Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00098
Short namezf-CCHC
Long nameZinc knuckle
Proteins with at least one of this domain113
Total domain count179
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Agabi119p4|007400 PF00642 zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) 3.4E-05 94 113
PF00642 zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) 4.0E-05 120 144
PF00098 zf-CCHC Zinc knuckle 5.0E-04 254 269
PF01894 UPF0047 Uncharacterised protein family UPF0047 3.5E-37 315 431
Agabi119p4|009380 PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.8E-13 88 150
PF13917 zf-CCHC_3 Zinc knuckle 3.2E-06 165 195
PF00098 zf-CCHC Zinc knuckle 4.6E-08 169 185
Agabi119p4|039440 PF01751 Toprim Toprim domain 2.8E-18 3 146
PF01131 Topoisom_bac DNA topoisomerase 2.9E-105 162 579
PF06839 zf-GRF GRF zinc finger 2.0E-13 809 852
PF00098 zf-CCHC Zinc knuckle 4.5E-06 874 890
PF13917 zf-CCHC_3 Zinc knuckle 1.3E-02 875 900
PF00098 zf-CCHC Zinc knuckle 3.6E-04 918 933
PF13917 zf-CCHC_3 Zinc knuckle 1.5E-01 944 972
PF00098 zf-CCHC Zinc knuckle 1.9E-04 948 964
Agabi119p4|056220 PF13696 zf-CCHC_2 Zinc knuckle 3.7E-10 370 389
PF00098 zf-CCHC Zinc knuckle 4.2E-03 375 390
PF04677 CwfJ_C_1 Protein similar to CwfJ C-terminus 1 1.9E-28 440 573
PF04676 CwfJ_C_2 Protein similar to CwfJ C-terminus 2 3.2E-11 603 670
Agabi119p4|072660 PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5.2E-13 80 142
PF00098 zf-CCHC Zinc knuckle 3.0E-08 161 177
Agabi119p4|073080 PF00098 zf-CCHC Zinc knuckle 5.8E-04 343 356
Agabi119p4|073220 PF00098 zf-CCHC Zinc knuckle 3.6E-05 9 24
PF14392 zf-CCHC_4 Zinc knuckle 9.5E-01 10 24
PF14392 zf-CCHC_4 Zinc knuckle 1.4E-01 27 44
PF00098 zf-CCHC Zinc knuckle 1.9E-03 29 45
PF00098 zf-CCHC Zinc knuckle 6.6E-06 53 69
PF14392 zf-CCHC_4 Zinc knuckle 1.8E-01 54 68
PF00098 zf-CCHC Zinc knuckle 8.1E-07 78 95
PF14392 zf-CCHC_4 Zinc knuckle 9.7E-02 80 94
PF00098 zf-CCHC Zinc knuckle 5.1E-06 123 137
PF14392 zf-CCHC_4 Zinc knuckle 9.2E+00 124 138
PF00098 zf-CCHC Zinc knuckle 5.9E-09 159 176
Agabi119p4|083540 PF16275 SF1-HH Splicing factor 1 helix-hairpin domain 9.2E-39 79 186
PF00013 KH_1 KH domain 5.1E-05 209 279
PF00098 zf-CCHC Zinc knuckle 1.3E-04 317 333
PF00098 zf-CCHC Zinc knuckle 1.2E-05 342 357
Agabi119p4|087200 PF00098 zf-CCHC Zinc knuckle 4.9E-03 207 222
Agabi119p4|092670 PF08783 DWNN DWNN domain 1.1E-30 5 78
PF13696 zf-CCHC_2 Zinc knuckle 1.5E-10 207 227
PF00098 zf-CCHC Zinc knuckle 1.1E-05 211 226
Agabi119p4|557650 PF03732 Retrotrans_gag Retrotransposon gag protein 7.0E-09 72 143
PF00098 zf-CCHC Zinc knuckle 4.6E-03 223 237
PF00098 zf-CCHC Zinc knuckle 9.3E-06 251 266
Agabi119p4|557700 PF03732 Retrotrans_gag Retrotransposon gag protein 2.5E-06 109 196
PF00098 zf-CCHC Zinc knuckle 3.1E-06 282 297
Agabi119p4|557850 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|563250 PF03732 Retrotrans_gag Retrotransposon gag protein 1.1E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|564550 PF03732 Retrotrans_gag Retrotransposon gag protein 7.1E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296
Agabi119p4|564900 PF00098 zf-CCHC Zinc knuckle 3.0E-06 266 281
Agabi119p4|565450 PF03732 Retrotrans_gag Retrotransposon gag protein 4.4E-09 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|565850 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|568250 PF03732 Retrotrans_gag Retrotransposon gag protein 2.1E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.5E-03 322 335
