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| PFAM domain | PF07727 |
| Short name | RVT_2 |
| Long name | Reverse transcriptase (RNA-dependent DNA polymerase) |
| Proteins with at least one of this domain | 146 |
| Total domain count | 149 |
| More information | PFAM website |
| Short name | Long name | E-value | Start | End | Name | ||
|---|---|---|---|---|---|---|---|
| protein ID | PFAM | ||||||
| Agabi119p4|556250 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 1.8E-11 | 95 | 220 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 2.8E-12 | 514 | 584 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.7E-49 | 971 | 1211 | ||
| Agabi119p4|564600 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 9.4E-65 | 346 | 578 | |
| Agabi119p4|565350 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.0E-28 | 4 | 123 | |
| Agabi119p4|565700 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.7E-28 | 110 | 245 | |
| Agabi119p4|565750 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.2E-10 | 285 | 352 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 6.1E-64 | 791 | 1034 | ||
| Agabi119p4|566300 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.0E-54 | 59 | 264 | |
| Agabi119p4|566600 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.7E-10 | 285 | 352 | |
| PF00665 | rve | Integrase core domain | 6.2E-08 | 366 | 466 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.7E-64 | 758 | 1001 | ||
| Agabi119p4|569350 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.4E-08 | 1008 | 1058 | |
| PF00665 | rve | Integrase core domain | 2.2E-12 | 1072 | 1169 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.7E-44 | 1592 | 1714 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.9E-09 | 1719 | 1801 | ||
| Agabi119p4|570700 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 9.2E-08 | 78 | 193 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 5.4E-08 | 1009 | 1058 | ||
| PF00665 | rve | Integrase core domain | 2.8E-13 | 1072 | 1169 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.1E-65 | 1592 | 1823 | ||
| Agabi119p4|577300 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 2.7E-11 | 77 | 180 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.3E-13 | 470 | 540 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.8E-35 | 905 | 1046 | ||
| Agabi119p4|581900 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.7E-08 | 7 | 64 | |
| Agabi119p4|582000 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.1E-65 | 87 | 330 | |
| Agabi119p4|582050 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.1E-10 | 285 | 352 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.2E-40 | 791 | 928 | ||
| Agabi119p4|582850 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-49 | 15 | 200 | |
| Agabi119p4|584600 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 8.8E-11 | 72 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 8.3E-08 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 7.4E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.1E-69 | 1167 | 1404 | ||
| Agabi119p4|592800 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 2.3E-08 | 352 | 402 | |
| PF00665 | rve | Integrase core domain | 1.5E-13 | 416 | 513 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-65 | 917 | 1148 | ||
| Agabi119p4|593700 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 2.5E-07 | 78 | 193 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.6E-08 | 1008 | 1058 | ||
| PF00665 | rve | Integrase core domain | 2.6E-13 | 1072 | 1169 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.1E-65 | 1592 | 1823 | ||
| Agabi119p4|598850 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 8.8E-11 | 72 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 7.2E-08 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 7.4E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.2E-67 | 1167 | 1404 | ||
| Agabi119p4|599750 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 5.2E-07 | 92 | 213 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.9E-13 | 512 | 585 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.4E-48 | 976 | 1218 | ||
| Agabi119p4|604450 | PF00665 | rve | Integrase core domain | 1.7E-14 | 142 | 238 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.1E-64 | 520 | 766 | ||
| Agabi119p4|605100 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.2E-10 | 285 | 352 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.7E-64 | 790 | 1033 | ||
| Agabi119p4|605300 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 2.2E-08 | 81 | 188 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.5E-08 | 1008 | 1058 | ||
| PF00665 | rve | Integrase core domain | 2.5E-13 | 1072 | 1169 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.1E-65 | 1592 | 1823 | ||
| Agabi119p4|605550 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.1E-38 | 3 | 166 | |
| Agabi119p4|605950 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-08 | 7 | 64 | |
