Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|001830
Gene name
Locationscaffold_01a:487979..489227
Strand+
Gene length (bp)1248
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01764 Lipase_3 Lipase (class 3) 9.2E-20 104 241

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O59952|LIP_THELA Lipase OS=Thermomyces lanuginosus GN=LIP PE=1 SV=1 19 255 2.0E-13
sp|P19515|LIP_RHIMI Lipase OS=Rhizomucor miehei PE=1 SV=2 5 258 2.0E-12
sp|P61872|LIP_RHIOR Lipase OS=Rhizopus oryzae PE=1 SV=1 29 255 6.0E-12
sp|P61871|LIP_RHINI Lipase OS=Rhizopus niveus PE=1 SV=1 29 255 6.0E-12
sp|P61869|MDLA_PENCY Mono- and diacylglycerol lipase OS=Penicillium cyclopium GN=mdlA PE=3 SV=1 6 285 4.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|O59952|LIP_THELA Lipase OS=Thermomyces lanuginosus GN=LIP PE=1 SV=1 19 255 2.0E-13
sp|P19515|LIP_RHIMI Lipase OS=Rhizomucor miehei PE=1 SV=2 5 258 2.0E-12
sp|P61872|LIP_RHIOR Lipase OS=Rhizopus oryzae PE=1 SV=1 29 255 6.0E-12
sp|P61871|LIP_RHINI Lipase OS=Rhizopus niveus PE=1 SV=1 29 255 6.0E-12
sp|P61869|MDLA_PENCY Mono- and diacylglycerol lipase OS=Penicillium cyclopium GN=mdlA PE=3 SV=1 6 285 4.0E-09
sp|P61870|MDLA_PENCA Mono- and diacylglycerol lipase OS=Penicillium camembertii GN=mdlA PE=1 SV=1 6 285 4.0E-09
sp|B8A8C9|PLA5_ORYSI Phospholipase A1-II 5 OS=Oryza sativa subsp. indica GN=OsI_03470 PE=3 SV=1 148 258 4.0E-08
sp|Q5NAI4|PLA5_ORYSJ Phospholipase A1-II 5 OS=Oryza sativa subsp. japonica GN=Os01g0710700 PE=2 SV=1 148 258 8.0E-08
sp|Q9SJI7|PLA20_ARATH Phospholipase A1-IIdelta OS=Arabidopsis thaliana GN=At2g42690 PE=1 SV=1 148 245 4.0E-07
sp|Q0CBM7|FAEA_ASPTN Probable feruloyl esterase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=faeA PE=3 SV=1 135 251 3.0E-06
sp|A2ZW16|PLA1_ORYSJ Phospholipase A1-II 1 OS=Oryza sativa subsp. japonica GN=Os01g0651100 PE=3 SV=2 148 266 4.0E-06
sp|A2WT95|PLA1_ORYSI Phospholipase A1-II 1 OS=Oryza sativa subsp. indica GN=OsI_03083 PE=3 SV=2 148 266 4.0E-06
sp|Q9P979|FAEA_ASPAW Feruloyl esterase A OS=Aspergillus awamori GN=faeA PE=1 SV=3 138 251 5.0E-06
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GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|001830
MLTSRTFLAVALAVLSVGASPIQLSKRQSITALTSAQINAFTAFTHFASTAYCQPSTTSSWTCGANCNANSDFIP
TASGGNGGSVQFWYVGFSPSQGSVIVGHQGTDTSEIEALLTDAQAIQKNLDSGLFPGVPSSVEVHGAKSLTASQT
STASAVLSAVRTTISRHGASRVTIVGHSLGCAIAMLDGIYLPLHISGVTFRTIGYGCPRVGNAEFANYVDSHSDF
THINNKKDIVPILPGRFLGYAHAAGEVHISENNQWLSCPGHDNTSSQCIVGDVPNIFEGNPDDHSGPYNGITMGC
*
Coding >Agabi119p4|001830
ATGTTGACTTCCCGTACCTTCCTTGCGGTCGCGTTGGCTGTTCTTTCTGTCGGCGCTAGTCCGATCCAGCTTTCG
AAACGACAGAGCATTACGGCCCTCACTTCTGCTCAAATCAATGCGTTTACGGCCTTCACTCATTTCGCCAGCACA
GCGTATTGCCAACCGAGTACTACTAGCTCATGGACATGTGGAGCCAACTGTAATGCCAATTCTGATTTCATCCCA
ACGGCATCAGGTGGCAATGGAGGATCTGTACAGTTCTGGTATGTTGGGTTCTCACCTTCTCAGGGATCAGTGATT
GTGGGGCATCAAGGAACTGATACCAGCGAAATTGAGGCGCTTCTTACAGATGCTCAAGCCATCCAAAAGAATCTT
