Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00270
Short nameDEAD
Long nameDEAD/DEAH box helicase
Proteins with at least one of this domain61
Total domain count65
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Agabi119p4|004600 PF00270 DEAD DEAD/DEAH box helicase 1.5E-12 560 711
PF00271 Helicase_C Helicase conserved C-terminal domain 7.9E-13 794 921
PF04408 HA2 Helicase associated domain (HA2) 2.9E-17 987 1067
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 1.8E-13 1148 1248
Agabi119p4|005360 PF17911 Ski2_N Ski2 N-terminal region 2.8E-29 61 178
PF00270 DEAD DEAD/DEAH box helicase 5.2E-18 280 428
PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-05 292 426
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-05 623 702
PF13234 rRNA_proc-arch rRNA-processing arch domain 1.5E-29 757 1033
PF08148 DSHCT DSHCT (NUC185) domain 2.9E-50 1059 1226
Agabi119p4|006000 PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-18 30 203
PF00270 DEAD DEAD/DEAH box helicase 4.0E-14 33 203
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-15 284 381
Agabi119p4|006500 PF00035 dsrm Double-stranded RNA binding motif 1.7E-04 247 308
PF00270 DEAD DEAD/DEAH box helicase 3.1E-07 425 590
PF00271 Helicase_C Helicase conserved C-terminal domain 2.9E-14 692 823
PF04408 HA2 Helicase associated domain (HA2) 1.1E-16 889 962
Agabi119p4|006690 PF00270 DEAD DEAD/DEAH box helicase 9.6E-49 218 390
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-27 432 536
Agabi119p4|007710 PF00270 DEAD DEAD/DEAH box helicase 6.0E-06 643 807
PF00271 Helicase_C Helicase conserved C-terminal domain 3.3E-15 929 1051
PF04408 HA2 Helicase associated domain (HA2) 9.7E-15 1119 1196
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 9.5E-10 1297 1378
Agabi119p4|009090 PF00270 DEAD DEAD/DEAH box helicase 9.2E-37 81 248
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-08 96 244
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-25 288 395
Agabi119p4|009110 PF00270 DEAD DEAD/DEAH box helicase 4.6E-34 138 312
PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-06 152 306
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-23 362 458
Agabi119p4|009620 PF00270 DEAD DEAD/DEAH box helicase 5.6E-17 89 249
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-06 510 559
Agabi119p4|011560 PF00270 DEAD DEAD/DEAH box helicase 1.6E-17 211 370
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-19 222 367
PF00271 Helicase_C Helicase conserved C-terminal domain 1.9E-18 578 682
Agabi119p4|012020 PF00270 DEAD DEAD/DEAH box helicase 1.4E-08 564 712
PF00271 Helicase_C Helicase conserved C-terminal domain 8.3E-12 754 884
PF04408 HA2 Helicase associated domain (HA2) 7.1E-21 947 1034
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 2.6E-14 1092 1168
Agabi119p4|015300 PF00270 DEAD DEAD/DEAH box helicase 8.9E-15 196 363
PF00271 Helicase_C Helicase conserved C-terminal domain 6.5E-12 422 527
PF16124 RecQ_Zn_bind RecQ zinc-binding 6.4E-10 540 610
Agabi119p4|015590 PF00270 DEAD DEAD/DEAH box helicase 5.8E-34 111 322
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-16 380 486
Agabi119p4|020090 PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-14 16 190
PF00270 DEAD DEAD/DEAH box helicase 1.3E-13 18 151
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-15 382 514
PF03368 Dicer_dimer Dicer dimerisation domain 3.1E-23 588 694
PF00636 Ribonuclease_3 Ribonuclease III domain 4.2E-18 1031 1169
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 4.2E-12 1224 1296
PF00636 Ribonuclease_3 Ribonuclease III domain 1.2E-17 1246 1392
Agabi119p4|042540 PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-05 148 321
