALSPTPIDPPKELFKE QPIEAAVALLPILEMVIANKIFASILSQEVSSISEKNNASSQQSSPAAFLTVISLSSYILAHASSAASPRALAYA GLSLKTLLSFLEASELTNGLFNPCQYSIRLCRQRMPMLPFYRGARAPVCAILDCCVLWLRHNLQYKLDVSSYLLS INIIQRVLWQLRKNNIRLDYDWNDLWSATLGLLNFIATKTQSIVTHTGLESLVDETLALLEYALYQSEKVLSSPG AIHEFIYQLIRFSDGLRKLKILVFDNKKNLATSLNRTSWISARSTEERLDNILKTVIFYEVKVSSMNAKSAKDAM RVVAKEVESDGLHGVKPTLDSEPPKRVEEAVSFIRYCYNDILALMP*
Coding	>Agabi119p4|003680 ATGAACATTCCTCAAAGGAGTCTCCAGGCCTCTCCGAAATTCGCCAAGTTATACTCTAGACTCTTTGAGGGTATA CCAATAACAGAAATTTGTGGTCCCAACCAGACACAAGATCATGATCAGTTCTATGACGAGCTCCTGACGTTGGAA ATAGACCGCGATTTCGTCGCCGGAAAATTAGCAAATACGTCGAGGGACGTTTTATTAGGCGCTTCGAAAGTGTTT TTAAACTCATGGTTTAGGGCTTGTATACGTTTAACAGTTTCGACTGGATACGACGACACCAAAAAGAACAATGCT CTGGAAACTCTCGCTATATGCGTGCGAGGCGTATTCTTGAAGTCCATGTCAGGATGGGAGATTATGGAAGTATTA GCAGGGAGCGTGAATGAGAGTGACGGAGTATTGAACGATTTCACGAACATGGTTGCAGCTATATTATCAGATACT CAGGCTCCTACTAATACAAGACATCTGGCTCTGCAATTGGCCCTGCTATATATGTGCGGGGCCGGACAGAGTAGT CTTGGTTCTTACTTTCTTAGGCGGGATTTCTTCTCGATAATCGTTTGTTTCGTCAAAAGTCCCAAGACGGAAAGA TTCTCATTCGAAGCAACCCTTTTGCTGTGTATTCTCGCTAACTTCCATCGCTCTGACGCCGCTCGTCTCAATCCA TACCTCAGAAAGTTGTCGACATGCGATGATATAGACTTTTTCAGAAAGGTCGCCTGGACTTTCAACTTTGCTTTG AATACTGCCGTACGAGCGTATTTCAAGCTTTTGGATGACGCACCTCAGCAAGATCTAGCTTCGGGAATTGCCTCA TGGATTTCTTCCTGGAGGCCGGACAAGGCACTTTCTCCTACACCTATAGATCCGCCGAAAGAGCTTTTCAAAGAA CAGCCTATTGAAGCAGCTGTTGCGCTTCTTCCTATCCTAGAGATGGTGATAGCGAACAAAATCTTCGCCTCCATC TTGTCCCAGGAAGTCTCTTCAATCAGCGAGAAGAACAACGCTTCGAGTCAACAATCCTCACCTGCGGCCTTCCTG ACAGTGATTTCACTGTCGTCGTACATTCTGGCACATGCCTCCTCTGCCGCATCTCCTAGAGCTCTTGCCTATGCT GGCCTTTCGTTGAAGACGCTTCTCAGCTTCCTCGAAGCTTCAGAACTCACGAACGGACTCTTCAATCCTTGTCAA TATTCTATACGGTTGTGTCGACAGAGGATGCCAATGCTTCCGTTTTACAGAGGCGCCAGGGCTCCTGTCTGTGCT ATATTAGATTGCTGCGTACTTTGGCTCCGGCACAATCTGCAGTATAAGCTGGATGTATCGTCATATCTATTGTCT ATCAACATCATACAGCGGGTACTGTGGCAATTGCGGAAGAACAATATTCGGCTTGACTATGATTGGAACGATCTA TGGTCTGCTACCCTGGGCCTTCTCAACTTCATTGCGACCAAAACCCAGAGTATCGTTACTCATACCGGCTTAGAG TCTCTCGTTGACGAAACTCTTGCTTTATTGGAGTATGCATTGTATCAAAGCGAAAAGGTCCTTTCGTCACCCGGA GCCATACACGAATTCATTTATCAGCTGATTCGTTTCTCGGATGGTTTACGAAAGCTTAAAATATTAGTTTTTGAC AATAAGAAGAACCTGGCGACATCATTAAATCGAACGAGCTGGATCAGTGCGCGTAGTACAGAGGAACGACTCGAT AATATCTTAAAAACTGTGATTTTCTATGAAGTCAAAGTATCAAGTATGAATGCGAAATCAGCAAAAGATGCAATG AGGGTGGTTGCTAAAGAAGTCGAAAGTGATGGGTTGCATGGAGTTAAGCCGACACTTGACTCGGAACCTCCGAAG CGCGTCGAGGAAGCAGTGAGCTTTATTCGATACTGCTACAATGATATACTAGCACTTATGCCTTAG