Agabi119p4|568350 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|584750 PF03732 Retrotrans_gag Retrotransposon gag protein 5.0E-05 134 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296
Agabi119p4|584900 PF00098 zf-CCHC Zinc knuckle 5.4E-04 288 303
Agabi119p4|597200 PF00098 zf-CCHC Zinc knuckle 6.4E-04 79 91
PF13917 zf-CCHC_3 Zinc knuckle 2.8E-01 110 132
PF00098 zf-CCHC Zinc knuckle 1.0E-06 113 129
PF00098 zf-CCHC Zinc knuckle 5.4E-07 142 159
PF13917 zf-CCHC_3 Zinc knuckle 2.7E-01 161 186
PF00098 zf-CCHC Zinc knuckle 1.8E-07 162 178
PF13917 zf-CCHC_3 Zinc knuckle 9.9E-03 180 199
PF00098 zf-CCHC Zinc knuckle 1.2E-06 183 198
Agabi119p4|604550 PF03732 Retrotrans_gag Retrotransposon gag protein 1.8E-05 12 78
PF00098 zf-CCHC Zinc knuckle 1.8E-06 164 179
Agabi119p4|608650 PF03732 Retrotrans_gag Retrotransposon gag protein 2.4E-08 145 215
PF00098 zf-CCHC Zinc knuckle 5.9E-03 295 309
PF00098 zf-CCHC Zinc knuckle 1.2E-05 323 338
Agabi119p4|608750 PF03732 Retrotrans_gag Retrotransposon gag protein 2.4E-08 145 215
PF00098 zf-CCHC Zinc knuckle 5.9E-03 295 309
PF00098 zf-CCHC Zinc knuckle 1.2E-05 323 338
Agabi119p4|616600 PF03732 Retrotrans_gag Retrotransposon gag protein 8.4E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296
Agabi119p4|616800 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|628500 PF03732 Retrotrans_gag Retrotransposon gag protein 1.4E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|637300 PF03732 Retrotrans_gag Retrotransposon gag protein 4.1E-08 143 214
PF00098 zf-CCHC Zinc knuckle 3.1E-05 302 317
PF13650 Asp_protease_2 Aspartyl protease 1.6E-07 359 449
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 4.7E-08 360 451
PF08284 RVP_2 Retroviral aspartyl protease 7.0E-10 367 466
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.2E-19 589 748
Agabi119p4|637800 PF03732 Retrotrans_gag Retrotransposon gag protein 1.3E-08 143 214
PF00098 zf-CCHC Zinc knuckle 6.1E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|640400 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.0E-05 322 337
Agabi119p4|641650 PF03732 Retrotrans_gag Retrotransposon gag protein 3.1E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-04 322 337
Agabi119p4|643250 PF03732 Retrotrans_gag Retrotransposon gag protein 6.6E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.7E-05 322 337
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-19 568 727
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 793 889
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.8E-38 821 923
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.9E-19 1037 1093
PF00665 rve Integrase core domain 1.6E-09 1111 1207
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-09 1407 1456
Agabi119p4|645200 PF03732 Retrotrans_gag Retrotransposon gag protein 1.9E-08 73 143
PF00098 zf-CCHC Zinc knuckle 4.6E-03 223 237
PF00098 zf-CCHC Zinc knuckle 9.5E-05 251 266
Agabi119p4|646350 PF03732 Retrotrans_gag Retrotransposon gag protein 1.6E-05 107 194
PF00098 zf-CCHC Zinc knuckle 3.1E-06 280 295
Agabi119p4|647800 PF03732 Retrotrans_gag Retrotransposon gag protein 7.5E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.7E-06 281 296
Agabi119p4|647900 PF00098 zf-CCHC Zinc knuckle 5.4E-04 288 303
