Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF04851
Short nameResIII
Long nameType III restriction enzyme, res subunit
Proteins with at least one of this domain42
Total domain count43
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Agabi119p4|000020 PF04851 ResIII Type III restriction enzyme, res subunit 7.5E-09 203 362
PF00176 SNF2-rel_dom SNF2-related domain 7.9E-74 206 493
PF00271 Helicase_C Helicase conserved C-terminal domain 4.8E-17 515 628
PF09110 HAND HAND 1.9E-30 772 879
PF09111 SLIDE SLIDE 5.2E-41 937 1050
Agabi119p4|002720 PF04851 ResIII Type III restriction enzyme, res subunit 2.3E-05 850 1003
PF00176 SNF2-rel_dom SNF2-related domain 3.0E-56 852 1126
PF11496 HDA2-3 Class II histone deacetylase complex subunits 2 and 3 1.6E-16 1070 1297
PF00271 Helicase_C Helicase conserved C-terminal domain 9.9E-19 1151 1264
Agabi119p4|005360 PF17911 Ski2_N Ski2 N-terminal region 2.8E-29 61 178
PF00270 DEAD DEAD/DEAH box helicase 5.2E-18 280 428
PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-05 292 426
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-05 623 702
PF13234 rRNA_proc-arch rRNA-processing arch domain 1.5E-29 757 1033
PF08148 DSHCT DSHCT (NUC185) domain 2.9E-50 1059 1226
Agabi119p4|006000 PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-18 30 203
PF00270 DEAD DEAD/DEAH box helicase 4.0E-14 33 203
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-15 284 381
Agabi119p4|007700 PF13892 DBINO DNA-binding domain 3.4E-47 469 600
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-06 733 901
PF00176 SNF2-rel_dom SNF2-related domain 1.8E-70 751 1038
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-15 1316 1428
Agabi119p4|009090 PF00270 DEAD DEAD/DEAH box helicase 9.2E-37 81 248
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-08 96 244
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-25 288 395
Agabi119p4|009110 PF00270 DEAD DEAD/DEAH box helicase 4.6E-34 138 312
PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-06 152 306
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-23 362 458
Agabi119p4|011560 PF00270 DEAD DEAD/DEAH box helicase 1.6E-17 211 370
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-19 222 367
PF00271 Helicase_C Helicase conserved C-terminal domain 1.9E-18 578 682
Agabi119p4|011890 PF08880 QLQ QLQ 7.3E-15 117 151
PF07529 HSA HSA domain 3.1E-19 402 472
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-07 573 732
PF00176 SNF2-rel_dom SNF2-related domain 2.1E-74 576 872
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-18 896 1009
PF14619 SnAC Snf2-ATP coupling, chromatin remodelling complex 3.9E-12 1105 1174
PF00439 Bromodomain Bromodomain 1.1E-18 1302 1375
Agabi119p4|015780 PF18044 zf-CCCH_4 CCCH-type zinc finger 3.9E-07 8 27
PF13086 AAA_11 AAA domain 3.9E-12 488 556
PF13604 AAA_30 AAA domain 3.2E-14 488 676
PF04851 ResIII Type III restriction enzyme, res subunit 5.0E-05 489 633
PF13245 AAA_19 AAA domain 2.9E-12 504 664
PF13086 AAA_11 AAA domain 1.0E-11 599 670
PF13087 AAA_12 AAA domain 2.8E-46 707 894
Agabi119p4|015880 PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-05 507 688
PF13086 AAA_11 AAA domain 4.0E-12 508 591
PF13604 AAA_30 AAA domain 1.7E-10 509 703
PF13245 AAA_19 AAA domain 1.3E-08 526 691
PF13086 AAA_11 AAA domain 3.8E-11 627 697
PF13087 AAA_12 AAA domain 3.0E-41 717 913
Agabi119p4|020090 PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-14 16 190
PF00270 DEAD DEAD/DEAH box helicase 1.3E-13 18 151
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-15 382 514
PF03368 Dicer_dimer Dicer dimerisation domain 3.1E-23 588 694
PF00636 Ribonuclease_3 Ribonuclease III domain 4.2E-18 1031 1169
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 4.2E-12 1224 1296
PF00636 Ribonuclease_3 Ribonuclease III domain 1.2E-17 1246 1392
Agabi119p4|022660 PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-08 167 384
PF00176 SNF2-rel_dom SNF2-related domain 4.9E-65 170 488
PF00271 Helicase_C Helicase conserved C-terminal domain 8.2E-18 644 755
Agabi119p4|034360 PF00176 SNF2-rel_dom SNF2-related domain 3.3E-60 157 464
