Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF17921
Short nameIntegrase_H2C2
Long nameIntegrase zinc binding domain
Proteins with at least one of this domain141
Total domain count141
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Agabi119p4|034050 PF17921 Integrase_H2C2 Integrase zinc binding domain 5.8E-09 149 198
Agabi119p4|554250 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-22 1438 1599
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.6E-21 1663 1764
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.3E-27 1692 1794
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-16 1996 2052
Agabi119p4|557750 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.2E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|557900 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.2E-10 1094 1143
Agabi119p4|558000 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.7E-38 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.6E-39 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-19 377 433
PF00665 rve Integrase core domain 7.1E-12 451 547
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.7E-10 747 796
Agabi119p4|563200 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-08 371 469
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.7E-10 400 503
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.9E-17 717 769
Agabi119p4|563300 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
Agabi119p4|564500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|565000 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-13 1 54
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-20 168 226
Agabi119p4|565500 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.5E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 2.7E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|565950 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.2E-19 27 83
PF00665 rve Integrase core domain 3.0E-12 101 197
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.6E-10 397 446
Agabi119p4|567000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-15 302 389
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 452 552
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.9E-34 478 583
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-20 697 755
Agabi119p4|568200 PF13650 Asp_protease_2 Aspartyl protease 5.6E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.7E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.8E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.1E-18 724 780
PF00665 rve Integrase core domain 9.9E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|568450 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.5E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.5E-09 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-19 165 221
PF00665 rve Integrase core domain 3.3E-12 239 335
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 5.3E-08 535 575
Agabi119p4|569400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-20 146 308
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-20 374 477
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.9E-27 405 507
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.8E-14 642 693
Agabi119p4|572800 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.8E-08 479 578
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-10 508 611
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.4E-18 828 881
Agabi119p4|584700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.7E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|584850 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-08 839 938
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-08 868 970
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-16 1193 1248
Agabi119p4|589900 PF13650 Asp_protease_2 Aspartyl protease 6.5E-06 531 614
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-05 533 632
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-19 851 1013
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.0E-16 1079 1167
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.5E-29 1097 1197
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-17 1320 1374
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-08 1705 1753
Agabi119p4|607700 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.8E-08 479 578
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-10 508 611
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.4E-18 828 881
Agabi119p4|608500 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-20 1 68
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.4E-21 182 240
PF00665 rve Integrase core domain 5.9E-08 256 353
Agabi119p4|608600 PF13650 Asp_protease_2 Aspartyl protease 2.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.7E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-19 704 760
PF00665 rve Integrase core domain 3.2E-12 777 874
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 5.7E-09 1074 1123
Agabi119p4|608800 PF13650 Asp_protease_2 Aspartyl protease 2.0E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.1E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.2E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-19 704 760
PF00665 rve Integrase core domain 9.2E-12 777 874
Agabi119p4|611850 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-17 2 92
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-27 20 122
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-19 324 378
Agabi119p4|616550 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-22 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-29 674 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.6E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.8E-12 919 966
Agabi119p4|616900 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.7E-38 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-37 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.6E-20 377 433
Agabi119p4|620900 PF08284 RVP_2 Retroviral aspartyl protease 1.1E-05 575 675
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.6E-06 578 663
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-26 853 1012
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.8E-36 1075 1172
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.5E-36 1100 1206
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-18 1326 1381
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.8E-07 1702 1750
Agabi119p4|625650 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.0E-35 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-27 448 535
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-18 620 676
Agabi119p4|628050 PF16297 DUF4939 Domain of unknown function (DUF4939) 1.4E-07 172 265
PF19259 Ty3_capsid Ty3 transposon capsid-like protein 2.2E-11 174 346
PF03732 Retrotrans_gag Retrotransposon gag protein 5.7E-08 221 318
PF08284 RVP_2 Retroviral aspartyl protease 2.1E-05 536 633
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-30 798 958
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.9E-27 1022 1117
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-27 1047 1152