PF00270 DEAD DEAD/DEAH box helicase 2.0E-39 150 374
PF00271 Helicase_C Helicase conserved C-terminal domain 7.3E-17 518 600
PF13959 DUF4217 Domain of unknown function (DUF4217) 3.7E-19 666 727
Agabi119p4|044400 PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-11 337 510
PF00176 SNF2-rel_dom SNF2-related domain 1.7E-57 340 624
PF00270 DEAD DEAD/DEAH box helicase 5.8E-07 359 514
PF00271 Helicase_C Helicase conserved C-terminal domain 3.8E-14 689 799
Agabi119p4|046310 PF00270 DEAD DEAD/DEAH box helicase 1.2E-38 122 309
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-22 392 487
PF08147 DBP10CT DBP10CT (NUC160) domain 8.1E-19 748 809
Agabi119p4|052830 PF00270 DEAD DEAD/DEAH box helicase 1.5E-45 48 211
PF04851 ResIII Type III restriction enzyme, res subunit 3.9E-06 61 206
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-31 249 357
Agabi119p4|056060 PF00270 DEAD DEAD/DEAH box helicase 8.5E-24 191 359
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-09 199 356
PF00271 Helicase_C Helicase conserved C-terminal domain 3.0E-09 425 559
PF02889 Sec63 Sec63 Brl domain 1.2E-29 678 992
Agabi119p4|058180 PF00270 DEAD DEAD/DEAH box helicase 4.8E-46 308 505
PF00271 Helicase_C Helicase conserved C-terminal domain 6.4E-29 541 650
Agabi119p4|059280 PF08839 CDT1 DNA replication factor CDT1 like 1.1E-06 49 109
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-06 301 473
PF00270 DEAD DEAD/DEAH box helicase 1.4E-22 303 475
PF00271 Helicase_C Helicase conserved C-terminal domain 2.5E-14 537 644
PF09369 MZB MrfA Zn-binding domain 1.1E-14 907 988
Agabi119p4|059710 PF00270 DEAD DEAD/DEAH box helicase 1.6E-44 202 382
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-05 222 377
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-25 418 525
Agabi119p4|059730 PF00270 DEAD DEAD/DEAH box helicase 1.7E-18 291 455
PF00271 Helicase_C Helicase conserved C-terminal domain 5.2E-18 498 603
PF16124 RecQ_Zn_bind RecQ zinc-binding 2.8E-13 617 686
PF09382 RQC RQC domain 1.9E-14 690 799
Agabi119p4|060690 PF00270 DEAD DEAD/DEAH box helicase 2.8E-06 56 200
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-12 250 376
PF04408 HA2 Helicase associated domain (HA2) 1.7E-14 438 527
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 3.3E-11 585 661
PF07956 DUF1690 Protein of Unknown function (DUF1690) 1.6E-38 682 835
Agabi119p4|062200 PF00270 DEAD DEAD/DEAH box helicase 2.4E-47 41 208
PF04851 ResIII Type III restriction enzyme, res subunit 8.4E-06 57 201
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-30 242 351
Agabi119p4|062230 PF04851 ResIII Type III restriction enzyme, res subunit 5.8E-15 15 180
PF00270 DEAD DEAD/DEAH box helicase 6.5E-16 18 157
PF00271 Helicase_C Helicase conserved C-terminal domain 3.8E-16 360 480
PF03368 Dicer_dimer Dicer dimerisation domain 4.0E-13 564 648
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 1.6E-09 981 1096
PF00636 Ribonuclease_3 Ribonuclease III domain 2.5E-20 983 1093
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 4.7E-15 1145 1281
PF00636 Ribonuclease_3 Ribonuclease III domain 4.1E-18 1167 1279
Agabi119p4|069860 PF00270 DEAD DEAD/DEAH box helicase 4.4E-43 48 210
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-31 249 357
Agabi119p4|070010 PF00270 DEAD DEAD/DEAH box helicase 5.2E-23 11 157
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-21 210 329
PF13959 DUF4217 Domain of unknown function (DUF4217) 7.0E-19 392 445
Agabi119p4|071510 PF00270 DEAD DEAD/DEAH box helicase 7.8E-25 270 452
PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-10 282 451
PF02889 Sec63 Sec63 Brl domain 7.6E-77 779 1081
