Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF13976
Short namegag_pre-integrs
Long nameGAG-pre-integrase domain
Proteins with at least one of this domain102
Total domain count102
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Agabi119p4|556250 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.8E-11 95 220
PF13976 gag_pre-integrs GAG-pre-integrase domain 2.8E-12 514 584
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-49 971 1211
Agabi119p4|564650 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.2E-08 180 223
PF00665 rve Integrase core domain 5.0E-11 238 335
Agabi119p4|565750 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.2E-10 285 352
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 6.1E-64 791 1034
Agabi119p4|566600 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.7E-10 285 352
PF00665 rve Integrase core domain 6.2E-08 366 466
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.7E-64 758 1001
Agabi119p4|566800 PF13976 gag_pre-integrs GAG-pre-integrase domain 9.7E-11 285 352
Agabi119p4|569350 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-08 1008 1058
PF00665 rve Integrase core domain 2.2E-12 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-44 1592 1714
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.9E-09 1719 1801
Agabi119p4|570700 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.2E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 5.4E-08 1009 1058
PF00665 rve Integrase core domain 2.8E-13 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-65 1592 1823
Agabi119p4|577300 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.7E-11 77 180
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.3E-13 470 540
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 7.8E-35 905 1046
Agabi119p4|581300 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.1E-10 285 352
Agabi119p4|581700 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.7E-11 36 103
Agabi119p4|581950 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-10 281 348
Agabi119p4|582050 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.1E-10 285 352
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-40 791 928
Agabi119p4|582250 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.9E-11 285 352
Agabi119p4|584600 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-69 1167 1404
Agabi119p4|592800 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.3E-08 352 402
PF00665 rve Integrase core domain 1.5E-13 416 513
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-65 917 1148
Agabi119p4|593700 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.5E-07 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.6E-08 1008 1058
PF00665 rve Integrase core domain 2.6E-13 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-65 1592 1823
Agabi119p4|595950 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 5.9E-12 94 216
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.2E-13 459 529
Agabi119p4|598850 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 7.2E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-67 1167 1404
Agabi119p4|599750 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 5.2E-07 92 213
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.9E-13 512 585
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.4E-48 976 1218
Agabi119p4|605100 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.2E-10 285 352
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.7E-64 790 1033
Agabi119p4|605300 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.2E-08 81 188
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-08 1008 1058
PF00665 rve Integrase core domain 2.5E-13 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-65 1592 1823
Agabi119p4|607150 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.8E-10 324 391
Agabi119p4|607450 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.1E-10 267 334
Agabi119p4|613400 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 5.0E-13 96 209
PF13976 gag_pre-integrs GAG-pre-integrase domain 5.8E-07 475 519
PF00665 rve Integrase core domain 1.9E-13 534 630
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.6E-67 910 1155
Agabi119p4|616100 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-11 549 618
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.4E-48 948 1182
Agabi119p4|617200 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.0E-08 775 825
PF00665 rve Integrase core domain 6.5E-13 839 936
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-63 1359 1590
Agabi119p4|619850 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.2E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-08 1008 1058
PF00665 rve Integrase core domain 2.5E-13 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 6.1E-65 1592 1823
Agabi119p4|619950 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.6E-11 876 945
Agabi119p4|620600 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 5.3E-11 95 221
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.7E-12 463 536
Agabi119p4|620650 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.2E-08 81 188
PF13976 gag_pre-integrs GAG-pre-integrase domain 4.0E-08 1008 1058
PF00665 rve Integrase core domain 7.1E-14 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.5E-65 1592 1823
Agabi119p4|620800 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-69 1167 1404
Agabi119p4|625800 PF13976 gag_pre-integrs GAG-pre-integrase domain 6.8E-10 217 284
Agabi119p4|626200 PF13976 gag_pre-integrs GAG-pre-integrase domain 8.6E-11 285 352
Agabi119p4|626450 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.8E-10 282 349
PF00665 rve Integrase core domain 2.5E-08 363 463
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 7.7E-64 787 1030