Transcript	>Agabi119p4|003680 ATGAACATTCCTCAAAGGAGTCTCCAGGCCTCTCCGAAATTCGCCAAGTTATACTCTAGACTCTTTGAGGGTATA CCAATAACAGAAATTTGTGGTCCCAACCAGACACAAGATCATGATCAGTTCTATGACGAGCTCCTGACGTTGGAA ATAGACCGCGATTTCGTCGCCGGAAAATTAGCAAATACGTCGAGGGACGTTTTATTAGGCGCTTCGAAAGTGTTT TTAAACTCATGGTTTAGGGCTTGTATACGTTTAACAGTTTCGACTGGATACGACGACACCAAAAAGAACAATGCT CTGGAAACTCTCGCTATATGCGTGCGAGGCGTATTCTTGAAGTCCATGTCAGGATGGGAGATTATGGAAGTATTA GCAGGGAGCGTGAATGAGAGTGACGGAGTATTGAACGATTTCACGAACATGGTTGCAGCTATATTATCAGATACT CAGGCTCCTACTAATACAAGACATCTGGCTCTGCAATTGGCCCTGCTATATATGTGCGGGGCCGGACAGAGTAGT CTTGGTTCTTACTTTCTTAGGCGGGATTTCTTCTCGATAATCGTTTGTTTCGTCAAAAGTCCCAAGACGGAAAGA TTCTCATTCGAAGCAACCCTTTTGCTGTGTATTCTCGCTAACTTCCATCGCTCTGACGCCGCTCGTCTCAATCCA TACCTCAGAAAGTTGTCGACATGCGATGATATAGACTTTTTCAGAAAGGTCGCCTGGACTTTCAACTTTGCTTTG AATACTGCCGTACGAGCGTATTTCAAGCTTTTGGATGACGCACCTCAGCAAGATCTAGCTTCGGGAATTGCCTCA TGGATTTCTTCCTGGAGGCCGGACAAGGCACTTTCTCCTACACCTATAGATCCGCCGAAAGAGCTTTTCAAAGAA CAGCCTATTGAAGCAGCTGTTGCGCTTCTTCCTATCCTAGAGATGGTGATAGCGAACAAAATCTTCGCCTCCATC TTGTCCCAGGAAGTCTCTTCAATCAGCGAGAAGAACAACGCTTCGAGTCAACAATCCTCACCTGCGGCCTTCCTG ACAGTGATTTCACTGTCGTCGTACATTCTGGCACATGCCTCCTCTGCCGCATCTCCTAGAGCTCTTGCCTATGCT GGCCTTTCGTTGAAGACGCTTCTCAGCTTCCTCGAAGCTTCAGAACTCACGAACGGACTCTTCAATCCTTGTCAA TATTCTATACGGTTGTGTCGACAGAGGATGCCAATGCTTCCGTTTTACAGAGGCGCCAGGGCTCCTGTCTGTGCT ATATTAGATTGCTGCGTACTTTGGCTCCGGCACAATCTGCAGTATAAGCTGGATGTATCGTCATATCTATTGTCT ATCAACATCATACAGCGGGTACTGTGGCAATTGCGGAAGAACAATATTCGGCTTGACTATGATTGGAACGATCTA TGGTCTGCTACCCTGGGCCTTCTCAACTTCATTGCGACCAAAACCCAGAGTATCGTTACTCATACCGGCTTAGAG TCTCTCGTTGACGAAACTCTTGCTTTATTGGAGTATGCATTGTATCAAAGCGAAAAGGTCCTTTCGTCACCCGGA GCCATACACGAATTCATTTATCAGCTGATTCGTTTCTCGGATGGTTTACGAAAGCTTAAAATATTAGTTTTTGAC AATAAGAAGAACCTGGCGACATCATTAAATCGAACGAGCTGGATCAGTGCGCGTAGTACAGAGGAACGACTCGAT AATATCTTAAAAACTGTGATTTTCTATGAAGTCAAAGTATCAAGTATGAATGCGAAATCAGCAAAAGATGCAATG AGGGTGGTTGCTAAAGAAGTCGAAAGTGATGGGTTGCATGGAGTTAAGCCGACACTTGACTCGGAACCTCCGAAG CGCGTCGAGGAAGCAGTGAGCTTTATTCGATACTGCTACAATGATATACTAGCACTTATGCCTTAG
