Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|001350
Gene name
Locationscaffold_01a:359356..360805
Strand+
Gene length (bp)1449
Transcript length (bp)1230
Coding sequence length (bp)1230
Protein length (aa) 410

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09451 ATG27 Autophagy-related protein 27 1.8E-09 69 243
PF00878 CIMR Cation-independent mannose-6-phosphate receptor repeat 3.0E-05 125 173

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005537 mannose binding Yes
GO:0038023 signaling receptor activity Yes
GO:0007041 lysosomal transport Yes
GO:0046907 intracellular transport No
GO:0048029 monosaccharide binding No
GO:0036094 small molecule binding No
GO:0060089 molecular transducer activity No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0051649 establishment of localization in cell No
GO:0005488 binding No
GO:0051641 cellular localization No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0007034 vacuolar transport No
GO:0051179 localization No
GO:0030246 carbohydrate binding No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 184 206 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|001350
MRIVQHLPLLALAGVVLADDKPCTAYADGKYYDLNNLKGRPDSELKTPGGHDLKFNVCQGVTTELYGLKEDIKAE
NVAGFVRKGHGDFAIGQVKTTLSVVESRPRLVFSDGSNCKASPDGASLGMKASTIVEFICDTSVFGAGKPRLVGQ
LPPGDDEVGCSYFIEWKTNFACPTSAGGGGFWGFLGMLAIVTLILLMTYTALGTLYNRYVLQLRGFDQIPQFSVE
SMKYHAREATDWIKDILAAYNTGGNGGYVPGRSAAANPFSHQSQANEELNINNNFVRPQATTIRSQPDTNPVSHH
TQSQAETQSTHNSPPPLPPKRSLPQIAPRRVALGSRGPTKEEQDFLLGEEEEEEGQELEDKPSSKSSVPPPLPTN
VDASARGSSSTLNRGDANVAAIRGRDSGEDSLRL*
Coding >Agabi119p4|001350
ATGCGCATCGTGCAGCATCTACCCCTCCTCGCCCTTGCCGGCGTAGTTCTTGCCGACGACAAGCCATGCACAGCC
TACGCTGACGGGAAATACTACGACCTCAACAATCTCAAAGGACGGCCGGACTCTGAACTCAAGACCCCAGGCGGA
CACGATCTCAAGTTCAACGTCTGCCAGGGCGTAACTACTGAGCTTTATGGTCTCAAGGAGGATATCAAAGCAGAA
AATGTCGCTGGTTTCGTCCGTAAAGGTCATGGAGACTTTGCGATTGGTCAGGTCAAAACCACACTCTCAGTCGTG
GAATCTAGGCCCCGCCTTGTATTTTCTGATGGATCAAATTGCAAGGCGTCCCCAGACGGAGCCAGCCTCGGCATG
AAAGCTTCTACTATCGTCGAATTTATCTGTGATACCTCTGTGTTCGGCGCGGGGAAGCCCCGTCTCGTAGGTCAA
CTACCCCCTGGAGACGATGAAGTTGGCTGCTCCTACTTCATTGAGTGGAAGACCAACTTTGCATGTCCGACGTCC
GCAGGCGGCGGCGGATTTTGGGGTTTTCTCGGCATGTTAGCCATTGTAACACTCATCCTCCTCATGACTTATACC
GCGTTGGGCACGTTGTATAATCGATATGTCCTACAACTTCGTGGCTTTGATCAAATACCTCAATTCTCTGTTGAG
AGCATGAAGTACCATGCACGCGAGGCTACAGATTGGATAAAAGATATCCTGGCTGCATATAACACCGGTGGAAAC
GGAGGTTATGTTCCTGGAAGATCTGCGGCAGCCAACCCTTTCAGCCATCAATCTCAAGCAAACGAAGAACTCAAC
ATCAATAATAACTTTGTTCGTCCCCAGGCAACTACTATCCGTTCACAACCCGATACCAATCCTGTATCCCACCAT
ACTCAATCACAAGCCGAGACACAGTCAACGCATAACTCGCCCCCACCTTTACCCCCCAAGCGATCACTTCCTCAA
ATTGCACCTCGGCGTGTAGCACTGGGCAGCCGAGGGCCAACAAAAGAGGAACAGGACTTCTTACTTGGAGAAGAG
GAAGAAGAGGAAGGCCAGGAATTAGAAGACAAACCCAGTTCAAAGTCTTCTGTCCCACCACCACTGCCAACTAAT
GTTGATGCCTCGGCTCGTGGCTCTTCCAGCACATTGAATCGCGGAGACGCTAATGTAGCGGCTATTCGTGGTCGA
GATAGCGGCGAGGATTCGCTGCGGCTATGA
