Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00158
Short nameSigma54_activat
Long nameSigma-54 interaction domain
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Agabi119p4|006450 PF02861 Clp_N Clp amino terminal domain, pathogenicity island component 3.8E-12 110 160
PF00004 AAA ATPase family associated with various cellular activities (AAA) 6.4E-13 218 354
PF17871 AAA_lid_9 AAA lid domain 1.5E-32 362 462
PF07724 AAA_2 AAA domain (Cdc48 subfamily) 1.1E-47 618 783
PF00158 Sigma54_activat Sigma-54 interaction domain 8.9E-07 621 739
PF07728 AAA_5 AAA domain (dynein-related subfamily) 9.9E-08 623 749
PF00004 AAA ATPase family associated with various cellular activities (AAA) 2.9E-09 624 742
PF10431 ClpB_D2-small C-terminal, D2-small domain, of ClpB protein 2.5E-21 789 869
Agabi119p4|045450 PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 5.7E-17 124 243
PF00004 AAA ATPase family associated with various cellular activities (AAA) 6.8E-15 157 263
PF07728 AAA_5 AAA domain (dynein-related subfamily) 6.3E-05 157 249
PF00158 Sigma54_activat Sigma-54 interaction domain 2.8E-04 211 257
PF16193 AAA_assoc_2 AAA C-terminal domain 8.3E-18 303 374
PF12002 MgsA_C MgsA AAA+ ATPase C terminal 2.8E-58 375 526
Agabi119p4|659700 PF00004 AAA ATPase family associated with various cellular activities (AAA) 3.8E-10 97 197
PF17871 AAA_lid_9 AAA lid domain 8.4E-32 236 333
PF07724 AAA_2 AAA domain (Cdc48 subfamily) 1.7E-46 493 661
PF00158 Sigma54_activat Sigma-54 interaction domain 1.4E-05 496 600
PF07728 AAA_5 AAA domain (dynein-related subfamily) 5.8E-12 498 610
PF00004 AAA ATPase family associated with various cellular activities (AAA) 6.8E-07 499 617
PF10431 ClpB_D2-small C-terminal, D2-small domain, of ClpB protein 6.3E-19 667 747

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