| Agabi119p4|606650 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.6E-28 | 2 | 133 | |
| Agabi119p4|606750 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.6E-28 | 23 | 127 | |
| Agabi119p4|607400 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.3E-61 | 14 | 243 | |
| Agabi119p4|607850 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.4E-64 | 181 | 424 | |
| Agabi119p4|613400 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 5.0E-13 | 96 | 209 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 5.8E-07 | 475 | 519 | ||
| PF00665 | rve | Integrase core domain | 1.9E-13 | 534 | 630 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.6E-67 | 910 | 1155 | ||
| Agabi119p4|616100 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.5E-11 | 549 | 618 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.4E-48 | 948 | 1182 | ||
| Agabi119p4|617200 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.0E-08 | 775 | 825 | |
| PF00665 | rve | Integrase core domain | 6.5E-13 | 839 | 936 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.2E-63 | 1359 | 1590 | ||
| Agabi119p4|619850 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 9.2E-08 | 78 | 193 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.5E-08 | 1008 | 1058 | ||
| PF00665 | rve | Integrase core domain | 2.5E-13 | 1072 | 1169 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 6.1E-65 | 1592 | 1823 | ||
| Agabi119p4|620650 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 2.2E-08 | 81 | 188 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.0E-08 | 1008 | 1058 | ||
| PF00665 | rve | Integrase core domain | 7.1E-14 | 1072 | 1169 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.5E-65 | 1592 | 1823 | ||
| Agabi119p4|620700 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.6E-52 | 270 | 511 | |
| Agabi119p4|620800 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 8.8E-11 | 72 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 8.3E-08 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 7.4E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-69 | 1167 | 1404 | ||
| Agabi119p4|626050 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 9.3E-09 | 6 | 64 | |
| Agabi119p4|626300 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.0E-64 | 348 | 591 | |
| Agabi119p4|626400 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 9.3E-50 | 214 | 392 | |
| Agabi119p4|626450 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.8E-10 | 282 | 349 | |
| PF00665 | rve | Integrase core domain | 2.5E-08 | 363 | 463 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.7E-64 | 787 | 1030 | ||
| Agabi119p4|626600 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.9E-43 | 2 | 158 | |
| Agabi119p4|627000 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-08 | 6 | 64 | |
| Agabi119p4|627650 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-08 | 6 | 64 | |
| Agabi119p4|637050 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.1E-08 | 77 | 120 | |
| PF00665 | rve | Integrase core domain | 1.3E-10 | 136 | 232 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.2E-64 | 630 | 862 | ||
| Agabi119p4|639550 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 1.2E-09 | 88 | 207 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.2E-13 | 513 | 583 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.1E-51 | 967 | 1207 | ||
| Agabi119p4|642500 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 3.7E-08 | 78 | 197 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 7.6E-09 | 1006 | 1056 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.8E-53 | 1544 | 1756 | ||
| Agabi119p4|642600 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.3E-41 | 3 | 165 | |
| Agabi119p4|642700 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8E-09 | 218 | 274 | |
| Agabi119p4|644000 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 2.2E-08 | 44 | 151 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.7E-08 | 971 | 1021 | ||
| PF00665 | rve | Integrase core domain | 2.4E-13 | 1035 | 1132 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.5E-65 | 1555 | 1786 | ||
| Agabi119p4|644050 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.7E-49 | 313 | 492 | |
| Agabi119p4|644100 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-09 | 6 | 64 | |
| Agabi119p4|644250 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.0E-64 | 23 | 266 | |
| Agabi119p4|644300 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.9E-10 | 285 | 352 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8E-64 | 790 | 1033 | ||
| Agabi119p4|644450 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.1E-62 | 2 | 238 | |
| Agabi119p4|644750 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.9E-10 | 138 | 194 | |
| Agabi119p4|644850 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.9E-40 | 3 | 166 | |
