Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF00665
Short namerve
Long nameIntegrase core domain
Proteins with at least one of this domain103
Total domain count103
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Agabi119p4|557900 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.2E-10 1094 1143
Agabi119p4|558000 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.7E-38 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.6E-39 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-19 377 433
PF00665 rve Integrase core domain 7.1E-12 451 547
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.7E-10 747 796
Agabi119p4|563300 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
Agabi119p4|564650 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.2E-08 180 223
PF00665 rve Integrase core domain 5.0E-11 238 335
Agabi119p4|565500 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.5E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 2.7E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|565950 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.2E-19 27 83
PF00665 rve Integrase core domain 3.0E-12 101 197
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.6E-10 397 446
Agabi119p4|566600 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.7E-10 285 352
PF00665 rve Integrase core domain 6.2E-08 366 466
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.7E-64 758 1001
Agabi119p4|568200 PF13650 Asp_protease_2 Aspartyl protease 5.6E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.7E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.8E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.1E-18 724 780
PF00665 rve Integrase core domain 9.9E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|568450 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.5E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.5E-09 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-19 165 221
PF00665 rve Integrase core domain 3.3E-12 239 335
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 5.3E-08 535 575
Agabi119p4|569350 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-08 1008 1058
PF00665 rve Integrase core domain 2.2E-12 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-44 1592 1714
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.9E-09 1719 1801
Agabi119p4|570700 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.2E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 5.4E-08 1009 1058
PF00665 rve Integrase core domain 2.8E-13 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-65 1592 1823
Agabi119p4|584600 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-69 1167 1404
Agabi119p4|592800 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.3E-08 352 402
PF00665 rve Integrase core domain 1.5E-13 416 513
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-65 917 1148
Agabi119p4|593700 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.5E-07 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.6E-08 1008 1058
PF00665 rve Integrase core domain 2.6E-13 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-65 1592 1823
Agabi119p4|598850 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 7.2E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-67 1167 1404
Agabi119p4|604450 PF00665 rve Integrase core domain 1.7E-14 142 238
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-64 520 766
Agabi119p4|605300 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.2E-08 81 188
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-08 1008 1058
PF00665 rve Integrase core domain 2.5E-13 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-65 1592 1823
Agabi119p4|608500 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-20 1 68
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.4E-21 182 240
PF00665 rve Integrase core domain 5.9E-08 256 353
Agabi119p4|608600 PF13650 Asp_protease_2 Aspartyl protease 2.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.7E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-19 704 760
PF00665 rve Integrase core domain 3.2E-12 777 874
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 5.7E-09 1074 1123
Agabi119p4|608800 PF13650 Asp_protease_2 Aspartyl protease 2.0E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.1E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.2E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-19 704 760
PF00665 rve Integrase core domain 9.2E-12 777 874
Agabi119p4|613400 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 5.0E-13 96 209
PF13976 gag_pre-integrs GAG-pre-integrase domain 5.8E-07 475 519
PF00665 rve Integrase core domain 1.9E-13 534 630
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.6E-67 910 1155
Agabi119p4|617200 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.0E-08 775 825
PF00665 rve Integrase core domain 6.5E-13 839 936
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-63 1359 1590
Agabi119p4|619850 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.2E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-08 1008 1058
PF00665 rve Integrase core domain 2.5E-13 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 6.1E-65 1592 1823
Agabi119p4|620650 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.2E-08 81 188
PF13976 gag_pre-integrs GAG-pre-integrase domain 4.0E-08 1008 1058
PF00665 rve Integrase core domain 7.1E-14 1072 1169
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.5E-65 1592 1823
Agabi119p4|620800 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-69 1167 1404
Agabi119p4|626450 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.8E-10 282 349
PF00665 rve Integrase core domain 2.5E-08 363 463
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 7.7E-64 787 1030
Agabi119p4|628400 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-19 377 433
PF00665 rve Integrase core domain 5.8E-12 451 547
Agabi119p4|637050 PF13976 gag_pre-integrs GAG-pre-integrase domain 3.1E-08 77 120
PF00665 rve Integrase core domain 1.3E-10 136 232
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-64 630 862
Agabi119p4|637350 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.9E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-09 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.8E-19 186 242