Agabi119p4|649500 PF03732 Retrotrans_gag Retrotransposon gag protein 2.5E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296
Agabi119p4|654200 PF03732 Retrotrans_gag Retrotransposon gag protein 7.1E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296
Agabi119p4|656200 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|656500 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|667400 PF00098 zf-CCHC Zinc knuckle 1.7E-05 261 276
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.1E-22 789 950
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.2E-26 995 1093
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.2E-31 1019 1124
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.5E-19 1238 1296
Agabi119p4|667500 PF03732 Retrotrans_gag Retrotransposon gag protein 4.3E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.3E-05 322 337
Agabi119p4|669100 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|671800 PF00098 zf-CCHC Zinc knuckle 5.4E-04 288 303
Agabi119p4|672050 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|672850 PF03732 Retrotrans_gag Retrotransposon gag protein 7.1E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296
Agabi119p4|674050 PF03732 Retrotrans_gag Retrotransposon gag protein 1.1E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|685500 PF03732 Retrotrans_gag Retrotransposon gag protein 1.1E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|687900 PF03732 Retrotrans_gag Retrotransposon gag protein 7.2E-06 109 196
PF00098 zf-CCHC Zinc knuckle 3.1E-06 282 297
Agabi119p4|689250 PF03732 Retrotrans_gag Retrotransposon gag protein 7.5E-06 109 196
PF00098 zf-CCHC Zinc knuckle 3.1E-06 282 297
Agabi119p4|692950 PF00098 zf-CCHC Zinc knuckle 8.9E-05 462 477
PF08284 RVP_2 Retroviral aspartyl protease 2.1E-07 857 965
PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 859 948
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.7E-16 1112 1240
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-13 1306 1409
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.0E-22 1340 1440
Agabi119p4|694800 PF03732 Retrotrans_gag Retrotransposon gag protein 7.0E-09 72 143
PF00098 zf-CCHC Zinc knuckle 4.6E-03 223 237
PF00098 zf-CCHC Zinc knuckle 9.3E-06 251 266
Agabi119p4|695000 PF03732 Retrotrans_gag Retrotransposon gag protein 3.0E-05 108 195
PF00098 zf-CCHC Zinc knuckle 8.7E-06 281 296
Agabi119p4|695050 PF00098 zf-CCHC Zinc knuckle 1.8E-06 45 60
Agabi119p4|696250 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.0E-05 322 337
Agabi119p4|701350 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|704200 PF00098 zf-CCHC Zinc knuckle 5.4E-04 288 303
Agabi119p4|708250 PF00098 zf-CCHC Zinc knuckle 5.4E-04 288 303
Agabi119p4|708650 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|709350 PF03732 Retrotrans_gag Retrotransposon gag protein 1.3E-05 246 333
PF00098 zf-CCHC Zinc knuckle 4.7E-06 419 434
Agabi119p4|716600 PF03732 Retrotrans_gag Retrotransposon gag protein 8.2E-09 33 104
PF00098 zf-CCHC Zinc knuckle 1.3E-03 184 200
PF00098 zf-CCHC Zinc knuckle 7.8E-06 212 227
Agabi119p4|717350 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|723950 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-07 144 214
PF00098 zf-CCHC Zinc knuckle 2.0E-03 294 310
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|724050 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|724400 PF03732 Retrotrans_gag Retrotransposon gag protein 2.3E-06 107 194