| Agabi119p4|645050 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.9E-65 | 23 | 266 | |
| Agabi119p4|645550 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 5.1E-64 | 61 | 304 | |
| Agabi119p4|645800 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 2.7E-10 | 281 | 348 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.1E-41 | 786 | 931 | ||
| Agabi119p4|645950 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-08 | 7 | 64 | |
| Agabi119p4|656400 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 1.6E-10 | 95 | 222 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.4E-13 | 514 | 588 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.9E-52 | 989 | 1229 | ||
| Agabi119p4|659600 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 1.1E-11 | 94 | 218 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.4E-12 | 463 | 535 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8E-48 | 915 | 1155 | ||
| Agabi119p4|665050 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.3E-43 | 159 | 312 | |
| Agabi119p4|665250 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.2E-13 | 3 | 86 | |
| Agabi119p4|665650 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.6E-40 | 2 | 148 | |
| Agabi119p4|665850 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.1E-63 | 376 | 619 | |
| Agabi119p4|666250 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.4E-64 | 440 | 683 | |
| Agabi119p4|666450 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.3E-15 | 27 | 114 | |
| Agabi119p4|666600 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.5E-56 | 287 | 493 | |
| Agabi119p4|669400 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 5.8E-10 | 93 | 219 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.1E-10 | 491 | 564 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.5E-52 | 956 | 1197 | ||
| Agabi119p4|671650 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 4.2E-12 | 36 | 162 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 6.9E-08 | 721 | 764 | ||
| PF00665 | rve | Integrase core domain | 2.0E-10 | 780 | 876 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.9E-64 | 1279 | 1510 | ||
| Agabi119p4|675400 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.7E-09 | 122 | 180 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.9E-40 | 575 | 731 | ||
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.6E-28 | 762 | 1001 | ||
| Agabi119p4|675750 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.0E-10 | 285 | 352 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.2E-63 | 790 | 1033 | ||
| Agabi119p4|675800 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 2.0E-10 | 285 | 352 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.0E-42 | 442 | 617 | ||
| Agabi119p4|675850 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 2.8E-10 | 106 | 173 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.3E-64 | 612 | 855 | ||
| Agabi119p4|675900 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.5E-10 | 96 | 163 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.3E-63 | 601 | 844 | ||
| Agabi119p4|675950 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.7E-63 | 415 | 658 | |
| Agabi119p4|676050 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.3E-10 | 24 | 95 | |
| Agabi119p4|676100 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 7.3E-12 | 62 | 201 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.0E-10 | 431 | 498 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-46 | 937 | 1109 | ||
| Agabi119p4|676250 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.0E-29 | 2 | 133 | |
| Agabi119p4|676350 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.4E-64 | 274 | 517 | |
| Agabi119p4|676450 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.0E-08 | 6 | 64 | |
| Agabi119p4|676750 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.4E-40 | 2 | 153 | |
| Agabi119p4|683400 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 3.8E-11 | 69 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 9.3E-08 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 7.4E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-69 | 1167 | 1404 | ||
| Agabi119p4|683800 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 8.9E-08 | 78 | 193 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.4E-08 | 963 | 1013 | ||
| PF00665 | rve | Integrase core domain | 5.0E-13 | 1027 | 1124 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.4E-65 | 1528 | 1759 | ||
| Agabi119p4|685550 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 5.2E-12 | 71 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 8.2E-08 | 589 | 638 | ||
| PF00665 | rve | Integrase core domain | 7.3E-14 | 651 | 749 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.7E-69 | 1166 | 1403 | ||
| Agabi119p4|686500 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.5E-49 | 352 | 592 | |
| Agabi119p4|689500 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.3E-63 | 87 | 330 | |