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-08 157 330
PF00271 Helicase_C Helicase conserved C-terminal domain 3.0E-19 746 856
Agabi119p4|042540 PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-05 148 321
PF00270 DEAD DEAD/DEAH box helicase 2.0E-39 150 374
PF00271 Helicase_C Helicase conserved C-terminal domain 7.3E-17 518 600
PF13959 DUF4217 Domain of unknown function (DUF4217) 3.7E-19 666 727
Agabi119p4|042800 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-15 298 349
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-07 403 550
PF00176 SNF2-rel_dom SNF2-related domain 5.2E-62 405 669
PF00271 Helicase_C Helicase conserved C-terminal domain 8.8E-19 696 806
PF18196 Cdh1_DBD_1 Chromodomain helicase DNA-binding domain 1 1.7E-08 1017 1095
PF13907 DUF4208 Domain of unknown function (DUF4208) 9.9E-24 1296 1390
Agabi119p4|044400 PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-11 337 510
PF00176 SNF2-rel_dom SNF2-related domain 1.7E-57 340 624
PF00270 DEAD DEAD/DEAH box helicase 5.8E-07 359 514
PF00271 Helicase_C Helicase conserved C-terminal domain 3.8E-14 689 799
Agabi119p4|046490 PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-07 562 714
PF00176 SNF2-rel_dom SNF2-related domain 5.3E-60 563 867
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-18 937 1049
Agabi119p4|049140 PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-08 937 1096
PF00176 SNF2-rel_dom SNF2-related domain 1.0E-67 941 1230
PF00271 Helicase_C Helicase conserved C-terminal domain 7.0E-16 1467 1579
Agabi119p4|052830 PF00270 DEAD DEAD/DEAH box helicase 1.5E-45 48 211
PF04851 ResIII Type III restriction enzyme, res subunit 3.9E-06 61 206
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-31 249 357
Agabi119p4|054100 PF09416 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) 4.5E-72 91 240
PF18141 UPF1_1B_dom RNA helicase UPF1, 1B domain 1.8E-35 292 383
PF13604 AAA_30 AAA domain 6.6E-14 439 638
PF04851 ResIII Type III restriction enzyme, res subunit 3.0E-05 440 515
PF13086 AAA_11 AAA domain 2.5E-20 440 549
PF13245 AAA_19 AAA domain 1.0E-11 444 636
PF13086 AAA_11 AAA domain 1.6E-30 538 642
PF13087 AAA_12 AAA domain 1.7E-57 650 845
Agabi119p4|056060 PF00270 DEAD DEAD/DEAH box helicase 8.5E-24 191 359
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-09 199 356
PF00271 Helicase_C Helicase conserved C-terminal domain 3.0E-09 425 559
PF02889 Sec63 Sec63 Brl domain 1.2E-29 678 992
Agabi119p4|059280 PF08839 CDT1 DNA replication factor CDT1 like 1.1E-06 49 109
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-06 301 473
PF00270 DEAD DEAD/DEAH box helicase 1.4E-22 303 475
PF00271 Helicase_C Helicase conserved C-terminal domain 2.5E-14 537 644
PF09369 MZB MrfA Zn-binding domain 1.1E-14 907 988
Agabi119p4|059710 PF00270 DEAD DEAD/DEAH box helicase 1.6E-44 202 382
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-05 222 377
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-25 418 525
Agabi119p4|062200 PF00270 DEAD DEAD/DEAH box helicase 2.4E-47 41 208
PF04851 ResIII Type III restriction enzyme, res subunit 8.4E-06 57 201
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-30 242 351
Agabi119p4|062230 PF04851 ResIII Type III restriction enzyme, res subunit 5.8E-15 15 180
PF00270 DEAD DEAD/DEAH box helicase 6.5E-16 18 157
PF00271 Helicase_C Helicase conserved C-terminal domain 3.8E-16 360 480
PF03368 Dicer_dimer Dicer dimerisation domain 4.0E-13 564 648
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 1.6E-09 981 1096
PF00636 Ribonuclease_3 Ribonuclease III domain 2.5E-20 983 1093
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 4.7E-15 1145 1281
PF00636 Ribonuclease_3 Ribonuclease III domain 4.1E-18 1167 1279
Agabi119p4|071510 PF00270 DEAD DEAD/DEAH box helicase 7.8E-25 270 452
PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-10 282 451
PF02889 Sec63 Sec63 Brl domain 7.6E-77 779 1081
PF00270 DEAD DEAD/DEAH box helicase 1.2E-06 1128 1268
Agabi119p4|076650 PF04851 ResIII Type III restriction enzyme, res subunit 7.1E-06 343 511