PF00665 rve Integrase core domain 1.2E-11 260 356
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.7E-09 556 605
Agabi119p4|637700 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.6E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-09 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.2E-19 186 242
PF00665 rve Integrase core domain 7.0E-12 260 356
Agabi119p4|640350 PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 2 97
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.0E-19 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 445 541
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 473 575
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-19 689 745
PF00665 rve Integrase core domain 1.1E-11 763 859
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.4E-09 1059 1108
Agabi119p4|643250 PF03732 Retrotrans_gag Retrotransposon gag protein 6.6E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.7E-05 322 337
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-19 568 727
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 793 889
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.8E-38 821 923
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.9E-19 1037 1093
PF00665 rve Integrase core domain 1.6E-09 1111 1207
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-09 1407 1456
Agabi119p4|643550 PF00665 rve Integrase core domain 1.3E-08 17 117
Agabi119p4|644000 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.2E-08 44 151
PF13976 gag_pre-integrs GAG-pre-integrase domain 4.7E-08 971 1021
PF00665 rve Integrase core domain 2.4E-13 1035 1132
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.5E-65 1555 1786
Agabi119p4|656250 PF13650 Asp_protease_2 Aspartyl protease 2.2E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.5E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.2E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-19 724 780
PF00665 rve Integrase core domain 1.0E-11 798 894
Agabi119p4|665500 PF13976 gag_pre-integrs GAG-pre-integrase domain 9.1E-10 283 340
PF00665 rve Integrase core domain 6.2E-08 355 455
Agabi119p4|666650 PF00665 rve Integrase core domain 9.6E-09 15 115
Agabi119p4|667550 PF08284 RVP_2 Retroviral aspartyl protease 4.3E-09 2 97
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.8E-19 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 445 541
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 473 575
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.9E-19 689 745
PF00665 rve Integrase core domain 1.1E-11 763 859
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.6E-10 1059 1108
Agabi119p4|669150 PF13650 Asp_protease_2 Aspartyl protease 3.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.6E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 6.8E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.3E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|671650 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 4.2E-12 36 162
PF13976 gag_pre-integrs GAG-pre-integrase domain 6.9E-08 721 764
PF00665 rve Integrase core domain 2.0E-10 780 876
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-64 1279 1510
Agabi119p4|672000 PF13650 Asp_protease_2 Aspartyl protease 1.9E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.8E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.0E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.3E-19 724 780
PF00665 rve Integrase core domain 5.0E-12 797 894
Agabi119p4|674100 PF13650 Asp_protease_2 Aspartyl protease 2.2E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.8E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.2E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-19 724 780
PF00665 rve Integrase core domain 3.8E-12 798 894
Agabi119p4|683400 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 3.8E-11 69 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 9.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-69 1167 1404
Agabi119p4|683800 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.9E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-08 963 1013
PF00665 rve Integrase core domain 5.0E-13 1027 1124
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 8.4E-65 1528 1759
Agabi119p4|685450 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.1E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|685550 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 5.2E-12 71 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.2E-08 589 638
PF00665 rve Integrase core domain 7.3E-14 651 749
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-69 1166 1403
Agabi119p4|689150 PF17921 Integrase_H2C2 Integrase zinc binding domain 5.7E-19 119 175
PF00665 rve Integrase core domain 7.8E-13 192 289
Agabi119p4|690250 PF13976 gag_pre-integrs GAG-pre-integrase domain 7.7E-10 285 352
PF00665 rve Integrase core domain 6.4E-08 366 466
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 6.3E-64 790 1033
Agabi119p4|690600 PF00665 rve Integrase core domain 4.8E-08 44 144
Agabi119p4|691300 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.8E-10 285 352
PF00665 rve Integrase core domain 6.4E-08 366 466
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 4.5E-64 790 1033
Agabi119p4|691350 PF13976 gag_pre-integrs GAG-pre-integrase domain 8.7E-11 106 173
PF00665 rve Integrase core domain 3.4E-08 187 287
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-48 611 790
Agabi119p4|694900 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.5E-19 119 175
PF00665 rve Integrase core domain 4.0E-12 193 289
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.9E-10 489 538
Agabi119p4|695150 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-09 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.1E-20 186 242
PF00665 rve Integrase core domain 1.2E-11 260 354
Agabi119p4|696300 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.9E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.4E-37 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|701300 PF13650 Asp_protease_2 Aspartyl protease 5.9E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.8E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.6E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.4E-19 724 780