PF00270 DEAD DEAD/DEAH box helicase 1.2E-06 1128 1268
Agabi119p4|071590 PF00270 DEAD DEAD/DEAH box helicase 7.0E-40 296 442
PF00271 Helicase_C Helicase conserved C-terminal domain 3.9E-24 473 570
Agabi119p4|073420 PF00270 DEAD DEAD/DEAH box helicase 3.8E-17 132 194
PF00270 DEAD DEAD/DEAH box helicase 1.4E-11 197 263
PF00271 Helicase_C Helicase conserved C-terminal domain 5.0E-25 353 450
Agabi119p4|073460 PF00270 DEAD DEAD/DEAH box helicase 1.0E-17 459 683
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-07 766 874
Agabi119p4|080570 PF00270 DEAD DEAD/DEAH box helicase 8.2E-36 91 257
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-25 298 413
Agabi119p4|082540 PF00270 DEAD DEAD/DEAH box helicase 1.8E-50 122 293
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-05 138 286
PF00271 Helicase_C Helicase conserved C-terminal domain 4.9E-30 330 439
Agabi119p4|082880 PF00270 DEAD DEAD/DEAH box helicase 9.8E-39 195 416
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-08 206 343
PF00271 Helicase_C Helicase conserved C-terminal domain 6.2E-21 470 586
Agabi119p4|088320 PF18149 Helicase_PWI N-terminal helicase PWI domain 3.2E-35 279 385
PF00270 DEAD DEAD/DEAH box helicase 7.6E-27 498 674
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-15 510 672
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-08 730 874
PF02889 Sec63 Sec63 Brl domain 6.9E-90 996 1300
PF00270 DEAD DEAD/DEAH box helicase 2.2E-21 1345 1506
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-06 1348 1472
PF02889 Sec63 Sec63 Brl domain 1.5E-65 1830 2141
Agabi119p4|094920 PF00270 DEAD DEAD/DEAH box helicase 2.1E-39 38 224
PF04851 ResIII Type III restriction enzyme, res subunit 3.8E-05 50 184
PF00271 Helicase_C Helicase conserved C-terminal domain 8.6E-28 260 468
Agabi119p4|099290 PF00270 DEAD DEAD/DEAH box helicase 2.1E-07 116 277
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-13 322 449
PF04408 HA2 Helicase associated domain (HA2) 8.2E-20 510 598
Agabi119p4|102200 PF00270 DEAD DEAD/DEAH box helicase 1.1E-05 469 619
PF00271 Helicase_C Helicase conserved C-terminal domain 2.8E-14 666 793
PF04408 HA2 Helicase associated domain (HA2) 5.3E-22 855 944
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 4.9E-19 1004 1084
Agabi119p4|104310 PF00270 DEAD DEAD/DEAH box helicase 9.1E-18 25 190
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-16 240 350
PF16124 RecQ_Zn_bind RecQ zinc-binding 3.2E-09 390 443
Agabi119p4|110790 PF00270 DEAD DEAD/DEAH box helicase 3.3E-19 139 218
PF00270 DEAD DEAD/DEAH box helicase 2.4E-17 262 385
PF00271 Helicase_C Helicase conserved C-terminal domain 7.1E-27 452 558
Agabi119p4|116560 PF00270 DEAD DEAD/DEAH box helicase 3.1E-46 82 252
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-23 293 402
PF13959 DUF4217 Domain of unknown function (DUF4217) 9.8E-22 444 504
PF13347 MFS_2 MFS/sugar transport protein 1.4E-07 889 1197
Agabi119p4|563750 PF00270 DEAD DEAD/DEAH box helicase 1.4E-44 95 267
PF00271 Helicase_C Helicase conserved C-terminal domain 2.9E-23 309 413
PF13959 DUF4217 Domain of unknown function (DUF4217) 4.8E-17 453 513
PF03661 TMEM33_Pom33 Transmembrane protein 33/Nucleoporin POM33 3.0E-38 648 886
Agabi119p4|563850 PF00270 DEAD DEAD/DEAH box helicase 8.2E-47 249 429
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-29 485 584
Agabi119p4|575050 PF00270 DEAD DEAD/DEAH box helicase 1.2E-19 35 198
PF00271 Helicase_C Helicase conserved C-terminal domain 9.2E-11 258 353
Agabi119p4|595050 PF00270 DEAD DEAD/DEAH box helicase 5.8E-08 1142 1294
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-19 1345 1437