PF00176 SNF2-rel_dom SNF2-related domain 3.9E-59 348 678
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.1E-05 698 739
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-14 779 893
Agabi119p4|080920 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-05 369 522
PF13086 AAA_11 AAA domain 6.5E-13 369 445
PF13604 AAA_30 AAA domain 2.7E-15 369 559
PF13245 AAA_19 AAA domain 5.5E-11 386 557
PF13086 AAA_11 AAA domain 1.3E-09 486 556
PF13087 AAA_12 AAA domain 8.3E-31 568 732
Agabi119p4|080930 PF04851 ResIII Type III restriction enzyme, res subunit 3.9E-05 352 506
PF13086 AAA_11 AAA domain 5.4E-13 353 429
PF13604 AAA_30 AAA domain 2.5E-15 353 543
PF13245 AAA_19 AAA domain 1.9E-10 370 541
PF13086 AAA_11 AAA domain 1.9E-09 468 540
PF13087 AAA_12 AAA domain 3.5E-32 552 715
Agabi119p4|082540 PF00270 DEAD DEAD/DEAH box helicase 1.8E-50 122 293
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-05 138 286
PF00271 Helicase_C Helicase conserved C-terminal domain 4.9E-30 330 439
Agabi119p4|082880 PF00270 DEAD DEAD/DEAH box helicase 9.8E-39 195 416
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-08 206 343
PF00271 Helicase_C Helicase conserved C-terminal domain 6.2E-21 470 586
Agabi119p4|083550 PF13625 Helicase_C_3 Helicase conserved C-terminal domain 2.5E-39 115 241
PF00176 SNF2-rel_dom SNF2-related domain 8.6E-12 359 525
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-16 361 516
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 5.7E-126 542 771
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-11 588 692
Agabi119p4|088320 PF18149 Helicase_PWI N-terminal helicase PWI domain 3.2E-35 279 385
PF00270 DEAD DEAD/DEAH box helicase 7.6E-27 498 674
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-15 510 672
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-08 730 874
PF02889 Sec63 Sec63 Brl domain 6.9E-90 996 1300
PF00270 DEAD DEAD/DEAH box helicase 2.2E-21 1345 1506
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-06 1348 1472
PF02889 Sec63 Sec63 Brl domain 1.5E-65 1830 2141
Agabi119p4|094920 PF00270 DEAD DEAD/DEAH box helicase 2.1E-39 38 224
PF04851 ResIII Type III restriction enzyme, res subunit 3.8E-05 50 184
PF00271 Helicase_C Helicase conserved C-terminal domain 8.6E-28 260 468
Agabi119p4|595250 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 2.0E-08 157 258
PF00270 DEAD DEAD/DEAH box helicase 1.1E-09 1007 1158
PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-05 1016 1154
PF00271 Helicase_C Helicase conserved C-terminal domain 5.0E-09 1207 1307
Agabi119p4|595900 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 1.9E-08 84 185
PF00270 DEAD DEAD/DEAH box helicase 1.0E-09 934 1085
PF04851 ResIII Type III restriction enzyme, res subunit 3.2E-05 943 1081
PF00271 Helicase_C Helicase conserved C-terminal domain 3.1E-09 1134 1234
Agabi119p4|618150 PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-06 192 325
PF00176 SNF2-rel_dom SNF2-related domain 5.3E-31 195 324
Agabi119p4|654450 PF04851 ResIII Type III restriction enzyme, res subunit 7.0E-07 98 324
PF00176 SNF2-rel_dom SNF2-related domain 2.0E-23 118 432
PF00271 Helicase_C Helicase conserved C-terminal domain 8.3E-12 515 611
Agabi119p4|687800 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 3.6E-08 150 251
PF00270 DEAD DEAD/DEAH box helicase 9.6E-10 1000 1151
PF04851 ResIII Type III restriction enzyme, res subunit 3.0E-05 1009 1147
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-09 1200 1300
Agabi119p4|688000 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 1.6E-08 150 251
PF00270 DEAD DEAD/DEAH box helicase 8.0E-10 1000 1151
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-05 1009 1147
PF00271 Helicase_C Helicase conserved C-terminal domain 2.6E-09 1200 1300
Agabi119p4|746500 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 2.0E-08 150 251
PF00270 DEAD DEAD/DEAH box helicase 2.2E-09 1000 1151
PF04851 ResIII Type III restriction enzyme, res subunit 2.8E-05 1009 1147
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-09 1200 1300

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