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.1E-15 1273 1323
Agabi119p4|628400 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-19 377 433
PF00665 rve Integrase core domain 5.8E-12 451 547
Agabi119p4|637350 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.9E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-09 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.8E-19 186 242
PF00665 rve Integrase core domain 1.2E-11 260 356
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.7E-09 556 605
Agabi119p4|637700 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.6E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-09 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.2E-19 186 242
PF00665 rve Integrase core domain 7.0E-12 260 356
Agabi119p4|637900 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-20 1 68
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.8E-20 182 240
Agabi119p4|638500 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.8E-08 479 578
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-10 508 611
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.4E-18 828 881
Agabi119p4|640350 PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 2 97
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.0E-19 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 445 541
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 473 575
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-19 689 745
PF00665 rve Integrase core domain 1.1E-11 763 859
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.4E-09 1059 1108
Agabi119p4|641750 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.9E-37 115 211
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-38 143 245
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.8E-18 359 415
Agabi119p4|642000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-15 1010 1068
Agabi119p4|643250 PF03732 Retrotrans_gag Retrotransposon gag protein 6.6E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.7E-05 322 337
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-19 568 727
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 793 889
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.8E-38 821 923
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.9E-19 1037 1093
PF00665 rve Integrase core domain 1.6E-09 1111 1207
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-09 1407 1456
Agabi119p4|645750 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-08 789 887
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-10 818 921
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.5E-17 1135 1187
Agabi119p4|647700 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.0E-07 1284 1382
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.9E-10 1313 1416
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.1E-16 1633 1682
Agabi119p4|647850 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-08 839 938
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-08 868 970
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-16 1193 1248
Agabi119p4|649550 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.2E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.3E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|654250 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.2E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-19 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|656050 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-16 133 188
Agabi119p4|656250 PF13650 Asp_protease_2 Aspartyl protease 2.2E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.5E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.2E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-19 724 780
PF00665 rve Integrase core domain 1.0E-11 798 894
Agabi119p4|658350 PF08284 RVP_2 Retroviral aspartyl protease 2.2E-05 123 223
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.1E-22 440 601
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.8E-21 667 770
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.1E-29 699 800
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-17 931 986
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-08 1317 1364
Agabi119p4|664550 PF16297 DUF4939 Domain of unknown function (DUF4939) 6.0E-08 166 258
PF19259 Ty3_capsid Ty3 transposon capsid-like protein 7.5E-12 167 335
PF03732 Retrotrans_gag Retrotransposon gag protein 1.4E-09 214 310
PF08284 RVP_2 Retroviral aspartyl protease 4.2E-05 529 627
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-30 791 951
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.5E-30 1015 1110
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.0E-34 1040 1145
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.1E-16 1266 1322
Agabi119p4|667400 PF00098 zf-CCHC Zinc knuckle 1.7E-05 261 276
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.1E-22 789 950
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.2E-26 995 1093
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.2E-31 1019 1124
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.5E-19 1238 1296
Agabi119p4|667450 PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-14 111 166
Agabi119p4|667550 PF08284 RVP_2 Retroviral aspartyl protease 4.3E-09 2 97
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.8E-19 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 445 541
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 473 575
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.9E-19 689 745
PF00665 rve Integrase core domain 1.1E-11 763 859
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.6E-10 1059 1108
Agabi119p4|669150 PF13650 Asp_protease_2 Aspartyl protease 3.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.6E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 6.8E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.3E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|670400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.9E-22 803 964
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.9E-24 1030 1133
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.2E-30 1062 1163
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.9E-15 1296 1351
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.1E-06 1674 1721
Agabi119p4|671850 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.9E-08 839 938
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-07 868 970
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-16 1193 1248
Agabi119p4|672000 PF13650 Asp_protease_2 Aspartyl protease 1.9E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.8E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.0E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.3E-19 724 780
PF00665 rve Integrase core domain 5.0E-12 797 894
Agabi119p4|672700 PF17921 Integrase_H2C2 Integrase zinc binding domain 3.3E-20 80 136
Agabi119p4|672900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.2E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|674100 PF13650 Asp_protease_2 Aspartyl protease 2.2E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.8E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.2E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-19 724 780