| Agabi119p4|690100 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.1E-29 | 2 | 133 | |
| Agabi119p4|690150 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.1E-29 | 120 | 227 | |
| Agabi119p4|690250 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 7.7E-10 | 285 | 352 | |
| PF00665 | rve | Integrase core domain | 6.4E-08 | 366 | 466 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 6.3E-64 | 790 | 1033 | ||
| Agabi119p4|690300 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.5E-64 | 278 | 521 | |
| Agabi119p4|690400 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8E-40 | 2 | 153 | |
| Agabi119p4|690500 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-08 | 7 | 64 | |
| Agabi119p4|690800 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.8E-64 | 465 | 708 | |
| Agabi119p4|691100 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.7E-41 | 1 | 166 | |
| Agabi119p4|691300 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.8E-10 | 285 | 352 | |
| PF00665 | rve | Integrase core domain | 6.4E-08 | 366 | 466 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.5E-64 | 790 | 1033 | ||
| Agabi119p4|691350 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 8.7E-11 | 106 | 173 | |
| PF00665 | rve | Integrase core domain | 3.4E-08 | 187 | 287 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.1E-48 | 611 | 790 | ||
| Agabi119p4|691950 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 5.4E-58 | 87 | 312 | |
| Agabi119p4|692150 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.8E-62 | 308 | 551 | |
| Agabi119p4|698050 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 9.0E-09 | 91 | 215 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.6E-09 | 499 | 572 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-50 | 970 | 1211 | ||
| Agabi119p4|707800 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 8.8E-11 | 72 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 8.3E-08 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 7.4E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.3E-69 | 1167 | 1404 | ||
| Agabi119p4|707850 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 2.6E-13 | 96 | 209 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.9E-07 | 475 | 519 | ||
| PF00665 | rve | Integrase core domain | 5.6E-12 | 534 | 630 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.5E-67 | 909 | 1154 | ||
| Agabi119p4|708100 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 9.2E-08 | 78 | 193 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.5E-08 | 1009 | 1059 | ||
| PF00665 | rve | Integrase core domain | 2.5E-13 | 1073 | 1170 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.3E-65 | 1593 | 1824 | ||
| Agabi119p4|708150 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.1E-18 | 1 | 146 | |
| Agabi119p4|708200 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-16 | 166 | 232 | |
| Agabi119p4|708450 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 9.8E-07 | 7 | 101 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.4E-08 | 917 | 967 | ||
| PF00665 | rve | Integrase core domain | 2.4E-13 | 981 | 1078 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-65 | 1501 | 1732 | ||
| Agabi119p4|710650 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 7.6E-11 | 72 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 7.3E-08 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 6.5E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-68 | 1167 | 1404 | ||
| Agabi119p4|711450 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 8.8E-11 | 72 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 8.3E-08 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 7.4E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-69 | 1167 | 1404 | ||
| Agabi119p4|716450 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.1E-32 | 3 | 132 | |
| Agabi119p4|717250 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4E-50 | 428 | 619 | |
| Agabi119p4|718300 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.2E-49 | 158 | 332 | |
| Agabi119p4|719050 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.5E-65 | 325 | 557 | |
| Agabi119p4|719750 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.2E-08 | 120 | 187 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8E-64 | 625 | 868 | ||
| Agabi119p4|719800 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.2E-08 | 120 | 187 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.4E-64 | 625 | 868 | ||
| Agabi119p4|719850 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 1.0E-11 | 62 | 201 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.4E-09 | 431 | 498 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.5E-64 | 933 | 1176 | ||
| Agabi119p4|719950 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 1.0E-11 | 62 | 201 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.4E-09 | 431 | 498 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.5E-64 | 933 | 1176 | ||