Gene	>Agabi119p4|003680 ATGAACATTCCTCAAAGGAGTCTCCAGGCCTCTCCGAAATTCGCCAAGTTATACTCTAGACTCTTTGAGGGTATA CCAATAACAGAAATTTGTGGTCCCAACCAGACACAAGATCATGATCAGTTCTATGACGAGCTCCTGACGTTGGAA ATAGACCGCGATTTCGTCGCCGGAAAATTAGCAAATACGTCGAGGGACGTTTTATTAGGCGCTTCGAAAGTACGT TCGGTGAGGATTTAGCGATGAGAAAATCAGTTGCTCATCGAGGTAAGGTGTTTTTAAACTCATGGTTTAGGGCTT GTATACGTTTAACAGTTTCGACTGGATACGACGACACCAAAAAGAACAATGCTCTGGAAACTCTCGCTATATGCG TGCGAGGCGTATTCTTGAAGTCCATGTCAGGATGGGAGATTATGGAAGTATTAGCAGGGAGCGTGAATGAGAGTG ACGGAGTATTGAACGTATGAGAAGTTAATCAATATTCAATACTCAACCTTTACTTATGCATCTGTGCATTAATAT GTTCGGCAGGATTTCACGAACATGGTTGCAGCTATATTATCAGATACTCAGGCTCCTAGTGAGTTACCTTCCTCT ACGTGTTACTAGCAGTACTGCTGCTGAAGTTCAATTTCATCTTGTCAGCTAATACAAGACATCTGGCTCTGCAAT TGGCCCTGCTATATATGTGCGGGGCCGGACAGAGTAGTCTTGGTTCTTACTTTCTTAGGCGGGATTTCTTCTCGA TAATCGTTTGTGTGAGTGGCTTCCGTAAAAGCTCTACAGATCCCCCCTATTCAAGTTTGTCGCATTTTGGTGAGG TAGTTCGTCAAAAGTCCCAAGACGGAAAGATTCTCATTCGAAGCAACCCTTTTGCTGTGTATTCTCGCTAACTTC CATCGCTCTGACGCCGCTCGTCTCAATCCATACCTCAGAAAGTTGTCGACATGCGATGATATAGACTTTTTCAGA AAGGTCGCCTGGACTTTCAACTTTGCTTTGAATACTGCCGTACGGTTAGTGATACTCACATCTTGGATGTGTTGG CCAGCATATAGCCACTCATACAACATTCAGAGCGTATTTCAAGCTTTTGGATGACGCACCTCAGCAAGATCTAGC TTCGGGAATTGCCTCATGGATTTCTTCCTGGAGGCCGGACAAGGCACTTTCTCCTACACCTATAGATCCGCCGAA AGAGCTTTTCAAAGAACAGTAAAGAATGCCCTTGATTTGTCCTTGGCGCCACCACTTACAACATATGTTCGTGTC AGGCCTATTGAAGCAGCTGTTGCGCTTCTTCCTATCCTAGAGATGGTGATAGCGAACAAAATCTTCGCCTCCATC TTGTCCCAGGAAGTCTCTTCAATCAGCGAGAAGAACAACGCTTCGAGTCAACAATCCTCACCTGCGGCCTTCCTG ACAGTGATTTCACTGTCGTCGTACATTCTGGCACATGCCTCCTCTGCCGCATCTCCTAGAGCTCTTGCCTATGCT GGCCTTTCGTTGAAGACGCTTCTCAGCTTCCTCGAAGCTTCAGAACTCACGAACGGACTCTTCAATCCTTGTCAA TATTCTATACGGTTGTGTCGACAGGTGGGCTTAGTTCCGGCTATGTAGCCAGATTTGAAAACCGACCCATCTCCA GAGGATGCCAATGCTTCCGTTTTACAGAGGCGCCAGGGCTCCTGTCTGTGCTATATTAGATTGCTGCGTACTTTG GCTCCGGCACAATCTGCAGTATAAGCTGGATGTATCGTCATATCTGTTCGAAGCATCGTCACGAACTTGTGAACC ACAACTTACCGAGAGTTATCCAGATTGTCTATCAACATCATACAGCGGGTACTGTGGCAATTGCGGAAGAACAAT ATTCGGCTTGGCGAGTTACTCGTTCACGATAGTGTCATGCTCTATCTCATTTTCGACCAGACTATGATTGGAACG ATCTATGGTCTGCTACCCTGGGCCTTCTCAACTTCATTGCGACCAAAACCCAGAGTATCGTTACTCATACCGGCT TAGAGTCTCTCGTTGACGAAGTACATCATTCATTGCGGATGCGATGGGAATCTAACGTCGCTACACTCGCAGACT CTTGCTTTATTGGAGTATGCATTGTATCAAAGCGAAAAGGTCCTTTCGTCACCCGGAGCCATACACGAATTCATT GTGAGCCGGTTGCCCTCCGGAAGGTGTGGCTCTAATCTTTATTCTAGTATCAGCTGATTCGTTTCTCGGATGGTT TACGAAAGCTTAAAATATTAGTTTTTGACAATAAGAAGAACCTGGCGACATCATTAAATCGAACGAGCTGGATCA GTGCGCGTAGTACAGAGGAACGACTCGATAATATCTTAAAAACTGTGATTTTCTATGAAGTCAAAGTATCAAGTA TGAATGCGAAATCAGCAAAAGATGCAATGAGGGTGGTTGCTAAAGAAGTCGAAAGTGATGGGTTGCATGGAGTTA AGCCGACACTTGACTCGGAACCTCCGTAAGTCGGGATCAATTTAACTTGCGATTCCGCTGATCGGCCTAACCACA GGAAGCGCGTCGAGGAAGCAGTGAGCTTTATTCGATACTGCTACAATGATATACTAGCACTTATGCCTTAG