PF00665 rve Integrase core domain 3.8E-12 798 894
Agabi119p4|675100 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-11 1042 1140
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.1E-08 1074 1172
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.8E-15 1339 1390
Agabi119p4|677600 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-08 327 425
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.6E-09 356 459
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.8E-16 673 725
Agabi119p4|685450 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.1E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|687950 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|689150 PF17921 Integrase_H2C2 Integrase zinc binding domain 5.7E-19 119 175
PF00665 rve Integrase core domain 7.8E-13 192 289
Agabi119p4|689200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.3E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.2E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|692900 PF13650 Asp_protease_2 Aspartyl protease 5.0E-07 684 773
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.4E-08 685 771
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.5E-08 1307 1405
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.3E-10 1336 1439
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.9E-17 1653 1705
Agabi119p4|694750 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.3E-15 5 90
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.9E-31 154 254
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.1E-34 180 285
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.9E-20 399 457
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.6E-13 771 820
Agabi119p4|694900 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.5E-19 119 175
PF00665 rve Integrase core domain 4.0E-12 193 289
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.9E-10 489 538
Agabi119p4|695150 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-09 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.1E-20 186 242
PF00665 rve Integrase core domain 1.2E-11 260 354
Agabi119p4|696300 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.9E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.4E-37 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|696400 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.9E-18 186 239
Agabi119p4|701300 PF13650 Asp_protease_2 Aspartyl protease 5.9E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.8E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.6E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.4E-19 724 780
PF00665 rve Integrase core domain 4.4E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-07 1094 1134
Agabi119p4|704250 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-08 839 938
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-08 868 970
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-16 1193 1248
Agabi119p4|708000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.7E-24 745 905
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.3E-30 969 1069
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.5E-34 995 1100
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 1214 1272
Agabi119p4|708300 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.9E-08 839 938
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-07 868 970
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-16 1193 1248
Agabi119p4|708800 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.1E-19 377 433
PF00665 rve Integrase core domain 2.5E-12 451 547
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.3E-08 747 787
Agabi119p4|709050 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-09 2 40
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-20 3 74
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.6E-19 195 249
Agabi119p4|709250 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.1E-24 82 243
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.8E-31 306 406
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.7E-34 332 437
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.5E-20 548 606
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.1E-13 920 969
Agabi119p4|714500 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.4E-08 1265 1363
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.1E-10 1294 1397
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.7E-17 1611 1663
Agabi119p4|715450 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.8E-08 479 578
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-10 508 611
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.4E-18 828 881
Agabi119p4|716800 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-20 67 125
Agabi119p4|717100 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-31 12 101
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-37 33 135
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.3E-16 229 284
PF00665 rve Integrase core domain 1.2E-13 302 398
Agabi119p4|717400 PF13650 Asp_protease_2 Aspartyl protease 5.7E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.7E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 2.1E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.1E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|717700 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-08 213 311
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.2E-10 242 345
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.1E-17 559 611
Agabi119p4|718550 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-21 2 69
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.9E-08 2 35
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.3E-19 183 239
Agabi119p4|719400 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 119 175
PF00665 rve Integrase core domain 6.3E-12 197 289
Agabi119p4|720800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-15 1010 1068
Agabi119p4|721200 PF08284 RVP_2 Retroviral aspartyl protease 5.0E-05 507 603
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.8E-28 767 927
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.6E-30 991 1086
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-32 1016 1121
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.4E-17 1242 1298
Agabi119p4|723650 PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-19 80 136
Agabi119p4|723850 PF17921 Integrase_H2C2 Integrase zinc binding domain 3.9E-19 80 136
PF00665 rve Integrase core domain 1.7E-12 154 250
Agabi119p4|724150 PF17921 Integrase_H2C2 Integrase zinc binding domain 3.9E-19 80 136
PF00665 rve Integrase core domain 1.7E-12 154 250
Agabi119p4|724500 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-20 1 68
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-19 182 240
Agabi119p4|724850 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.5E-19 103 161
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 475 524