PF00098 zf-CCHC Zinc knuckle 3.1E-06 280 295
Agabi119p4|724700 PF03732 Retrotrans_gag Retrotransposon gag protein 4.8E-06 100 187
PF00098 zf-CCHC Zinc knuckle 3.0E-06 273 288
Agabi119p4|725150 PF00098 zf-CCHC Zinc knuckle 2.4E-03 102 116
PF00098 zf-CCHC Zinc knuckle 4.8E-06 130 145
Agabi119p4|725300 PF03732 Retrotrans_gag Retrotransposon gag protein 6.3E-07 57 127
PF00098 zf-CCHC Zinc knuckle 3.6E-04 235 250
PF13650 Asp_protease_2 Aspartyl protease 2.8E-07 293 383
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 9.0E-08 294 385
PF08284 RVP_2 Retroviral aspartyl protease 9.0E-10 301 400
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.7E-18 523 682
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.0E-37 748 844
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.0E-37 776 878
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-18 992 1048
PF00665 rve Integrase core domain 5.4E-12 1066 1162
Agabi119p4|725350 PF03732 Retrotrans_gag Retrotransposon gag protein 7.1E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296
Agabi119p4|725450 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|725550 PF03732 Retrotrans_gag Retrotransposon gag protein 1.5E-06 100 187
PF00098 zf-CCHC Zinc knuckle 3.0E-06 273 288
Agabi119p4|725750 PF03732 Retrotrans_gag Retrotransposon gag protein 2.2E-08 104 174
PF00098 zf-CCHC Zinc knuckle 5.2E-03 254 268
PF00098 zf-CCHC Zinc knuckle 1.1E-05 282 297
Agabi119p4|726150 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|726650 PF00098 zf-CCHC Zinc knuckle 2.9E-05 119 134
Agabi119p4|729950 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 145 215
PF00098 zf-CCHC Zinc knuckle 5.9E-03 295 309
PF00098 zf-CCHC Zinc knuckle 1.2E-05 323 338
Agabi119p4|731600 PF03732 Retrotrans_gag Retrotransposon gag protein 5.4E-08 135 215
PF00098 zf-CCHC Zinc knuckle 5.9E-03 295 309
PF00098 zf-CCHC Zinc knuckle 8.3E-05 323 338
Agabi119p4|731800 PF03732 Retrotrans_gag Retrotransposon gag protein 5.6E-09 145 216
PF00098 zf-CCHC Zinc knuckle 5.9E-03 295 309
PF00098 zf-CCHC Zinc knuckle 8.3E-05 323 338
Agabi119p4|732200 PF03732 Retrotrans_gag Retrotransposon gag protein 1.6E-07 132 194
PF00098 zf-CCHC Zinc knuckle 7.2E-04 274 288
PF00098 zf-CCHC Zinc knuckle 1.5E-05 302 317
Agabi119p4|735300 PF03732 Retrotrans_gag Retrotransposon gag protein 7.5E-06 109 196
PF00098 zf-CCHC Zinc knuckle 3.1E-06 282 297
Agabi119p4|740800 PF03732 Retrotrans_gag Retrotransposon gag protein 7.5E-06 109 196
PF00098 zf-CCHC Zinc knuckle 3.1E-06 282 297
Agabi119p4|740900 PF03732 Retrotrans_gag Retrotransposon gag protein 1.1E-08 143 214
PF00098 zf-CCHC Zinc knuckle 2.0E-03 294 310
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|741200 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|742950 PF00098 zf-CCHC Zinc knuckle 9.1E-07 78 93
Agabi119p4|743300 PF03732 Retrotrans_gag Retrotransposon gag protein 1.8E-07 73 143
PF00098 zf-CCHC Zinc knuckle 4.6E-03 223 237
PF00098 zf-CCHC Zinc knuckle 9.3E-06 251 266
Agabi119p4|743700 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|744700 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 2.6E-06 322 337
Agabi119p4|749300 PF00098 zf-CCHC Zinc knuckle 1.7E-05 262 277
PF08284 RVP_2 Retroviral aspartyl protease 2.5E-04 331 431
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-15 824 912