Transcript >Agabi119p4|001350
ATGCGCATCGTGCAGCATCTACCCCTCCTCGCCCTTGCCGGCGTAGTTCTTGCCGACGACAAGCCATGCACAGCC
TACGCTGACGGGAAATACTACGACCTCAACAATCTCAAAGGACGGCCGGACTCTGAACTCAAGACCCCAGGCGGA
CACGATCTCAAGTTCAACGTCTGCCAGGGCGTAACTACTGAGCTTTATGGTCTCAAGGAGGATATCAAAGCAGAA
AATGTCGCTGGTTTCGTCCGTAAAGGTCATGGAGACTTTGCGATTGGTCAGGTCAAAACCACACTCTCAGTCGTG
GAATCTAGGCCCCGCCTTGTATTTTCTGATGGATCAAATTGCAAGGCGTCCCCAGACGGAGCCAGCCTCGGCATG
AAAGCTTCTACTATCGTCGAATTTATCTGTGATACCTCTGTGTTCGGCGCGGGGAAGCCCCGTCTCGTAGGTCAA
CTACCCCCTGGAGACGATGAAGTTGGCTGCTCCTACTTCATTGAGTGGAAGACCAACTTTGCATGTCCGACGTCC
GCAGGCGGCGGCGGATTTTGGGGTTTTCTCGGCATGTTAGCCATTGTAACACTCATCCTCCTCATGACTTATACC
GCGTTGGGCACGTTGTATAATCGATATGTCCTACAACTTCGTGGCTTTGATCAAATACCTCAATTCTCTGTTGAG
AGCATGAAGTACCATGCACGCGAGGCTACAGATTGGATAAAAGATATCCTGGCTGCATATAACACCGGTGGAAAC
GGAGGTTATGTTCCTGGAAGATCTGCGGCAGCCAACCCTTTCAGCCATCAATCTCAAGCAAACGAAGAACTCAAC
ATCAATAATAACTTTGTTCGTCCCCAGGCAACTACTATCCGTTCACAACCCGATACCAATCCTGTATCCCACCAT
ACTCAATCACAAGCCGAGACACAGTCAACGCATAACTCGCCCCCACCTTTACCCCCCAAGCGATCACTTCCTCAA
ATTGCACCTCGGCGTGTAGCACTGGGCAGCCGAGGGCCAACAAAAGAGGAACAGGACTTCTTACTTGGAGAAGAG
GAAGAAGAGGAAGGCCAGGAATTAGAAGACAAACCCAGTTCAAAGTCTTCTGTCCCACCACCACTGCCAACTAAT
GTTGATGCCTCGGCTCGTGGCTCTTCCAGCACATTGAATCGCGGAGACGCTAATGTAGCGGCTATTCGTGGTCGA
GATAGCGGCGAGGATTCGCTGCGGCTATGA
Gene >Agabi119p4|001350
ATGCGCATCGTGCAGCATCTACCCCTCCTCGCCCTTGCCGGCGTAGTTCTTGCCGACGACAAGCCATGCACAGCC
TACGCTGACGGGAAATACTACGACCTCAACAATCTCAAAGGACGGTGAGGCGTCGTCGAGTGGTCGTCTGCATCG
TCTCTAAACAACTGTGTTGTCCAGGCCGGACTCTGAACTCAAGACCCCAGGCGGACACGATCTCAAGTTCAACGT
CTGCCAGGGCGTAACTACTGAGCTTTATGGTCTCAAGGAGGATATCAAAGCAGAAAATGTCGCTGGTTTCGTCCG
TAAAGGTCATGGAGACTTTGCGATTGGGTGGGTGCTGCGCATTGCCGACATCACCGCGAACTAAGCATCCGGCTA
ATAGTCAGGTCAAAACCACACTCTCAGTCGTGGAATCTAGGCCCCGCCTTGTATTTTCTGATGGATCAAATTGCA
AGGCGTCCCCAGACGGAGCCAGCCTCGGCATGAAAGCTTCTACTATCGTCGAATTTATCTGTGATACCTCTGTGT
TCGGCGCGGGGAAGCCCCGTCTCGTAGGTCAACTACCCCCTGGAGACGATGAAGTTGGCTGCTCCTACTTCATTG
AGTGGAAGACCAACGTAAGGCAGGCTTTCCTCCGGTACCAAACATGTTTCGCCTAACGGTCTGATAGTTTGCATG
TCCGACGTCCGCAGGCGGCGGCGGATTTTGGGGTTTTCTCGGCATGTTAGCCATTGTGTACACCACATTTCTTAC
TTTTCACTGTTTGTGACTTCATGCTGACCCGCTGCCCCTAGAACACTCATCCTCCTCATGACTTATACCGCGTTG
GGCACGTTGTATAATCGATATGTCCTACAACTTCGTGGCTTTGATCAAATACCTCAATTCTCTGTTGAGAGCATG
AAGTACCATGCACGCGAGGCTACAGATTGGATAAAAGATATCCTGGCTGCATATAACACCGGTGGAAACGGAGGT
TATGTTCCTGGAAGATCTGCGGCAGCCAACCCTTTCAGCCATCAATCTCAAGCAAACGAAGAACTCAACATCAAT
AATAACTTTGTTCGTCCCCAGGCAACTACTATCCGTTCACAACCCGATACCAATCCTGTATCCCACCATACTCAA
TCACAAGCCGAGACACAGTCAACGCATAACTCGCCCCCACCTTTACCCCCCAAGCGATCACTTCCTCAAATTGCA
CCTCGGCGTGTAGCACTGGGCAGCCGAGGGCCAACAAAAGAGGAACAGGACTTCTTACTTGGAGAAGAGGAAGAA
GAGGAAGGCCAGGAATTAGAAGACAAACCCAGTTCAAAGTCTTCTGTCCCACCACCACTGCCAACTAATGTTGAT
GCCTCGGCTCGTGGCTCTTCCAGCACATTGAATCGCGGAGACGCTAATGTAGCGGCTATTCGTGGTCGAGATAGC
GGCGAGGATTCGCTGCGGCTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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