GACTCTGGACTTTTCCCCGGAGTTCCTTCCTCAGTTGAAGTGCACGGCGCGAAATCGCTAACCGCTAGTCAAACC
AGCACTGCATCGGCTGTTCTATCAGCTGTACGAACCACGATCTCTCGACATGGTGCATCGAGAGTTACAATTGTT
GGTCACTCTCTGGGTTGTGCTATCGCTATGCTAGATGGCATATACCTTCCCCTTCACATCAGTGGTGTGACGTTC
CGTACTATCGGTTATGGTTGTCCCAGGGTTGGTAACGCAGAATTCGCCAACTATGTCGACTCTCACAGCGATTTT
ACGCACATCAATAATAAAAAGGACATTGTTCCTATTCTTCCTGGCCGATTCTTGGGCTATGCTCATGCTGCTGGT
GAAGTTCACATTTCAGAAAATAACCAATGGCTCTCTTGTCCCGGCCACGACAACACCAGCTCGCAGTGCATCGTC
GGTGATGTCCCAAACATCTTTGAGGGTAACCCGGATGACCACAGTGGTCCTTACAATGGTATAACCATGGGCTGT
TAA
Transcript >Agabi119p4|001830
ATGTTGACTTCCCGTACCTTCCTTGCGGTCGCGTTGGCTGTTCTTTCTGTCGGCGCTAGTCCGATCCAGCTTTCG
AAACGACAGAGCATTACGGCCCTCACTTCTGCTCAAATCAATGCGTTTACGGCCTTCACTCATTTCGCCAGCACA
GCGTATTGCCAACCGAGTACTACTAGCTCATGGACATGTGGAGCCAACTGTAATGCCAATTCTGATTTCATCCCA
ACGGCATCAGGTGGCAATGGAGGATCTGTACAGTTCTGGTATGTTGGGTTCTCACCTTCTCAGGGATCAGTGATT
GTGGGGCATCAAGGAACTGATACCAGCGAAATTGAGGCGCTTCTTACAGATGCTCAAGCCATCCAAAAGAATCTT
GACTCTGGACTTTTCCCCGGAGTTCCTTCCTCAGTTGAAGTGCACGGCGCGAAATCGCTAACCGCTAGTCAAACC
AGCACTGCATCGGCTGTTCTATCAGCTGTACGAACCACGATCTCTCGACATGGTGCATCGAGAGTTACAATTGTT
GGTCACTCTCTGGGTTGTGCTATCGCTATGCTAGATGGCATATACCTTCCCCTTCACATCAGTGGTGTGACGTTC
CGTACTATCGGTTATGGTTGTCCCAGGGTTGGTAACGCAGAATTCGCCAACTATGTCGACTCTCACAGCGATTTT
ACGCACATCAATAATAAAAAGGACATTGTTCCTATTCTTCCTGGCCGATTCTTGGGCTATGCTCATGCTGCTGGT
GAAGTTCACATTTCAGAAAATAACCAATGGCTCTCTTGTCCCGGCCACGACAACACCAGCTCGCAGTGCATCGTC
GGTGATGTCCCAAACATCTTTGAGGGTAACCCGGATGACCACAGTGGTCCTTACAATGGTATAACCATGGGCTGT
TAA
Gene >Agabi119p4|001830
ATGTTGACTTCCCGTACCTTCCTTGCGGTCGCGTTGGCTGTTCTTTCTGTCGGCGCTAGTCCGATCCAGCTTTCG
AAACGACAGAGCATTACGGCCCTCACTTCTGCTCAAATCAATGCGTTTACGGCCTTCACTCATTTCGCCAGCACA
GCGTATTGCCAACCGAGTACTACTAGCTCATGGACATGTGGAGGTACTGTATTTCCCAAGTCTCCCAGGACAACT
CACTGACATTCTTATCATTTCTTACTATCAGCCAACTGTAATGCCAATTCTGATTTCATCCCAACGGCATCAGGT
GGCAATGGAGGATCTGTACAGTTCTGTTGGTCTTTCCTGAACATTCTGGTGTAATTCAGTTTCTAAATAATTGTC
CCAGGGTATGTTGGGTTCTCACCTTCTCAGGGATCAGTGATTGTGGGGCATCAAGGAACTGATACCAGCGAAATG
TGAGTTGGAGTCTATCGAAAGCAACGTGCATAATTAACAAGTAAACTCTTTTTCTTGAAAATAGTGAGGCGCTTC
TTACAGATGCTCAAGCCATCCAAAAGAATCTTGACTCTGGACTTTTCCCCGGAGTTCCTTCCTCAGTTGAAGTGC
ACGGCGGTTTTGCTAACGCCCAGGCTGAGCAAGTTCATTTTACACTATTTTCAAAGCGAAATCGCTAACCGCTAG
TCAAACCAGCACTGCATCGGCTGTTCTATCAGCTGTACGAACCACGATCTCTCGACATGGTGCATCGAGAGTTAC
AATTGTTGGTCACTCTCTGGGTTGTGCTATCGCTATGCTAGATGGCATATACCTTCCCCTTCACATCAGTGGTGT
GACGTTCCGTACTATCGGTTATGGTTGTCCCAGGGTGAGGAAAACGTCATTTCTTCCCAAGGGCTTAATGAGCTA
TATTCATATTCTATTTTTAGGTTGGTAACGCAGAATTCGCCAACTATGTCGACTCTCACAGCGATTTTACGCACA
TCAATAATAAAAAGGACATTGTTCCTATTCTTCCTGGTACGTGCGCTCGTATTGCTTTCGAATATACTCGAGCTG
ACCTTCCTCGTAGGCCGATTCTTGGGCTATGCTCATGCTGCTGGTGAAGTTCACATTTCAGAAAATAACCAATGG
CTCTCTTGTCCCGGCCACGACAACACCAGCTCGCAGTGCATCGTCGGTGATGTCCCAAACATCTTTGAGGGTAAC
CCGGATGACCACAGTGGTCCTTACAATGGTATAACCATGGGCTGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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