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.4E-30 975 1075
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.5E-34 1001 1106
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.3E-20 1220 1278
Agabi119p4|752300 PF03732 Retrotrans_gag Retrotransposon gag protein 7.0E-09 72 143
PF00098 zf-CCHC Zinc knuckle 4.6E-03 223 237
Agabi119p4|756900 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|758100 PF14223 Retrotran_gag_2 gag-polypeptide of LTR copia-type 1.9E-14 105 237
PF00098 zf-CCHC Zinc knuckle 6.5E-04 294 310
Agabi119p4|758500 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|758750 PF00098 zf-CCHC Zinc knuckle 2.1E-04 280 294
PF08284 RVP_2 Retroviral aspartyl protease 8.6E-05 373 473
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-24 832 993
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 1056 1156
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-33 1082 1187
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-20 1301 1359
Agabi119p4|760650 PF03732 Retrotrans_gag Retrotransposon gag protein 1.4E-08 34 104
PF00098 zf-CCHC Zinc knuckle 7.8E-06 212 227
Agabi119p4|760900 PF00098 zf-CCHC Zinc knuckle 5.4E-04 288 303
Agabi119p4|762250 PF00098 zf-CCHC Zinc knuckle 1.8E-03 102 116
PF00098 zf-CCHC Zinc knuckle 2.1E-05 130 144
Agabi119p4|762900 PF03732 Retrotrans_gag Retrotransposon gag protein 6.6E-06 20 107
PF00098 zf-CCHC Zinc knuckle 2.1E-06 193 208
Agabi119p4|763050 PF03732 Retrotrans_gag Retrotransposon gag protein 7.5E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296
Agabi119p4|763700 PF03732 Retrotrans_gag Retrotransposon gag protein 2.7E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|764500 PF03732 Retrotrans_gag Retrotransposon gag protein 1.5E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|766250 PF03732 Retrotrans_gag Retrotransposon gag protein 7.2E-06 109 196
PF00098 zf-CCHC Zinc knuckle 3.1E-06 282 297
Agabi119p4|769700 PF03732 Retrotrans_gag Retrotransposon gag protein 1.0E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|769950 PF03732 Retrotrans_gag Retrotransposon gag protein 5.3E-08 146 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|770100 PF03732 Retrotrans_gag Retrotransposon gag protein 2.3E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|770950 PF03732 Retrotrans_gag Retrotransposon gag protein 1.2E-05 110 195
PF00098 zf-CCHC Zinc knuckle 2.9E-04 284 299
Agabi119p4|772350 PF03732 Retrotrans_gag Retrotransposon gag protein 1.9E-08 362 433
PF00098 zf-CCHC Zinc knuckle 2.1E-05 541 556
Agabi119p4|773000 PF03732 Retrotrans_gag Retrotransposon gag protein 1.1E-08 143 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|773700 PF00098 zf-CCHC Zinc knuckle 6.0E-06 531 546
Agabi119p4|773800 PF03732 Retrotrans_gag Retrotransposon gag protein 1.7E-07 156 222
PF00098 zf-CCHC Zinc knuckle 9.7E-07 303 320
PF00098 zf-CCHC Zinc knuckle 1.9E-04 326 341
Agabi119p4|778750 PF03732 Retrotrans_gag Retrotransposon gag protein 2.8E-08 144 214
PF00098 zf-CCHC Zinc knuckle 5.9E-03 294 308
PF00098 zf-CCHC Zinc knuckle 1.2E-05 322 337
Agabi119p4|780050 PF03732 Retrotrans_gag Retrotransposon gag protein 1.4E-05 252 339
PF00098 zf-CCHC Zinc knuckle 4.8E-06 425 440
Agabi119p4|786300 PF03732 Retrotrans_gag Retrotransposon gag protein 7.4E-06 108 195
PF00098 zf-CCHC Zinc knuckle 3.1E-06 281 296

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