Agabi119p4|595250 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 2.0E-08 157 258
PF00270 DEAD DEAD/DEAH box helicase 1.1E-09 1007 1158
PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-05 1016 1154
PF00271 Helicase_C Helicase conserved C-terminal domain 5.0E-09 1207 1307
Agabi119p4|595400 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 2.2E-06 201 298
PF00270 DEAD DEAD/DEAH box helicase 2.4E-06 1116 1270
PF00271 Helicase_C Helicase conserved C-terminal domain 1.5E-13 1320 1412
Agabi119p4|595900 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 1.9E-08 84 185
PF00270 DEAD DEAD/DEAH box helicase 1.0E-09 934 1085
PF04851 ResIII Type III restriction enzyme, res subunit 3.2E-05 943 1081
PF00271 Helicase_C Helicase conserved C-terminal domain 3.1E-09 1134 1234
Agabi119p4|624100 PF00270 DEAD DEAD/DEAH box helicase 1.5E-18 35 202
PF00271 Helicase_C Helicase conserved C-terminal domain 9.3E-17 255 359
Agabi119p4|668750 PF00270 DEAD DEAD/DEAH box helicase 3.1E-46 190 375
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-29 412 523
Agabi119p4|687800 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 3.6E-08 150 251
PF00270 DEAD DEAD/DEAH box helicase 9.6E-10 1000 1151
PF04851 ResIII Type III restriction enzyme, res subunit 3.0E-05 1009 1147
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-09 1200 1300
Agabi119p4|688000 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 1.6E-08 150 251
PF00270 DEAD DEAD/DEAH box helicase 8.0E-10 1000 1151
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-05 1009 1147
PF00271 Helicase_C Helicase conserved C-terminal domain 2.6E-09 1200 1300
Agabi119p4|700050 PF00270 DEAD DEAD/DEAH box helicase 1.5E-18 35 202
PF00271 Helicase_C Helicase conserved C-terminal domain 9.3E-17 255 359
Agabi119p4|701650 PF03937 Sdh5 Flavinator of succinate dehydrogenase 2.6E-11 1 46
PF00270 DEAD DEAD/DEAH box helicase 6.9E-42 134 297
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-26 335 441
Agabi119p4|706250 PF00270 DEAD DEAD/DEAH box helicase 7.0E-07 1106 1257
PF00271 Helicase_C Helicase conserved C-terminal domain 7.4E-13 1307 1398
Agabi119p4|746500 PF12013 OrsD Orsellinic acid/F9775 biosynthesis cluster protein D 2.0E-08 150 251
PF00270 DEAD DEAD/DEAH box helicase 2.2E-09 1000 1151
PF04851 ResIII Type III restriction enzyme, res subunit 2.8E-05 1009 1147
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-09 1200 1300
Agabi119p4|759100 PF00270 DEAD DEAD/DEAH box helicase 2.7E-08 65 215
PF00271 Helicase_C Helicase conserved C-terminal domain 5.4E-09 267 404
PF04408 HA2 Helicase associated domain (HA2) 3.7E-20 467 554
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 1.4E-18 616 690
Agabi119p4|763550 PF00270 DEAD DEAD/DEAH box helicase 1.8E-17 35 198
PF00271 Helicase_C Helicase conserved C-terminal domain 5.0E-16 256 359
Agabi119p4|766150 PF00270 DEAD DEAD/DEAH box helicase 7.9E-17 144 291
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-06 435 540
PF13234 rRNA_proc-arch rRNA-processing arch domain 7.0E-89 594 864
PF08148 DSHCT DSHCT (NUC185) domain 4.2E-51 892 1056
Agabi119p4|777900 PF00270 DEAD DEAD/DEAH box helicase 1.2E-20 188 470
PF08284 RVP_2 Retroviral aspartyl protease 1.6E-04 1252 1345
PF13650 Asp_protease_2 Aspartyl protease 7.3E-07 1252 1334
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 9.6E-08 1252 1337
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-22 1521 1682
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.4E-20 1748 1851
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-28 1781 1881
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.1E-13 2017 2067

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