PF00665 rve Integrase core domain 4.4E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-07 1094 1134
Agabi119p4|707800 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-69 1167 1404
Agabi119p4|707850 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 2.6E-13 96 209
PF13976 gag_pre-integrs GAG-pre-integrase domain 4.9E-07 475 519
PF00665 rve Integrase core domain 5.6E-12 534 630
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-67 909 1154
Agabi119p4|708100 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.2E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-08 1009 1059
PF00665 rve Integrase core domain 2.5E-13 1073 1170
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.3E-65 1593 1824
Agabi119p4|708450 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.8E-07 7 101
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.4E-08 917 967
PF00665 rve Integrase core domain 2.4E-13 981 1078
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-65 1501 1732
Agabi119p4|708800 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.1E-19 377 433
PF00665 rve Integrase core domain 2.5E-12 451 547
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.3E-08 747 787
Agabi119p4|710650 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 7.6E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 7.3E-08 590 639
PF00665 rve Integrase core domain 6.5E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-68 1167 1404
Agabi119p4|711450 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.3E-08 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-69 1167 1404
Agabi119p4|717100 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-31 12 101
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-37 33 135
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.3E-16 229 284
PF00665 rve Integrase core domain 1.2E-13 302 398
Agabi119p4|717400 PF13650 Asp_protease_2 Aspartyl protease 5.7E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.7E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 2.1E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.1E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|718150 PF00665 rve Integrase core domain 5.8E-08 44 144
Agabi119p4|719100 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.3E-08 413 463
PF00665 rve Integrase core domain 5.8E-12 477 574
Agabi119p4|719400 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 119 175
PF00665 rve Integrase core domain 6.3E-12 197 289
Agabi119p4|723850 PF17921 Integrase_H2C2 Integrase zinc binding domain 3.9E-19 80 136
PF00665 rve Integrase core domain 1.7E-12 154 250
Agabi119p4|724150 PF17921 Integrase_H2C2 Integrase zinc binding domain 3.9E-19 80 136
PF00665 rve Integrase core domain 1.7E-12 154 250
Agabi119p4|725200 PF13650 Asp_protease_2 Aspartyl protease 2.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.4E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 8.2E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|725300 PF03732 Retrotrans_gag Retrotransposon gag protein 6.3E-07 57 127
PF00098 zf-CCHC Zinc knuckle 3.6E-04 235 250
PF13650 Asp_protease_2 Aspartyl protease 2.8E-07 293 383
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 9.0E-08 294 385
PF08284 RVP_2 Retroviral aspartyl protease 9.0E-10 301 400
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.7E-18 523 682
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.0E-37 748 844
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.0E-37 776 878
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-18 992 1048
PF00665 rve Integrase core domain 5.4E-12 1066 1162
Agabi119p4|725700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-19 78 237
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 303 399
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.9E-38 331 433
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.2E-19 547 603
PF00665 rve Integrase core domain 6.5E-08 621 702
Agabi119p4|729900 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.4E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1094 1143
Agabi119p4|731500 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.4E-38 115 211
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-38 143 245
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 359 415
PF00665 rve Integrase core domain 5.4E-12 433 529
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.7E-10 729 778
Agabi119p4|731750 PF13650 Asp_protease_2 Aspartyl protease 1.2E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.9E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 2.2E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-28 477 557
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.9E-30 489 575
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.4E-19 655 711
PF00665 rve Integrase core domain 9.6E-12 729 825
Agabi119p4|732300 PF17921 Integrase_H2C2 Integrase zinc binding domain 4.5E-18 80 136
PF00665 rve Integrase core domain 1.9E-11 154 250
Agabi119p4|734300 PF13976 gag_pre-integrs GAG-pre-integrase domain 1.4E-10 281 348
PF00665 rve Integrase core domain 1.7E-08 362 462
Agabi119p4|734900 PF13976 gag_pre-integrs GAG-pre-integrase domain 4.8E-07 157 201
PF00665 rve Integrase core domain 3.1E-08 217 312
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.6E-42 682 809
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-13 815 897
Agabi119p4|740950 PF13650 Asp_protease_2 Aspartyl protease 8.8E-07 25 114
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.7E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.4E-08 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.1E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|741150 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
Agabi119p4|742800 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.6E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 8.2E-08 590 639
PF00665 rve Integrase core domain 7.3E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-52 1186 1383
Agabi119p4|743350 PF13650 Asp_protease_2 Aspartyl protease 7.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.8E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 3.4E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-16 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.8E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 4.2E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.3E-10 1094 1144
