Fungal Genomics

General Properties

Protein ID	Agabi119p4|000490
Gene name
Location	scaffold_01a:114432..115142
Strand	-
Gene length (bp)	710
Transcript length (bp)	411
Coding sequence length (bp)	411
Protein length (aa)	137

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01929	Ribosomal_L14e	Ribosomal protein L14	1.7E-31	49	124
PF00467	KOW	KOW motif	1.1E-05	12	42

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0005840	ribosome	Yes
GO:0006412	translation	Yes
GO:0003735	structural constituent of ribosome	Yes
GO:0009059	macromolecule biosynthetic process	No
GO:0009058	biosynthetic process	No
GO:0043226	organelle	No
GO:0019538	protein metabolic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0044238	primary metabolic process	No
GO:1901576	organic substance biosynthetic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0008152	metabolic process	No
GO:0043228	non-membrane-bounded organelle	No
GO:0003674	molecular_function	No
GO:0005575	cellular_component	No
GO:0043229	intracellular organelle	No
GO:0009987	cellular process	No
GO:0071704	organic substance metabolic process	No
GO:0043043	peptide biosynthetic process	No
GO:0034645	cellular macromolecule biosynthetic process	No
GO:0044237	cellular metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0006518	peptide metabolic process	No
GO:0043604	amide biosynthetic process	No
GO:0110165	cellular anatomical entity	No
GO:0043603	cellular amide metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0008150	biological_process	No
GO:0043232	intracellular non-membrane-bounded organelle	No
GO:0005198	structural molecule activity	No
GO:1901566	organonitrogen compound biosynthetic process	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	937
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|000490
Agaricus bisporus var bisporus H97	AgabiH97|000490
Agaricus bisporus var burnettii H119p4	Agabi119p4|000490 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|000490 MPESNFKRFVEVGRVVLVNDGPLAGKIAVIAEIIDHNRAIIDGPTSGIPRQAFPYKHLLLTPLKLTKLPRAAGTG IVRKLVEQEGIVEKWDKSAWAQKRVMKEKRRSLSDFGRFKVMLAKKQRRDVVRKAVKKASA*
Coding	>Agabi119p4|000490 ATGCCAGAATCAAATTTCAAGCGCTTCGTCGAGGTTGGTCGAGTTGTCCTCGTGAACGACGGTCCTCTTGCGGGA AAAATTGCCGTCATTGCAGAGATTATCGACCACAATAGGGCAATCATCGATGGTCCTACGAGTGGTATTCCCCGC CAAGCCTTCCCCTACAAACACCTTCTTCTCACCCCTCTCAAACTCACAAAACTTCCCCGTGCTGCAGGAACTGGA ATTGTAAGAAAATTAGTGGAACAGGAGGGTATTGTAGAGAAGTGGGACAAGTCTGCGTGGGCGCAAAAACGGGTG ATGAAGGAGAAGCGGAGGTCACTGAGTGACTTTGGCCGATTCAAAGTCATGCTGGCGAAGAAACAGAGACGGGAT GTCGTCAGAAAAGCCGTCAAGAAGGCATCAGCCTAA
Transcript	>Agabi119p4|000490 ATGCCAGAATCAAATTTCAAGCGCTTCGTCGAGGTTGGTCGAGTTGTCCTCGTGAACGACGGTCCTCTTGCGGGA AAAATTGCCGTCATTGCAGAGATTATCGACCACAATAGGGCAATCATCGATGGTCCTACGAGTGGTATTCCCCGC CAAGCCTTCCCCTACAAACACCTTCTTCTCACCCCTCTCAAACTCACAAAACTTCCCCGTGCTGCAGGAACTGGA ATTGTAAGAAAATTAGTGGAACAGGAGGGTATTGTAGAGAAGTGGGACAAGTCTGCGTGGGCGCAAAAACGGGTG ATGAAGGAGAAGCGGAGGTCACTGAGTGACTTTGGCCGATTCAAAGTCATGCTGGCGAAGAAACAGAGACGGGAT GTCGTCAGAAAAGCCGTCAAGAAGGCATCAGCCTAA
Gene	>Agabi119p4|000490 ATGCCAGTACGTTCGGAATTTCTGTTCAGACGGTGACTAGGTCGCATGCAGCTACGCACAGTTGGGAATTTGGGC AAAAATCAGTTGGATGAGAGTTTGGGTCATCAGATGACGGGTTTGGCTTATCGCTGAGCTGCATGCGACCTAAAC AATATCGGAAGGCATCTTTGAATTGACAAAGGTTTATCTTGTCTCTAGGAATCAAATTTCAAGCGCTTCGTCGAG GTTGGTCGAGGTGTGTATAGTCAAGTCTTCGAGGCATGCCAGATTTTAGCTGACGACGCTTCGTAGTTGTCCTCG TGAACGACGGTCCTCTTGCGGGAAAAATTGCCGTCATTGCAGAGATTATCGACCACAATAGGGTGAGTTAAATCT ACATCATTATCGTTGGGATAGAAGTTTACATTCACTAGGCAATCATCGATGGTCCTACGAGTGGTATTCCCCGCC AAGCCTTCCCCTACAAACACCTTCTTCTCACCCCTCTCAAACTCACAAAACTTCCCCGTGCTGCAGGAACTGGAA TTGTAAGAAAATTAGTGGAACAGGAGGGTATTGTAGAGAAGTGGGACAAGTCTGCGTGGGCGCAAAAACGGGTGA TGAAGGAGAAGCGGAGGTCACTGAGTGACTTTGGCCGATTCAAAGTCATGCTGGCGAAGAAACAGAGACGGGATG TCGTCAGAAAAGCCGTCAAGAAGGCATCAGCCTAA