Agabi119p4|725200 PF13650 Asp_protease_2 Aspartyl protease 2.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.4E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 8.2E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|725300 PF03732 Retrotrans_gag Retrotransposon gag protein 6.3E-07 57 127
PF00098 zf-CCHC Zinc knuckle 3.6E-04 235 250
PF13650 Asp_protease_2 Aspartyl protease 2.8E-07 293 383
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 9.0E-08 294 385
PF08284 RVP_2 Retroviral aspartyl protease 9.0E-10 301 400
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.7E-18 523 682
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.0E-37 748 844
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.0E-37 776 878
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-18 992 1048
PF00665 rve Integrase core domain 5.4E-12 1066 1162
Agabi119p4|725400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.4E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-19 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.7E-13 1291 1340
Agabi119p4|725650 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.1E-19 103 161
Agabi119p4|725700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-19 78 237
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 303 399
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.9E-38 331 433
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.2E-19 547 603
PF00665 rve Integrase core domain 6.5E-08 621 702
Agabi119p4|725800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.6E-19 78 237
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 303 399
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 331 433
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.8E-19 547 603
Agabi119p4|726050 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.1E-19 377 433
Agabi119p4|729900 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.4E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|731500 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.4E-38 115 211
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-38 143 245
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 359 415
PF00665 rve Integrase core domain 5.4E-12 433 529
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.7E-10 729 778
Agabi119p4|731750 PF13650 Asp_protease_2 Aspartyl protease 1.2E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.9E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 2.2E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-28 477 557
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.9E-30 489 575
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.4E-19 655 711
PF00665 rve Integrase core domain 9.6E-12 729 825
Agabi119p4|732300 PF17921 Integrase_H2C2 Integrase zinc binding domain 4.5E-18 80 136
PF00665 rve Integrase core domain 1.9E-11 154 250
Agabi119p4|733600 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.8E-08 139 238
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.5E-10 168 271
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-18 488 541
Agabi119p4|735400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.8E-18 3 125
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.7E-31 188 288
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.4E-34 214 319
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.9E-20 433 491
Agabi119p4|740850 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|740950 PF13650 Asp_protease_2 Aspartyl protease 8.8E-07 25 114
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.7E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.4E-08 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.1E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|741150 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
Agabi119p4|743350 PF13650 Asp_protease_2 Aspartyl protease 7.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.8E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 3.4E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-16 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.8E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 4.2E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.3E-10 1094 1144
Agabi119p4|743650 PF13650 Asp_protease_2 Aspartyl protease 7.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.8E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 3.4E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.5E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.1E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|744800 PF17921 Integrase_H2C2 Integrase zinc binding domain 5.9E-20 27 83
PF00665 rve Integrase core domain 7.0E-12 101 197
Agabi119p4|748300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.0E-22 826 987
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.6E-24 1053 1156
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.5E-30 1085 1186
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.0E-15 1319 1374
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.1E-06 1697 1744
Agabi119p4|748850 PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-09 236 273
Agabi119p4|749300 PF00098 zf-CCHC Zinc knuckle 1.7E-05 262 277
PF08284 RVP_2 Retroviral aspartyl protease 2.5E-04 331 431
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-15 824 912
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.4E-30 975 1075
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.5E-34 1001 1106
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.3E-20 1220 1278
Agabi119p4|752250 PF13650 Asp_protease_2 Aspartyl protease 4.0E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.8E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 3.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.9E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.6E-18 724 780
PF00665 rve Integrase core domain 4.4E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.3E-08 1094 1134
Agabi119p4|756950 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-18 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
Agabi119p4|758450 PF13650 Asp_protease_2 Aspartyl protease 5.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 4.5E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 3.2E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.1E-19 704 760
PF00665 rve Integrase core domain 1.2E-11 778 874
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-07 1074 1114
Agabi119p4|758750 PF00098 zf-CCHC Zinc knuckle 2.1E-04 280 294
PF08284 RVP_2 Retroviral aspartyl protease 8.6E-05 373 473
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-24 832 993
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 1056 1156
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-33 1082 1187
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-20 1301 1359
Agabi119p4|760800 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.5E-17 91 146
Agabi119p4|760950 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-19 73 232
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-37 298 394
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-38 326 428