Agabi119p4|637050 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.1E-08 77 120
PF00665 rve Integrase core domain 1.3E-10 136 232
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-64 630 862
Agabi119p4|639550 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.2E-09 88 207
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.2E-13 513 583
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.1E-51 967 1207
Agabi119p4|642500 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 3.7E-08 78 197
PF13976 gag_pre-integrs GAG-pre-integrase domain 7.6E-09 1006 1056
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-53 1544 1756
Agabi119p4|643950 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.1E-10 285 351
Agabi119p4|644000 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.2E-08 44 151
PF13976 gag_pre-integrs GAG-pre-integrase domain 4.7E-08 971 1021
PF00665 rve Integrase core domain 2.4E-13 1035 1132
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.5E-65 1555 1786
Agabi119p4|644300 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.9E-10 285 352
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-64 790 1033
Agabi119p4|644400 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 4.7E-10 45 180
PF13976 gag_pre-integrs GAG-pre-integrase domain 4.7E-10 410 477
Agabi119p4|644500 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.0E-10 285 352
Agabi119p4|644900 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.7E-10 271 337
Agabi119p4|645800 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.7E-10 281 348
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 7.1E-41 786 931
Agabi119p4|656400 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.6E-10 95 222
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-13 514 588
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-52 989 1229
Agabi119p4|659600 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.1E-11 94 218
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-12 463 535
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-48 915 1155
Agabi119p4|664600 PF13976 gag_pre-integrs GAG-pre-integrase domain 5.1E-10 106 173
Agabi119p4|664900 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.4E-08 256 323
Agabi119p4|665500 PF13976 gag_pre-integrs GAG-pre-integrase domain 9.1E-10 283 340
PF00665 rve Integrase core domain 6.2E-08 355 455
Agabi119p4|669400 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 5.8E-10 93 219
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.1E-10 491 564
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 7.5E-52 956 1197
Agabi119p4|671650 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 4.2E-12 36 162
PF13976 gag_pre-integrs GAG-pre-integrase domain 6.9E-08 721 764
PF00665 rve Integrase core domain 2.0E-10 780 876
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-64 1279 1510
Agabi119p4|675400 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.7E-09 122 180
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-40 575 731
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-28 762 1001
Agabi119p4|675750 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.0E-10 285 352
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-63 790 1033
Agabi119p4|675800 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.0E-10 285 352
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-42 442 617
Agabi119p4|675850 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.8E-10 106 173
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-64 612 855
Agabi119p4|675900 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-10 96 163
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-63 601 844
Agabi119p4|676100 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 7.3E-12 62 201
PF13976 gag_pre-integrs GAG-pre-integrase domain 4.0E-10 431 498
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-46 937 1109
Agabi119p4|676900 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.9E-10 285 352
Agabi119p4|683400 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 3.8E-11 69 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 9.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-69 1167 1404
Agabi119p4|683800 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.9E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-08 963 1013
PF00665 rve Integrase core domain 5.0E-13 1027 1124
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.4E-65 1528 1759
Agabi119p4|685550 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 5.2E-12 71 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.2E-08 589 638
PF00665 rve Integrase core domain 7.3E-14 651 749
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-69 1166 1403
Agabi119p4|686450 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.4E-11 11 136
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.4E-11 433 503
Agabi119p4|690200 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.4E-10 285 352
Agabi119p4|690250 PF13976 gag_pre-integrs GAG-pre-integrase domain 7.7E-10 285 352
PF00665 rve Integrase core domain 6.4E-08 366 466
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 6.3E-64 790 1033
Agabi119p4|691300 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.8E-10 285 352
PF00665 rve Integrase core domain 6.4E-08 366 466
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.5E-64 790 1033
Agabi119p4|691350 PF13976 gag_pre-integrs GAG-pre-integrase domain 8.7E-11 106 173
PF00665 rve Integrase core domain 3.4E-08 187 287
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-48 611 790
Agabi119p4|692050 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.1E-10 281 348
Agabi119p4|698050 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.0E-09 91 215
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.6E-09 499 572
