Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|001690
Gene name
Locationscaffold_01a:466738..467539
Strand-
Gene length (bp)801
Transcript length (bp)534
Coding sequence length (bp)534
Protein length (aa) 178

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 5 24 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|001690
MARAFFSSVLVFLFAVVCAVPTQIDTRQLNPADIINALGIGLVSKIHTIITLESLTTKLVSIDFDVKNPLPIELT
IKEISSSAGLNGTVYARFNHTFPAPGLVVPLLGTKNSGRIDNVLLPLGAVASLEIIPVGFLDLLDTDAKINAATI
FGHLGIPLELEGLKQEEVPATYDLSIS*
Coding >Agabi119p4|001690
ATGGCTCGCGCATTCTTCTCTAGTGTCCTCGTATTTCTGTTTGCTGTTGTCTGTGCTGTGCCCACACAGATAGAT
ACCAGGCAGCTCAACCCCGCCGATATTATAAATGCACTTGGTATTGGACTTGTTAGCAAAATCCATACCATCATC
ACTCTCGAAAGTCTCACTACCAAACTCGTCAGCATCGATTTTGATGTCAAGAATCCACTTCCAATCGAATTGACT
ATCAAAGAAATCAGCAGCTCTGCGGGGTTAAATGGCACAGTATATGCAAGGTTCAACCATACATTCCCAGCACCA
GGCCTTGTCGTACCCCTTTTGGGTACTAAGAACTCGGGGAGGATCGATAATGTTCTCCTTCCTCTAGGCGCGGTA
GCTTCCCTCGAAATAATTCCTGTGGGATTTTTAGACCTTTTGGATACAGATGCTAAAATCAATGCTGCGACTATC
TTTGGCCACCTCGGAATTCCTCTTGAGTTGGAGGGTTTGAAGCAAGAGGAAGTTCCTGCGACTTACGACCTTTCG
ATTTCCTAA
Transcript >Agabi119p4|001690
ATGGCTCGCGCATTCTTCTCTAGTGTCCTCGTATTTCTGTTTGCTGTTGTCTGTGCTGTGCCCACACAGATAGAT
ACCAGGCAGCTCAACCCCGCCGATATTATAAATGCACTTGGTATTGGACTTGTTAGCAAAATCCATACCATCATC
ACTCTCGAAAGTCTCACTACCAAACTCGTCAGCATCGATTTTGATGTCAAGAATCCACTTCCAATCGAATTGACT
ATCAAAGAAATCAGCAGCTCTGCGGGGTTAAATGGCACAGTATATGCAAGGTTCAACCATACATTCCCAGCACCA
GGCCTTGTCGTACCCCTTTTGGGTACTAAGAACTCGGGGAGGATCGATAATGTTCTCCTTCCTCTAGGCGCGGTA
GCTTCCCTCGAAATAATTCCTGTGGGATTTTTAGACCTTTTGGATACAGATGCTAAAATCAATGCTGCGACTATC
TTTGGCCACCTCGGAATTCCTCTTGAGTTGGAGGGTTTGAAGCAAGAGGAAGTTCCTGCGACTTACGACCTTTCG
ATTTCCTAA
Gene >Agabi119p4|001690
ATGGCTCGCGCATTCTTCTCTAGTGTCCTCGTATTTCTGTTTGCTGTTGTCTGTGCTGTGCCCACACAGATAGAT
ACCAGGCAGCTCAACCCCGCCGATATTATAAATGCACTTGGTATTGGACTTGTTAGCAAAATCCATACCATCATC
ACTGTATGTACATTTTGATTATCACTGTGCAAGGATCCTCACTTCGTGTTAGCTCGAAAGTCTCACTACCAAACT
CGTCAGGTAAAGTCCCCTTTCCTTCAATCGAGTCAATATCTGACGTCTTTGATTCGTTTGTATAGCATCGATTTT
GATGGTAGGTTATTAACAGATTCAGCCATTCGTGTCTTATGAATAATATCTCCTTACAGTCAAGAATCCACTTCC
AATCGAATTGACTATCAAAGAAATCAGCAGCTCTGCGGGGTTAAATGGCACAGTATATGCAAGGTTCAACCATAC
ATTCCCAGCACCAGGCCTTGTCGTACCCCTTTTGGGTACTAAGAACTCGGGGAGGATCGATAATGTTCTCCTTCC
TCTAGGCGCGGTAGCTTCCCTCGAAATAATTCCTGTGGGATTTTTAGACCTTTTGGATACAGATGCTAAAATCAA
GTGAGTTATCGTATATCGTCCACTTATTTTGTTTTATTTTGCGCTTCTTTTAAGTGCTGCGACTATCTTTGGCCA
CCTCGGAATTCCTCTTGAGTTGGAGGGTTTGAAGCAAGAGGAAGTTCCTGCGACGTGAGCATGAAACTTGATGTC
CTTTATACGTCATGACTGATAAACATTAGTTACGACCTTTCGATTTCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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