| Agabi119p4|720300 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.3E-13 | 122 | 187 | |
| Agabi119p4|720400 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.6E-39 | 3 | 166 | |
| Agabi119p4|720550 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.4E-17 | 121 | 212 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.8E-10 | 229 | 319 | ||
| Agabi119p4|733250 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.3E-28 | 2 | 133 | |
| Agabi119p4|733900 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 6.1E-65 | 102 | 345 | |
| Agabi119p4|734550 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 6.0E-65 | 93 | 336 | |
| Agabi119p4|734900 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 4.8E-07 | 157 | 201 | |
| PF00665 | rve | Integrase core domain | 3.1E-08 | 217 | 312 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.6E-42 | 682 | 809 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.5E-13 | 815 | 897 | ||
| Agabi119p4|742800 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 8.6E-11 | 72 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 8.2E-08 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 7.3E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.5E-52 | 1186 | 1383 | ||
| Agabi119p4|742850 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.3E-43 | 42 | 168 | |
| Agabi119p4|754650 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.0E-49 | 313 | 537 | |
| Agabi119p4|755300 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.1E-25 | 3 | 100 | |
| Agabi119p4|755750 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.4E-63 | 378 | 620 | |
| Agabi119p4|758250 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 8.8E-11 | 72 | 199 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 1.7E-07 | 590 | 639 | ||
| PF00665 | rve | Integrase core domain | 7.4E-14 | 652 | 750 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.8E-69 | 1167 | 1404 | ||
| Agabi119p4|758600 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 7.4E-08 | 435 | 484 | |
| PF00665 | rve | Integrase core domain | 6.6E-14 | 497 | 595 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-69 | 1012 | 1249 | ||
| Agabi119p4|762200 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 9.2E-08 | 78 | 193 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.5E-08 | 1009 | 1059 | ||
| PF00665 | rve | Integrase core domain | 6.6E-13 | 1073 | 1170 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.0E-65 | 1593 | 1824 | ||
| Agabi119p4|767900 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.1E-65 | 21 | 253 | |
| Agabi119p4|770300 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8E-56 | 49 | 262 | |
| Agabi119p4|770850 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 2.9E-08 | 180 | 223 | |
| PF00665 | rve | Integrase core domain | 8.4E-10 | 239 | 335 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-42 | 717 | 837 | ||
| Agabi119p4|771200 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 3.2E-10 | 285 | 352 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.1E-62 | 791 | 1034 | ||
| Agabi119p4|771250 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.9E-30 | 2 | 133 | |
| Agabi119p4|771500 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 9.4E-40 | 3 | 166 | |
| Agabi119p4|771650 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.3E-41 | 90 | 227 | |
| Agabi119p4|772200 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 7.2E-25 | 247 | 347 | |
| Agabi119p4|772500 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 5.2E-39 | 3 | 166 | |
| Agabi119p4|773150 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.5E-56 | 208 | 426 | |
| Agabi119p4|773750 | PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | 1.3E-09 | 95 | 222 | |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 7.6E-13 | 514 | 588 | ||
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 8.1E-52 | 989 | 1229 | ||
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.5E-24 | 2025 | 2186 | ||
| PF17919 | RT_RNaseH_2 | RNase H-like domain found in reverse transcriptase | 5.5E-30 | 2249 | 2349 | ||
| PF17917 | RT_RNaseH | RNase H-like domain found in reverse transcriptase | 1.8E-33 | 2275 | 2380 | ||
| PF17921 | Integrase_H2C2 | Integrase zinc binding domain | 2.4E-19 | 2494 | 2552 | ||
| PF00385 | Chromo | Chromo (CHRromatin Organisation MOdifier) domain | 1.0E-12 | 2866 | 2915 | ||
| Agabi119p4|785600 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 9.9E-61 | 114 | 348 | |
| Agabi119p4|786250 | PF13976 | gag_pre-integrs | GAG-pre-integrase domain | 2.6E-10 | 98 | 165 | |
| PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.7E-63 | 603 | 846 | ||
| Agabi119p4|786950 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1.2E-63 | 1199 | 1442 | |
| Agabi119p4|788000 | PF07727 | RVT_2 | Reverse transcriptase (RNA-dependent DNA polymerase) | 3.3E-15 | 3 | 92 |