Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF04997
Short nameRNA_pol_Rpb1_1
Long nameRNA polymerase Rpb1, domain 1
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Agabi119p4|012220 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.8E-111 14 352
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 1.1E-73 354 516
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 2.4E-52 521 680
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 2.7E-36 706 811
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 2.1E-104 818 1413
PF04992 RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6 3.4E-67 884 1069
PF04990 RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7 1.9E-47 1154 1289
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.1E+01 1605 1625
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.5E-02 1619 1632
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.1E-01 1626 1639
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 4.0E-02 1633 1646
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.4E-01 1640 1653
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.3E-02 1647 1660
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.1E+00 1654 1667
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.2E-02 1661 1672
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 4.4E-02 1668 1681
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.8E-01 1682 1695
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.7E-01 1696 1709
Agabi119p4|069940 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 2.5E-23 10 227
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 2.8E-62 519 709
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 5.6E-36 713 891
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 9.9E-21 954 1042
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 1.7E-87 1049 1696
Agabi119p4|076390 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 6.0E-84 11 349
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 4.5E-72 351 516
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 2.2E-36 519 702
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 9.4E-32 731 833
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 2.5E-81 840 1334

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