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-18 542 598
PF00665 rve Integrase core domain 1.2E-11 616 712
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.6E-10 912 961
Agabi119p4|762350 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.8E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-19 377 433
PF00665 rve Integrase core domain 7.1E-12 451 547
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.6E-10 747 796
Agabi119p4|762650 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.0E-08 347 446
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.2E-10 376 479
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.6E-18 699 750
Agabi119p4|762800 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-20 103 161
Agabi119p4|763100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-09 516 589
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-30 652 752
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.3E-34 678 783
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.5E-20 897 955
Agabi119p4|763150 PF13650 Asp_protease_2 Aspartyl protease 5.0E-07 684 773
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.4E-08 685 771
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.5E-08 1307 1405
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.3E-10 1336 1439
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.9E-17 1653 1705
Agabi119p4|763200 PF13650 Asp_protease_2 Aspartyl protease 5.0E-07 684 773
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.4E-08 685 771
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.5E-08 1307 1405
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.3E-10 1336 1439
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.9E-17 1653 1705
Agabi119p4|763650 PF13650 Asp_protease_2 Aspartyl protease 3.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.6E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 6.8E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|764450 PF13650 Asp_protease_2 Aspartyl protease 2.6E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.9E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.0E-19 724 780
PF00665 rve Integrase core domain 4.4E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-07 1094 1134
Agabi119p4|766200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.4E-13 1291 1340
Agabi119p4|769750 PF08284 RVP_2 Retroviral aspartyl protease 4.1E-09 2 97
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.8E-19 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 414 510
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 442 544
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.9E-19 658 714
PF00665 rve Integrase core domain 1.1E-11 732 828
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.9E-10 1028 1077
Agabi119p4|769900 PF13650 Asp_protease_2 Aspartyl protease 2.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.1E-37 461 557
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 489 591
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.1E-19 705 761
PF00665 rve Integrase core domain 1.0E-12 779 875
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.6E-09 1075 1124
Agabi119p4|770050 PF13650 Asp_protease_2 Aspartyl protease 2.6E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.8E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.4E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-17 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-37 461 557
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 489 591
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.6E-19 705 761
PF00665 rve Integrase core domain 5.8E-12 779 875
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-07 1075 1115
Agabi119p4|771000 PF17921 Integrase_H2C2 Integrase zinc binding domain 8.0E-17 103 161
Agabi119p4|772400 PF08284 RVP_2 Retroviral aspartyl protease 2.3E-08 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.4E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-37 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 9.1E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.8E-10 1094 1143
Agabi119p4|773050 PF13650 Asp_protease_2 Aspartyl protease 1.8E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.9E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 7.0E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.9E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 724 780
PF00665 rve Integrase core domain 7.3E-12 798 894
Agabi119p4|773750 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.3E-09 95 222
PF13976 gag_pre-integrs GAG-pre-integrase domain 7.6E-13 514 588
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.1E-52 989 1229
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.5E-24 2025 2186
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.5E-30 2249 2349
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-33 2275 2380
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-19 2494 2552
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-12 2866 2915
Agabi119p4|773850 PF13650 Asp_protease_2 Aspartyl protease 1.4E-07 3 90
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.5E-08 3 91
PF08284 RVP_2 Retroviral aspartyl protease 7.0E-05 9 110
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.1E-19 229 388
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.1E-28 452 531
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-37 463 565
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.5E-18 679 735
Agabi119p4|777900 PF00270 DEAD DEAD/DEAH box helicase 1.2E-20 188 470
PF08284 RVP_2 Retroviral aspartyl protease 1.6E-04 1252 1345
PF13650 Asp_protease_2 Aspartyl protease 7.3E-07 1252 1334
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 9.6E-08 1252 1337
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-22 1521 1682
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.4E-20 1748 1851
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-28 1781 1881
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.1E-13 2017 2067
Agabi119p4|780100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.8E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.7E-20 919 977
Agabi119p4|780250 PF08284 RVP_2 Retroviral aspartyl protease 6.0E-07 433 542
PF13650 Asp_protease_2 Aspartyl protease 6.0E-06 434 525
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-19 714 876
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.3E-25 942 1045
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-31 974 1075
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.6E-14 1200 1255
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.6E-07 1586 1633
Agabi119p4|785250 PF17921 Integrase_H2C2 Integrase zinc binding domain 2.0E-12 103 149
Agabi119p4|786400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.4E-23 82 242
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.5E-31 306 406
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.8E-34 332 437
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.7E-20 551 609
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.1E-13 923 972

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