Agabi119p4|743650 PF13650 Asp_protease_2 Aspartyl protease 7.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.8E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 3.4E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.5E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.1E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|744800 PF17921 Integrase_H2C2 Integrase zinc binding domain 5.9E-20 27 83
PF00665 rve Integrase core domain 7.0E-12 101 197
Agabi119p4|745750 PF00665 rve Integrase core domain 2.1E-12 25 121
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.7E-10 321 370
Agabi119p4|752250 PF13650 Asp_protease_2 Aspartyl protease 4.0E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.8E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 3.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.9E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.6E-18 724 780
PF00665 rve Integrase core domain 4.4E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.3E-08 1094 1134
Agabi119p4|756950 PF13650 Asp_protease_2 Aspartyl protease 2.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.1E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-18 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
Agabi119p4|758250 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 8.8E-11 72 199
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.7E-07 590 639
PF00665 rve Integrase core domain 7.4E-14 652 750
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-69 1167 1404
Agabi119p4|758450 PF13650 Asp_protease_2 Aspartyl protease 5.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 4.5E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 3.2E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.1E-19 704 760
PF00665 rve Integrase core domain 1.2E-11 778 874
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-07 1074 1114
Agabi119p4|758600 PF13976 gag_pre-integrs GAG-pre-integrase domain 7.4E-08 435 484
PF00665 rve Integrase core domain 6.6E-14 497 595
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-69 1012 1249
Agabi119p4|760950 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-19 73 232
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-37 298 394
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-38 326 428
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-18 542 598
PF00665 rve Integrase core domain 1.2E-11 616 712
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.6E-10 912 961
Agabi119p4|762200 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 9.2E-08 78 193
PF13976 gag_pre-integrs GAG-pre-integrase domain 3.5E-08 1009 1059
PF00665 rve Integrase core domain 6.6E-13 1073 1170
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-65 1593 1824
Agabi119p4|762350 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.8E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-19 377 433
PF00665 rve Integrase core domain 7.1E-12 451 547
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.6E-10 747 796
Agabi119p4|763650 PF13650 Asp_protease_2 Aspartyl protease 3.4E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.6E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 6.8E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.1E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 1094 1143
Agabi119p4|764450 PF13650 Asp_protease_2 Aspartyl protease 2.6E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.9E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.0E-19 724 780
PF00665 rve Integrase core domain 4.4E-12 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-07 1094 1134
Agabi119p4|768000 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.1E-08 44 151
PF13976 gag_pre-integrs GAG-pre-integrase domain 1.9E-08 972 1022
PF00665 rve Integrase core domain 1.3E-13 1036 1133
Agabi119p4|769750 PF08284 RVP_2 Retroviral aspartyl protease 4.1E-09 2 97
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.8E-19 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 414 510
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 442 544
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.9E-19 658 714
PF00665 rve Integrase core domain 1.1E-11 732 828
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.9E-10 1028 1077
Agabi119p4|769900 PF13650 Asp_protease_2 Aspartyl protease 2.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.1E-37 461 557
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 489 591
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.1E-19 705 761
PF00665 rve Integrase core domain 1.0E-12 779 875
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.6E-09 1075 1124
Agabi119p4|770050 PF13650 Asp_protease_2 Aspartyl protease 2.6E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 7.8E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.4E-09 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-17 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-37 461 557
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-38 489 591
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.6E-19 705 761
PF00665 rve Integrase core domain 5.8E-12 779 875
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-07 1075 1115
Agabi119p4|770850 PF13976 gag_pre-integrs GAG-pre-integrase domain 2.9E-08 180 223
PF00665 rve Integrase core domain 8.4E-10 239 335
PF07727 RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-42 717 837
Agabi119p4|771800 PF00665 rve Integrase core domain 3.8E-09 15 115
Agabi119p4|772400 PF08284 RVP_2 Retroviral aspartyl protease 2.3E-08 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.4E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-37 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 9.1E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.8E-10 1094 1143
Agabi119p4|773050 PF13650 Asp_protease_2 Aspartyl protease 1.8E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.9E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 7.0E-10 33 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.9E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 724 780
PF00665 rve Integrase core domain 7.3E-12 798 894

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