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-50 970 1211
Agabi119p4|707800 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-69 1167 1404
Agabi119p4|707850 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.6E-13 96 209
PF13976 gag_pre-integrs GAG-pre-integrase domain 4.9E-07 475 519
PF00665 rve Integrase core domain 5.6E-12 534 630
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-67 909 1154
Agabi119p4|708100 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.2E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-08 1009 1059
PF00665 rve Integrase core domain 2.5E-13 1073 1170
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.3E-65 1593 1824
Agabi119p4|708450 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.8E-07 7 101
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-08 917 967
PF00665 rve Integrase core domain 2.4E-13 981 1078
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-65 1501 1732
Agabi119p4|710650 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 7.6E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 7.3E-08 590 639
PF00665 rve Integrase core domain 6.5E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-68 1167 1404
Agabi119p4|711450 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-69 1167 1404
Agabi119p4|719100 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.3E-08 413 463
PF00665 rve Integrase core domain 5.8E-12 477 574
Agabi119p4|719750 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.2E-08 120 187
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-64 625 868
Agabi119p4|719800 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.2E-08 120 187
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.4E-64 625 868
Agabi119p4|719850 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.0E-11 62 201
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.4E-09 431 498
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-64 933 1176
Agabi119p4|719950 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.0E-11 62 201
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.4E-09 431 498
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-64 933 1176
Agabi119p4|720150 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.1E-09 285 352
Agabi119p4|734300 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.4E-10 281 348
PF00665 rve Integrase core domain 1.7E-08 362 462
Agabi119p4|734900 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.8E-07 157 201
PF00665 rve Integrase core domain 3.1E-08 217 312
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.6E-42 682 809
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-13 815 897
Agabi119p4|742800 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.6E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.2E-08 590 639
PF00665 rve Integrase core domain 7.3E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-52 1186 1383
Agabi119p4|754100 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.0E-07 67 119
Agabi119p4|755200 PF13976 gag_pre-integrs GAG-pre-integrase domain 8.2E-10 217 284
Agabi119p4|755500 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.3E-10 264 331
Agabi119p4|755650 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.1E-07 106 158
Agabi119p4|755900 PF13976 gag_pre-integrs GAG-pre-integrase domain 5.8E-11 208 275
Agabi119p4|756700 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.3E-10 368 434
Agabi119p4|758250 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.7E-07 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-69 1167 1404
Agabi119p4|758600 PF13976 gag_pre-integrs GAG-pre-integrase domain 7.4E-08 435 484
PF00665 rve Integrase core domain 6.6E-14 497 595
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-69 1012 1249
Agabi119p4|762200 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.2E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-08 1009 1059
PF00665 rve Integrase core domain 6.6E-13 1073 1170
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-65 1593 1824
Agabi119p4|768000 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.1E-08 44 151
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.9E-08 972 1022
PF00665 rve Integrase core domain 1.3E-13 1036 1133
Agabi119p4|770200 PF13976 gag_pre-integrs GAG-pre-integrase domain 9.5E-09 395 438
Agabi119p4|770850 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.9E-08 180 223
PF00665 rve Integrase core domain 8.4E-10 239 335
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-42 717 837
Agabi119p4|771200 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.2E-10 285 352
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-62 791 1034
Agabi119p4|771450 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.4E-10 57 124
Agabi119p4|773200 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.0E-10 235 302
Agabi119p4|773750 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.3E-09 95 222
PF13976 gag_pre-integrs GAG-pre-integrase domain 7.6E-13 514 588
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.1E-52 989 1229
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.5E-24 2025 2186
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.5E-30 2249 2349
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-33 2275 2380
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-19 2494 2552
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-12 2866 2915
Agabi119p4|785500 PF13976 gag_pre-integrs GAG-pre-integrase domain 7.7E-09 41 98
Agabi119p4|786250 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.6E-10 98 165
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.7E-63 603 846
Agabi119p4|786600 PF13976 gag_pre-integrs GAG-pre-integrase domain 8.2E-11 285 352

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail